RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 THPOP40225 353 aa16.21■□□□□ 0.19
ACTB-204ENST00000425660 NSFP46459 744 aaKnown RBP16.21■□□□□ 0.19
ACTB-204ENST00000425660 MYO1EQ12965 1108 aa16.21■□□□□ 0.19
ACTB-204ENST00000425660 TRIM71Q2Q1W2 868 aaKnown RBP16.21■□□□□ 0.19
ACTB-204ENST00000425660 FAM26DQ5JW98 314 aa16.21■□□□□ 0.19
ACTB-204ENST00000425660 MON1BQ7L1V2 547 aa16.21■□□□□ 0.19
ACTB-204ENST00000425660 PHF13Q86YI8 300 aaPredicted RBP16.21■□□□□ 0.19
ACTB-204ENST00000425660 SLC43A3Q8NBI5 491 aa16.21■□□□□ 0.19
ACTB-204ENST00000425660 WHAMMQ8TF30 809 aa16.21■□□□□ 0.19
ACTB-204ENST00000425660 RABGGTAQ92696 567 aa16.21■□□□□ 0.19
ACTB-204ENST00000425660 HES6Q96HZ4 224 aa16.21■□□□□ 0.19
ACTB-204ENST00000425660 ZSWIM1Q9BR11 485 aa16.21■□□□□ 0.19
ACTB-204ENST00000425660 TRAIPQ9BWF2 469 aa16.21■□□□□ 0.19
ACTB-204ENST00000425660 GOLPH3Q9H4A6 298 aa16.21■□□□□ 0.19
ACTB-204ENST00000425660 CTTNBP2NLQ9P2B4 639 aa16.21■□□□□ 0.19
ACTB-204ENST00000425660 TUBGCP4Q9UGJ1 667 aa16.21■□□□□ 0.19
ACTB-204ENST00000425660 PDE2AO00408 941 aaPredicted RBP16.2■□□□□ 0.18
ACTB-204ENST00000425660 CD4P01730 458 aa16.2■□□□□ 0.18
ACTB-204ENST00000425660 CYP3A5P20815 502 aa16.2■□□□□ 0.18
ACTB-204ENST00000425660 CDH5P33151 784 aaPredicted RBP16.2■□□□□ 0.18
ACTB-204ENST00000425660 RAD23BP54727 409 aa16.2■□□□□ 0.18
ACTB-204ENST00000425660 RPS6KA1Q15418 735 aa16.2■□□□□ 0.18
ACTB-204ENST00000425660 ZNF394Q53GI3 561 aa16.2■□□□□ 0.18
ACTB-204ENST00000425660 NAA35Q5VZE5 725 aa16.2■□□□□ 0.18
ACTB-204ENST00000425660 PEX26Q7Z412 305 aa16.2■□□□□ 0.18
ACTB-204ENST00000425660 CPA5Q8WXQ8 436 aa16.2■□□□□ 0.18
ACTB-204ENST00000425660 ZNF653Q96CK0 615 aa16.2■□□□□ 0.18
ACTB-204ENST00000425660 ZNF518BQ9C0D4 1074 aa16.2■□□□□ 0.18
ACTB-204ENST00000425660 SMYD3Q9H7B4 428 aa16.2■□□□□ 0.18
ACTB-204ENST00000425660 TRMT13Q9NUP7 481 aaKnown RBP16.2■□□□□ 0.18
ACTB-204ENST00000425660 WBP1LQ9NX94 342 aa16.2■□□□□ 0.18
ACTB-204ENST00000425660 PACSIN2Q9UNF0 486 aaPredicted RBP16.2■□□□□ 0.18
ACTB-204ENST00000425660 SQORQ9Y6N5 450 aa16.2■□□□□ 0.18
ACTB-204ENST00000425660 XPOTO43592 962 aaKnown RBP16.19■□□□□ 0.18
ACTB-204ENST00000425660 CXCR5P32302 372 aa16.19■□□□□ 0.18
ACTB-204ENST00000425660 RAP1GAPP47736 663 aa16.19■□□□□ 0.18
ACTB-204ENST00000425660 CDH8P55286 799 aa16.19■□□□□ 0.18
ACTB-204ENST00000425660 GLRA4Q5JXX5 417 aa16.19■□□□□ 0.18
ACTB-204ENST00000425660 FBXO47Q5MNV8 452 aa16.19■□□□□ 0.18
ACTB-204ENST00000425660 ARRDC4Q8NCT1 418 aa16.19■□□□□ 0.18
ACTB-204ENST00000425660 TFAP2BQ92481 460 aa16.19■□□□□ 0.18
ACTB-204ENST00000425660 C18orf25Q96B23 403 aaPredicted RBP16.19■□□□□ 0.18
ACTB-204ENST00000425660 CAPZA3Q96KX2 299 aa16.19■□□□□ 0.18
ACTB-204ENST00000425660 PDCL3Q9H2J4 239 aa16.19■□□□□ 0.18
ACTB-204ENST00000425660 AGO3Q9H9G7 860 aaKnown RBP16.19■□□□□ 0.18
ACTB-204ENST00000425660 ERVK-5Q9HDB9 667 aa16.19■□□□□ 0.18
ACTB-204ENST00000425660 FAM105AQ9NUU6 356 aa16.19■□□□□ 0.18
ACTB-204ENST00000425660 PTCH2Q9Y6C5 1203 aa16.19■□□□□ 0.18
ACTB-204ENST00000425660 PIRO00625 290 aa16.19■□□□□ 0.18
ACTB-204ENST00000425660 TNNC1P63316 161 aa16.19■□□□□ 0.18
ACTB-204ENST00000425660 C1QBPQ07021 282 aaKnown RBP16.19■□□□□ 0.18
ACTB-204ENST00000425660 PTP4A2Q12974 167 aa16.19■□□□□ 0.18
ACTB-204ENST00000425660 NFX1Q12986 1120 aaKnown RBP16.19■□□□□ 0.18
ACTB-204ENST00000425660 C9orf57Q5W0N0 161 aa16.19■□□□□ 0.18
ACTB-204ENST00000425660 GPR161Q8N6U8 529 aaKnown RBP16.19■□□□□ 0.18
ACTB-204ENST00000425660 SLC4A11Q8NBS3 891 aa16.19■□□□□ 0.18
ACTB-204ENST00000425660 ZNF564Q8TBZ8 553 aaPredicted RBP16.19■□□□□ 0.18
ACTB-204ENST00000425660 PSMB7Q99436 277 aa16.19■□□□□ 0.18
ACTB-204ENST00000425660 NUP85Q9BW27 656 aa16.19■□□□□ 0.18
ACTB-204ENST00000425660 APOL6Q9BWW8 343 aa16.19■□□□□ 0.18
ACTB-204ENST00000425660 CNOT8Q9UFF9 292 aaKnown RBP16.19■□□□□ 0.18
ACTB-204ENST00000425660 PARP2Q9UGN5 583 aa16.19■□□□□ 0.18
ACTB-204ENST00000425660 BARX2Q9UMQ3 279 aaPredicted RBP16.19■□□□□ 0.18
ACTB-204ENST00000425660 A0A1W2PQ45 241 aaPredicted RBP16.18■□□□□ 0.18
ACTB-204ENST00000425660 A0A1W2PQY0 241 aa16.18■□□□□ 0.18
ACTB-204ENST00000425660 ATMINO43313 823 aaPredicted RBP16.18■□□□□ 0.18
ACTB-204ENST00000425660 MMP8P22894 467 aa16.18■□□□□ 0.18
ACTB-204ENST00000425660 BRD2P25440 801 aaKnown RBP16.18■□□□□ 0.18
ACTB-204ENST00000425660 USP38Q8NB14 1042 aa16.18■□□□□ 0.18
ACTB-204ENST00000425660 TMEM176AQ96HP8 235 aa16.18■□□□□ 0.18
ACTB-204ENST00000425660 RPS6KC1Q96S38 1066 aa16.18■□□□□ 0.18
ACTB-204ENST00000425660 BEGAINQ9BUH8 593 aa16.18■□□□□ 0.18
ACTB-204ENST00000425660 LHX5Q9H2C1 402 aa16.18■□□□□ 0.18
ACTB-204ENST00000425660 AMFRQ9UKV5 643 aa16.18■□□□□ 0.18
ACTB-204ENST00000425660 PADI3Q9ULW8 664 aa16.18■□□□□ 0.18
ACTB-204ENST00000425660 NOD1Q9Y239 953 aa16.18■□□□□ 0.18
ACTB-204ENST00000425660 TRIM17Q9Y577 477 aa16.18■□□□□ 0.18
ACTB-204ENST00000425660 FAM170AA1A519 330 aa16.17■□□□□ 0.18
ACTB-204ENST00000425660 PTGESO14684 152 aa16.17■□□□□ 0.18
ACTB-204ENST00000425660 PPEF2O14830 753 aa16.17■□□□□ 0.18
ACTB-204ENST00000425660 TLR3O15455 904 aaKnown RBP16.17■□□□□ 0.18
ACTB-204ENST00000425660 MED7O43513 233 aa16.17■□□□□ 0.18
ACTB-204ENST00000425660 ZNF623O75123 536 aa16.17■□□□□ 0.18
ACTB-204ENST00000425660 ZSCAN20P17040 1043 aaPredicted RBP16.17■□□□□ 0.18
ACTB-204ENST00000425660 RRM1P23921 792 aa16.17■□□□□ 0.18
ACTB-204ENST00000425660 PNPLA4P41247 253 aa16.17■□□□□ 0.18
ACTB-204ENST00000425660 LPIN1Q14693 890 aa16.17■□□□□ 0.18
ACTB-204ENST00000425660 CFAP221Q4G0U5 840 aa16.17■□□□□ 0.18
ACTB-204ENST00000425660 TEX35Q5T0J7 233 aa16.17■□□□□ 0.18
ACTB-204ENST00000425660 PASD1Q8IV76 773 aa16.17■□□□□ 0.18
ACTB-204ENST00000425660 TMEM35BQ8NCS4 154 aa16.17■□□□□ 0.18
ACTB-204ENST00000425660 PBKQ96KB5 322 aa16.17■□□□□ 0.18
ACTB-204ENST00000425660 TWNKQ96RR1 684 aa16.17■□□□□ 0.18
ACTB-204ENST00000425660 OSBPL7Q9BZF2 842 aa16.17■□□□□ 0.18
ACTB-204ENST00000425660 ELOVL4Q9GZR5 314 aa16.17■□□□□ 0.18
ACTB-204ENST00000425660 KLK14Q9P0G3 267 aa16.17■□□□□ 0.18
ACTB-204ENST00000425660 HMGXB4Q9UGU5 601 aa16.17■□□□□ 0.18
ACTB-204ENST00000425660 PHF24Q9UPV7 400 aa16.17■□□□□ 0.18
ACTB-204ENST00000425660 ALG6Q9Y672 507 aa16.17■□□□□ 0.18
ACTB-204ENST00000425660 PDCD11Q14690 1871 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms