RNA–Protein interactions for RNA: ENST00000425184.5

RBM39-210, Transcript of RNA binding motif protein 39, human

TSL 3

Gene RBM39, Length 526 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-210	ENST00000425184	LNX2	Q8N448	690 aa		4.97	□□□□□ -1.61
RBM39-210	ENST00000425184		Q8NA96	180 aa		4.97	□□□□□ -1.61
RBM39-210	ENST00000425184	C3orf20	Q8ND61	904 aa		4.97	□□□□□ -1.61
RBM39-210	ENST00000425184	IMPG2	Q9BZV3	1241 aa		4.97	□□□□□ -1.61
RBM39-210	ENST00000425184	SYNPO2L	Q9H987	977 aa		4.97	□□□□□ -1.61
RBM39-210	ENST00000425184	SIDT1	Q9NXL6	827 aa	Known RBP	4.97	□□□□□ -1.61
RBM39-210	ENST00000425184	LUC7L2	Q9Y383	392 aa	Known RBP	4.97	□□□□□ -1.61
RBM39-210	ENST00000425184	CARMIL1	Q5VZK9	1371 aa		4.96	□□□□□ -1.62
RBM39-210	ENST00000425184	TNIK	Q9UKE5	1360 aa		4.96	□□□□□ -1.62
RBM39-210	ENST00000425184	PRAMEF33	A0A0G2JMD5	474 aa		4.96	□□□□□ -1.62
RBM39-210	ENST00000425184	F2RL2	O00254	374 aa		4.96	□□□□□ -1.62
RBM39-210	ENST00000425184	SLC16A6	O15403	523 aa		4.96	□□□□□ -1.62
RBM39-210	ENST00000425184	PRAMEF10	O60809	474 aa		4.96	□□□□□ -1.62
RBM39-210	ENST00000425184	IL33	O95760	270 aa		4.96	□□□□□ -1.62
RBM39-210	ENST00000425184	GNAI3	P08754	354 aa		4.96	□□□□□ -1.62
RBM39-210	ENST00000425184	PDC	P20941	246 aa		4.96	□□□□□ -1.62
RBM39-210	ENST00000425184	PLA2G5	P39877	138 aa		4.96	□□□□□ -1.62
RBM39-210	ENST00000425184	ANAPC15	P60006	121 aa		4.96	□□□□□ -1.62
RBM39-210	ENST00000425184	RPS7	P62081	194 aa	Known RBP	4.96	□□□□□ -1.62
RBM39-210	ENST00000425184	GNAI1	P63096	354 aa		4.96	□□□□□ -1.62
RBM39-210	ENST00000425184	MRPS35	P82673	323 aa	Known RBP	4.96	□□□□□ -1.62
RBM39-210	ENST00000425184	FPGS	Q05932	587 aa		4.96	□□□□□ -1.62
RBM39-210	ENST00000425184	SNAPC2	Q13487	334 aa		4.96	□□□□□ -1.62
RBM39-210	ENST00000425184	CCDC93	Q567U6	631 aa		4.96	□□□□□ -1.62
RBM39-210	ENST00000425184	PRR16	Q569H4	304 aa		4.96	□□□□□ -1.62
RBM39-210	ENST00000425184	CPA6	Q8N4T0	437 aa		4.96	□□□□□ -1.62
RBM39-210	ENST00000425184	PDPR	Q8NCN5	879 aa		4.96	□□□□□ -1.62
RBM39-210	ENST00000425184	SLC17A8	Q8NDX2	589 aa		4.96	□□□□□ -1.62
RBM39-210	ENST00000425184	TMIE	Q8NEW7	156 aa		4.96	□□□□□ -1.62
RBM39-210	ENST00000425184	SSH3	Q8TE77	659 aa		4.96	□□□□□ -1.62
RBM39-210	ENST00000425184	TMEM125	Q96AQ2	219 aa		4.96	□□□□□ -1.62
RBM39-210	ENST00000425184	HSPBAP1	Q96EW2	488 aa		4.96	□□□□□ -1.62
RBM39-210	ENST00000425184	BRD9	Q9H8M2	597 aa		4.96	□□□□□ -1.62
RBM39-210	ENST00000425184	KCTD5	Q9NXV2	234 aa		4.96	□□□□□ -1.62
RBM39-210	ENST00000425184	LRIT1	Q9P2V4	623 aa		4.96	□□□□□ -1.62
RBM39-210	ENST00000425184	SLC45A2	Q9UMX9	530 aa		4.96	□□□□□ -1.62
RBM39-210	ENST00000425184	INSL6	Q9Y581	213 aa		4.96	□□□□□ -1.62
RBM39-210	ENST00000425184	KDM6B	O15054	1643 aa		4.96	□□□□□ -1.62
RBM39-210	ENST00000425184	hCG_2014768	A0A024R1R8	64 aa		4.95	□□□□□ -1.62
RBM39-210	ENST00000425184	CCDC195	A0A1B0GUA6	201 aa		4.95	□□□□□ -1.62
RBM39-210	ENST00000425184	LRRC14B	A6NHZ5	514 aa		4.95	□□□□□ -1.62
RBM39-210	ENST00000425184	NT5C1B-RDH14	C9J2C7	533 aa		4.95	□□□□□ -1.62
RBM39-210	ENST00000425184	PEX1	O43933	1283 aa		4.95	□□□□□ -1.62
RBM39-210	ENST00000425184	FTH1P19	P0C7X4	201 aa		4.95	□□□□□ -1.62
RBM39-210	ENST00000425184	ANXA11	P50995	505 aa	Known RBP	4.95	□□□□□ -1.62
RBM39-210	ENST00000425184	FXR1	P51114	621 aa	Known RBP eCLIP	4.95	□□□□□ -1.62
RBM39-210	ENST00000425184	NEK2	P51955	445 aa		4.95	□□□□□ -1.62
RBM39-210	ENST00000425184	POU6F2	P78424	691 aa	Predicted RBP	4.95	□□□□□ -1.62
RBM39-210	ENST00000425184	ZNF169	Q14929	603 aa	Predicted RBP	4.95	□□□□□ -1.62
RBM39-210	ENST00000425184	PREPL	Q4J6C6	727 aa	Predicted RBP	4.95	□□□□□ -1.62
RBM39-210	ENST00000425184	USP45	Q70EL2	814 aa		4.95	□□□□□ -1.62
RBM39-210	ENST00000425184	PDSS2	Q86YH6	399 aa		4.95	□□□□□ -1.62
RBM39-210	ENST00000425184	FAM177A1	Q8N128	213 aa	Predicted RBP	4.95	□□□□□ -1.62
RBM39-210	ENST00000425184	CFAP52	Q8N1V2	620 aa		4.95	□□□□□ -1.62
RBM39-210	ENST00000425184	CAGE1	Q8TC20	777 aa		4.95	□□□□□ -1.62
RBM39-210	ENST00000425184	SCAMP4	Q969E2	229 aa		4.95	□□□□□ -1.62
RBM39-210	ENST00000425184	RGMA	Q96B86	450 aa		4.95	□□□□□ -1.62
RBM39-210	ENST00000425184	AASDHPPT	Q9NRN7	309 aa		4.95	□□□□□ -1.62
RBM39-210	ENST00000425184	INTS13	Q9NVM9	706 aa		4.95	□□□□□ -1.62
RBM39-210	ENST00000425184	RLIM	Q9NVW2	624 aa		4.95	□□□□□ -1.62
RBM39-210	ENST00000425184	CTTNBP2NL	Q9P2B4	639 aa		4.95	□□□□□ -1.62
RBM39-210	ENST00000425184	CFAP97	Q9P2B7	532 aa		4.95	□□□□□ -1.62
RBM39-210	ENST00000425184	RUSC2	Q8N2Y8	1516 aa		4.95	□□□□□ -1.62
RBM39-210	ENST00000425184	KIF27	Q86VH2	1401 aa		4.95	□□□□□ -1.62
RBM39-210	ENST00000425184	PLB1	Q6P1J6	1458 aa		4.94	□□□□□ -1.62
RBM39-210	ENST00000425184	ABCC2	Q92887	1545 aa		4.94	□□□□□ -1.62
RBM39-210	ENST00000425184	SUN1	O94901	812 aa		4.94	□□□□□ -1.62
RBM39-210	ENST00000425184	GJB1	P08034	283 aa		4.94	□□□□□ -1.62
RBM39-210	ENST00000425184	POU2F2	P09086	479 aa		4.94	□□□□□ -1.62
RBM39-210	ENST00000425184	VCAM1	P19320	739 aa		4.94	□□□□□ -1.62
RBM39-210	ENST00000425184	CLK3	P49761	638 aa	Known RBP	4.94	□□□□□ -1.62
RBM39-210	ENST00000425184	NOG	Q13253	232 aa		4.94	□□□□□ -1.62
RBM39-210	ENST00000425184	DYRK1A	Q13627	763 aa		4.94	□□□□□ -1.62
RBM39-210	ENST00000425184	SF3B3	Q15393	1217 aa	Known RBP	4.94	□□□□□ -1.62
RBM39-210	ENST00000425184	TAPT1	Q6NXT6	567 aa		4.94	□□□□□ -1.62
RBM39-210	ENST00000425184	HEATR3	Q7Z4Q2	680 aa		4.94	□□□□□ -1.62
RBM39-210	ENST00000425184	ZNF575	Q86XF7	245 aa		4.94	□□□□□ -1.62
RBM39-210	ENST00000425184	PRIMA1	Q86XR5	153 aa		4.94	□□□□□ -1.62
RBM39-210	ENST00000425184	ADGRG3	Q86Y34	549 aa		4.94	□□□□□ -1.62
RBM39-210	ENST00000425184	PRR18	Q8N4B5	295 aa		4.94	□□□□□ -1.62
RBM39-210	ENST00000425184	SIMC1	Q8NDZ2	872 aa		4.94	□□□□□ -1.62
RBM39-210	ENST00000425184	ACTRT2	Q8TDY3	377 aa		4.94	□□□□□ -1.62
RBM39-210	ENST00000425184	TRIB1	Q96RU8	372 aa		4.94	□□□□□ -1.62
RBM39-210	ENST00000425184	SMO	Q99835	787 aa		4.94	□□□□□ -1.62
RBM39-210	ENST00000425184	TCF7L1	Q9HCS4	588 aa		4.94	□□□□□ -1.62
RBM39-210	ENST00000425184	TYW1	Q9NV66	732 aa	Known RBP	4.94	□□□□□ -1.62
RBM39-210	ENST00000425184	VSX1	Q9NZR4	365 aa	Predicted RBP	4.94	□□□□□ -1.62
RBM39-210	ENST00000425184	PCDHA3	Q9Y5H8	950 aa		4.94	□□□□□ -1.62
RBM39-210	ENST00000425184	SALL3	Q9BXA9	1300 aa		4.94	□□□□□ -1.62
RBM39-210	ENST00000425184		E7ENX8	843 aa		4.93	□□□□□ -1.62
RBM39-210	ENST00000425184	TOR1B	O14657	336 aa		4.93	□□□□□ -1.62
RBM39-210	ENST00000425184	YY2	O15391	372 aa		4.93	□□□□□ -1.62
RBM39-210	ENST00000425184	CHEK2	O96017	543 aa		4.93	□□□□□ -1.62
RBM39-210	ENST00000425184	FTL	P02792	175 aa	Predicted RBP	4.93	□□□□□ -1.62
RBM39-210	ENST00000425184	SRGN	P10124	158 aa		4.93	□□□□□ -1.62
RBM39-210	ENST00000425184	PIK3CG	P48736	1102 aa		4.93	□□□□□ -1.62
RBM39-210	ENST00000425184	HK3	P52790	923 aa		4.93	□□□□□ -1.62
RBM39-210	ENST00000425184	PSMC1	P62191	440 aa	Known RBP	4.93	□□□□□ -1.62
RBM39-210	ENST00000425184	TAP2	Q03519	686 aa		4.93	□□□□□ -1.62
RBM39-210	ENST00000425184	CD300E	Q496F6	205 aa	Predicted RBP	4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms