RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 CYB561D2O14569 222 aa14.4□□□□□ -0.1
PRPF39-202ENST00000424478 XPOTO43592 962 aaKnown RBP14.4□□□□□ -0.1
PRPF39-202ENST00000424478 TLL1O43897 1013 aa14.4□□□□□ -0.1
PRPF39-202ENST00000424478 BAIAP3O94812 1187 aa14.4□□□□□ -0.1
PRPF39-202ENST00000424478 CFHP08603 1231 aa14.4□□□□□ -0.1
PRPF39-202ENST00000424478 LRPAP1P30533 357 aa14.4□□□□□ -0.1
PRPF39-202ENST00000424478 POU5F1Q01860 360 aaKnown RBP14.4□□□□□ -0.1
PRPF39-202ENST00000424478 MYO1EQ12965 1108 aa14.4□□□□□ -0.1
PRPF39-202ENST00000424478 PDXDC1Q6P996 788 aa14.4□□□□□ -0.1
PRPF39-202ENST00000424478 WDR59Q6PJI9 974 aa14.4□□□□□ -0.1
PRPF39-202ENST00000424478 DSTYKQ6XUX3 929 aa14.4□□□□□ -0.1
PRPF39-202ENST00000424478 SLC47A2Q86VL8 602 aa14.4□□□□□ -0.1
PRPF39-202ENST00000424478 NT5DC4Q86YG4 428 aa14.4□□□□□ -0.1
PRPF39-202ENST00000424478 CCDC150Q8NCX0 1101 aa14.4□□□□□ -0.1
PRPF39-202ENST00000424478 HERVK_113Q902F9 699 aa14.4□□□□□ -0.1
PRPF39-202ENST00000424478 ZNF689Q96CS4 500 aaPredicted RBP14.4□□□□□ -0.1
PRPF39-202ENST00000424478 SENP8Q96LD8 212 aa14.4□□□□□ -0.1
PRPF39-202ENST00000424478 RC3H2Q9HBD1 1191 aaKnown RBP14.4□□□□□ -0.1
PRPF39-202ENST00000424478 MARCH5Q9NX47 278 aa14.4□□□□□ -0.1
PRPF39-202ENST00000424478 GALTP07902 379 aa14.39□□□□□ -0.11
PRPF39-202ENST00000424478 LRRC43Q8N309 656 aa14.39□□□□□ -0.11
PRPF39-202ENST00000424478 SLC20A1Q8WUM9 679 aa14.39□□□□□ -0.11
PRPF39-202ENST00000424478 PPP1R9BQ96SB3 815 aa14.39□□□□□ -0.11
PRPF39-202ENST00000424478 PUF60Q9UHX1 559 aaKnown RBP14.39□□□□□ -0.11
PRPF39-202ENST00000424478 SPTBN5Q9NRC6 3674 aaKnown RBP14.39□□□□□ -0.11
PRPF39-202ENST00000424478 ATP2C2O75185 946 aa14.39□□□□□ -0.11
PRPF39-202ENST00000424478 ACO1P21399 889 aaKnown RBP14.39□□□□□ -0.11
PRPF39-202ENST00000424478 JAM2P57087 298 aa14.39□□□□□ -0.11
PRPF39-202ENST00000424478 PSMC1P62191 440 aaKnown RBP14.39□□□□□ -0.11
PRPF39-202ENST00000424478 OSTM1Q86WC4 334 aa14.39□□□□□ -0.11
PRPF39-202ENST00000424478 GLYCTKQ8IVS8 523 aa14.39□□□□□ -0.11
PRPF39-202ENST00000424478 C12orf29Q8N999 325 aa14.39□□□□□ -0.11
PRPF39-202ENST00000424478 SOWAHDA6NJG2 315 aa14.38□□□□□ -0.11
PRPF39-202ENST00000424478 C2CD2LO14523 706 aa14.38□□□□□ -0.11
PRPF39-202ENST00000424478 PMM2O15305 246 aa14.38□□□□□ -0.11
PRPF39-202ENST00000424478 CYP3A5P20815 502 aa14.38□□□□□ -0.11
PRPF39-202ENST00000424478 OR6B3Q8NGW1 331 aa14.38□□□□□ -0.11
PRPF39-202ENST00000424478 AUTS2Q8WXX7 1259 aa14.38□□□□□ -0.11
PRPF39-202ENST00000424478 FAN1Q9Y2M0 1017 aa14.38□□□□□ -0.11
PRPF39-202ENST00000424478 VWA8A3KMH1 1905 aa14.38□□□□□ -0.11
PRPF39-202ENST00000424478 KIAA1671Q9BY89 1806 aa14.38□□□□□ -0.11
PRPF39-202ENST00000424478 TADA2AO75478 443 aa14.38□□□□□ -0.11
PRPF39-202ENST00000424478 TKTP29401 623 aaKnown RBP14.38□□□□□ -0.11
PRPF39-202ENST00000424478 CLCN1P35523 988 aa14.38□□□□□ -0.11
PRPF39-202ENST00000424478 NDST1P52848 882 aa14.38□□□□□ -0.11
PRPF39-202ENST00000424478 ZBED6P86452 979 aa14.38□□□□□ -0.11
PRPF39-202ENST00000424478 ENPEPQ07075 957 aa14.38□□□□□ -0.11
PRPF39-202ENST00000424478 PDCL2Q8N4E4 241 aa14.38□□□□□ -0.11
PRPF39-202ENST00000424478 KBTBD7Q8WVZ9 684 aa14.38□□□□□ -0.11
PRPF39-202ENST00000424478 TMEM209Q96SK2 561 aa14.38□□□□□ -0.11
PRPF39-202ENST00000424478 INPPL1O15357 1258 aa14.38□□□□□ -0.11
PRPF39-202ENST00000424478 ALDH2P05091 517 aa14.38□□□□□ -0.11
PRPF39-202ENST00000424478 MFAP3P55082 362 aa14.38□□□□□ -0.11
PRPF39-202ENST00000424478 VN1R3Q9BXE9 311 aa14.38□□□□□ -0.11
PRPF39-202ENST00000424478 STK33Q9BYT3 514 aa14.38□□□□□ -0.11
PRPF39-202ENST00000424478 KANSL3Q9P2N6 904 aa14.38□□□□□ -0.11
PRPF39-202ENST00000424478 TFR2Q9UP52 801 aa14.38□□□□□ -0.11
PRPF39-202ENST00000424478 OR4Q2P0C623 313 aa14.37□□□□□ -0.11
PRPF39-202ENST00000424478 DNAJB2P25686 324 aa14.37□□□□□ -0.11
PRPF39-202ENST00000424478 ALDH7A1P49419 539 aaKnown RBP14.37□□□□□ -0.11
PRPF39-202ENST00000424478 TDRD12Q587J7 1177 aaKnown RBP14.37□□□□□ -0.11
PRPF39-202ENST00000424478 KCNT2Q6UVM3 1135 aa14.37□□□□□ -0.11
PRPF39-202ENST00000424478 ACOT1Q86TX2 421 aa14.37□□□□□ -0.11
PRPF39-202ENST00000424478 PALB2Q86YC2 1186 aa14.37□□□□□ -0.11
PRPF39-202ENST00000424478 LRRC52Q8N7C0 313 aa14.37□□□□□ -0.11
PRPF39-202ENST00000424478 WHAMMQ8TF30 809 aa14.37□□□□□ -0.11
PRPF39-202ENST00000424478 ZNF560Q96MR9 790 aa14.37□□□□□ -0.11
PRPF39-202ENST00000424478 NUP58Q9BVL2 599 aa14.37□□□□□ -0.11
PRPF39-202ENST00000424478 ELOVL4Q9GZR5 314 aa14.37□□□□□ -0.11
PRPF39-202ENST00000424478 FAM49BQ9NUQ9 324 aa14.37□□□□□ -0.11
PRPF39-202ENST00000424478 HOXA2O43364 376 aa14.37□□□□□ -0.11
PRPF39-202ENST00000424478 CA3P07451 260 aa14.37□□□□□ -0.11
PRPF39-202ENST00000424478 TPM1P09493 284 aa14.37□□□□□ -0.11
PRPF39-202ENST00000424478 SV2CQ496J9 727 aa14.37□□□□□ -0.11
PRPF39-202ENST00000424478 FAM171A1Q5VUB5 890 aa14.37□□□□□ -0.11
PRPF39-202ENST00000424478 SFMBT2Q5VUG0 894 aa14.37□□□□□ -0.11
PRPF39-202ENST00000424478 PASD1Q8IV76 773 aa14.37□□□□□ -0.11
PRPF39-202ENST00000424478 LRRC8AQ8IWT6 810 aa14.37□□□□□ -0.11
PRPF39-202ENST00000424478 C17orf53Q8N3J3 647 aaPredicted RBP14.37□□□□□ -0.11
PRPF39-202ENST00000424478 RBBP8NLQ8NC74 664 aaPredicted RBP14.37□□□□□ -0.11
PRPF39-202ENST00000424478 OR8K1Q8NGG5 319 aa14.37□□□□□ -0.11
PRPF39-202ENST00000424478 RSPH1Q8WYR4 309 aa14.37□□□□□ -0.11
PRPF39-202ENST00000424478 SHC3Q92529 594 aa14.37□□□□□ -0.11
PRPF39-202ENST00000424478 ZSWIM1Q9BR11 485 aa14.37□□□□□ -0.11
PRPF39-202ENST00000424478 C17orf80Q9BSJ5 609 aa14.37□□□□□ -0.11
PRPF39-202ENST00000424478 HAUS4Q9H6D7 363 aa14.37□□□□□ -0.11
PRPF39-202ENST00000424478 ARHGAP20Q9P2F6 1191 aa14.37□□□□□ -0.11
PRPF39-202ENST00000424478 RPL17P18621 184 aaKnown RBP14.36□□□□□ -0.11
PRPF39-202ENST00000424478 BRD2P25440 801 aaKnown RBP14.36□□□□□ -0.11
PRPF39-202ENST00000424478 SOX5P35711 763 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 GCNT1Q02742 428 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 KIAA0319Q5VV43 1072 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 CHRDL2Q6WN34 429 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 IRF2BP2Q7Z5L9 587 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 ADGRF2Q8IZF7 708 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 APPL2Q8NEU8 664 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 GDF15Q99988 308 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 DESI2Q9BSY9 194 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 BCO2Q9BYV7 579 aa14.36□□□□□ -0.11
PRPF39-202ENST00000424478 SPTLC3Q9NUV7 552 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms