RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 HCFC2Q9Y5Z7 792 aa27.3■■□□□ 1.96
TSPAN3-203ENST00000424443 CDY1Q9Y6F8 540 aa27.3■■□□□ 1.96
TSPAN3-203ENST00000424443 SPDYE4A6NLX3 237 aa27.29■■□□□ 1.96
TSPAN3-203ENST00000424443 TNNC1P63316 161 aa27.29■■□□□ 1.96
TSPAN3-203ENST00000424443 ADAM15Q13444 863 aa27.29■■□□□ 1.96
TSPAN3-203ENST00000424443 ZNF699Q32M78 642 aa27.29■■□□□ 1.96
TSPAN3-203ENST00000424443 PALB2Q86YC2 1186 aa27.29■■□□□ 1.96
TSPAN3-203ENST00000424443 FAM114A1Q8IWE2 563 aa27.29■■□□□ 1.96
TSPAN3-203ENST00000424443 THEM5Q8N1Q8 247 aa27.29■■□□□ 1.96
TSPAN3-203ENST00000424443 CASP10Q92851 521 aa27.29■■□□□ 1.96
TSPAN3-203ENST00000424443 MED15Q96RN5 788 aa27.29■■□□□ 1.96
TSPAN3-203ENST00000424443 MMS19Q96T76 1030 aa27.29■■□□□ 1.96
TSPAN3-203ENST00000424443 CLSTN3Q9BQT9 956 aa27.29■■□□□ 1.96
TSPAN3-203ENST00000424443 OXCT2Q9BYC2 517 aaPredicted RBP27.29■■□□□ 1.96
TSPAN3-203ENST00000424443 COG5Q9UP83 839 aa27.29■■□□□ 1.96
TSPAN3-203ENST00000424443 LINC01565O15544 149 aa27.28■■□□□ 1.96
TSPAN3-203ENST00000424443 GLUD1P00367 558 aa27.28■■□□□ 1.96
TSPAN3-203ENST00000424443 CYP11A1P05108 521 aa27.28■■□□□ 1.96
TSPAN3-203ENST00000424443 OR1D2P34982 312 aa27.28■■□□□ 1.96
TSPAN3-203ENST00000424443 CLCN4P51793 760 aa27.28■■□□□ 1.96
TSPAN3-203ENST00000424443 MCCD1P59942 119 aaPredicted RBP27.28■■□□□ 1.96
TSPAN3-203ENST00000424443 MRPL58Q14197 206 aaKnown RBP27.28■■□□□ 1.96
TSPAN3-203ENST00000424443 SGSM1Q2NKQ1 1148 aa27.28■■□□□ 1.96
TSPAN3-203ENST00000424443 WDR72Q3MJ13 1102 aa27.28■■□□□ 1.96
TSPAN3-203ENST00000424443 ELMSAN1Q6PJG2 1045 aa27.28■■□□□ 1.96
TSPAN3-203ENST00000424443 CNOT6LQ96LI5 555 aaKnown RBP27.28■■□□□ 1.96
TSPAN3-203ENST00000424443 NAT10Q9H0A0 1025 aaKnown RBP27.28■■□□□ 1.96
TSPAN3-203ENST00000424443 THAP9Q9H5L6 903 aa27.28■■□□□ 1.96
TSPAN3-203ENST00000424443 MAGEC2Q9UBF1 373 aaPredicted RBP27.28■■□□□ 1.96
TSPAN3-203ENST00000424443 DPP7Q9UHL4 492 aa27.28■■□□□ 1.96
TSPAN3-203ENST00000424443 OAZ2O95190 189 aa27.27■■□□□ 1.96
TSPAN3-203ENST00000424443 VNN1O95497 513 aa27.27■■□□□ 1.96
TSPAN3-203ENST00000424443 STAU1O95793 577 aaKnown RBP27.27■■□□□ 1.96
TSPAN3-203ENST00000424443 HLA-DRAP01903 254 aa27.27■■□□□ 1.96
TSPAN3-203ENST00000424443 ARPP19P56211 112 aa27.27■■□□□ 1.96
TSPAN3-203ENST00000424443 WSCD1Q658N2 575 aa27.27■■□□□ 1.96
TSPAN3-203ENST00000424443 C15orf39Q6ZRI6 1047 aa27.27■■□□□ 1.96
TSPAN3-203ENST00000424443 DPH6Q7L8W6 267 aa27.27■■□□□ 1.96
TSPAN3-203ENST00000424443 TMEM86AQ8N2M4 240 aa27.27■■□□□ 1.96
TSPAN3-203ENST00000424443 TOP6BLQ8N6T0 577 aa27.27■■□□□ 1.96
TSPAN3-203ENST00000424443 SLC35C1Q96A29 364 aa27.27■■□□□ 1.96
TSPAN3-203ENST00000424443 DNAJC25Q9H1X3 360 aa27.27■■□□□ 1.96
TSPAN3-203ENST00000424443 UBE2ZQ9H832 354 aaPredicted RBP27.27■■□□□ 1.96
TSPAN3-203ENST00000424443 NXF1Q9UBU9 619 aaKnown RBP27.27■■□□□ 1.96
TSPAN3-203ENST00000424443 FBXL5Q9UKA1 691 aa27.27■■□□□ 1.96
TSPAN3-203ENST00000424443 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.27■■□□□ 1.96
TSPAN3-203ENST00000424443 P4HA1P13674 534 aa27.26■■□□□ 1.96
TSPAN3-203ENST00000424443 MARSP56192 900 aaKnown RBP27.26■■□□□ 1.96
TSPAN3-203ENST00000424443 CTC1Q2NKJ3 1217 aa27.26■■□□□ 1.96
TSPAN3-203ENST00000424443 ZNF667Q5HYK9 610 aa27.26■■□□□ 1.96
TSPAN3-203ENST00000424443 C11orf57Q6ZUT1 292 aaPredicted RBP27.26■■□□□ 1.96
TSPAN3-203ENST00000424443 ENOX1Q8TC92 643 aaKnown RBP27.26■■□□□ 1.96
TSPAN3-203ENST00000424443 TAF4BQ92750 862 aa27.26■■□□□ 1.96
TSPAN3-203ENST00000424443 SYCE3A1L190 88 aa27.26■■□□□ 1.95
TSPAN3-203ENST00000424443 EPCAMP16422 314 aa27.26■■□□□ 1.95
TSPAN3-203ENST00000424443 SLC8B1Q6J4K2 584 aa27.26■■□□□ 1.95
TSPAN3-203ENST00000424443 PDCL2Q8N4E4 241 aa27.26■■□□□ 1.95
TSPAN3-203ENST00000424443 FBXL13Q8NEE6 735 aa27.26■■□□□ 1.95
TSPAN3-203ENST00000424443 TAS1R2Q8TE23 839 aa27.26■■□□□ 1.95
TSPAN3-203ENST00000424443 XYLT2Q9H1B5 865 aa27.26■■□□□ 1.95
TSPAN3-203ENST00000424443 L1RE1Q9UN81 338 aa27.26■■□□□ 1.95
TSPAN3-203ENST00000424443 OR6C75A6NL08 312 aa27.25■■□□□ 1.95
TSPAN3-203ENST00000424443 N4BP1O75113 896 aaKnown RBP27.25■■□□□ 1.95
TSPAN3-203ENST00000424443 CPB1P15086 417 aa27.25■■□□□ 1.95
TSPAN3-203ENST00000424443 MTIF2P46199 727 aaKnown RBP27.25■■□□□ 1.95
TSPAN3-203ENST00000424443 RBM10P98175 930 aaKnown RBP27.25■■□□□ 1.95
TSPAN3-203ENST00000424443 CETN1Q12798 172 aa27.25■■□□□ 1.95
TSPAN3-203ENST00000424443 RAB33AQ14088 237 aa27.25■■□□□ 1.95
TSPAN3-203ENST00000424443 COL19A1Q14993 1142 aa27.25■■□□□ 1.95
TSPAN3-203ENST00000424443 TRIM59Q8IWR1 403 aa27.25■■□□□ 1.95
TSPAN3-203ENST00000424443 ADGRF2Q8IZF7 708 aa27.25■■□□□ 1.95
TSPAN3-203ENST00000424443 SLC22A17Q8WUG5 538 aa27.25■■□□□ 1.95
TSPAN3-203ENST00000424443 VRTNQ9H8Y1 702 aa27.25■■□□□ 1.95
TSPAN3-203ENST00000424443 BARX2Q9UMQ3 279 aaPredicted RBP27.25■■□□□ 1.95
TSPAN3-203ENST00000424443 NFE2L3Q9Y4A8 694 aa27.25■■□□□ 1.95
TSPAN3-203ENST00000424443 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.24■■□□□ 1.95
TSPAN3-203ENST00000424443 ADAM12O43184 909 aa27.24■■□□□ 1.95
TSPAN3-203ENST00000424443 TGM5O43548 720 aa27.24■■□□□ 1.95
TSPAN3-203ENST00000424443 GLP2RO95838 553 aa27.24■■□□□ 1.95
TSPAN3-203ENST00000424443 C1RP00736 705 aa27.24■■□□□ 1.95
TSPAN3-203ENST00000424443 KCNA5P22460 613 aa27.24■■□□□ 1.95
TSPAN3-203ENST00000424443 MYL7Q01449 175 aa27.24■■□□□ 1.95
TSPAN3-203ENST00000424443 KCNC3Q14003 757 aa27.24■■□□□ 1.95
TSPAN3-203ENST00000424443 ANO6Q4KMQ2 910 aa27.24■■□□□ 1.95
TSPAN3-203ENST00000424443 RSPO2Q6UXX9 243 aaPredicted RBP27.24■■□□□ 1.95
TSPAN3-203ENST00000424443 TMEM184AQ6ZMB5 413 aa27.24■■□□□ 1.95
TSPAN3-203ENST00000424443 VN1R2Q8NFZ6 395 aa27.24■■□□□ 1.95
TSPAN3-203ENST00000424443 SPATA18Q8TC71 538 aa27.24■■□□□ 1.95
TSPAN3-203ENST00000424443 DZANK1Q9NVP4 752 aa27.24■■□□□ 1.95
TSPAN3-203ENST00000424443 RAB20Q9NX57 234 aa27.24■■□□□ 1.95
TSPAN3-203ENST00000424443 EYSQ5T1H1 3165 aa27.24■■□□□ 1.95
TSPAN3-203ENST00000424443 TBC1D4O60343 1298 aa27.23■■□□□ 1.95
TSPAN3-203ENST00000424443 LHX1P48742 406 aa27.23■■□□□ 1.95
TSPAN3-203ENST00000424443 FMO5P49326 533 aa27.23■■□□□ 1.95
TSPAN3-203ENST00000424443 ROR1Q01973 937 aa27.23■■□□□ 1.95
TSPAN3-203ENST00000424443 SOWAHAQ2M3V2 549 aa27.23■■□□□ 1.95
TSPAN3-203ENST00000424443 CBWD6Q4V339 395 aa27.23■■□□□ 1.95
TSPAN3-203ENST00000424443 CBWD3Q5JTY5 395 aa27.23■■□□□ 1.95
TSPAN3-203ENST00000424443 CBWD5Q5RIA9 395 aa27.23■■□□□ 1.95
TSPAN3-203ENST00000424443 DDX43Q9NXZ2 648 aaKnown RBP27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms