RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 YIPF1Q9Y548 306 aa16.44■□□□□ 0.22
USB1-202ENST00000423271 VPS13AQ96RL7 3174 aa16.44■□□□□ 0.22
USB1-202ENST00000423271 TCHHQ07283 1943 aa16.43■□□□□ 0.22
USB1-202ENST00000423271 OR6C75A6NL08 312 aa16.43■□□□□ 0.22
USB1-202ENST00000423271 PRPF6O94906 941 aaKnown RBP16.43■□□□□ 0.22
USB1-202ENST00000423271 BRSK2Q8IWQ3 736 aa16.43■□□□□ 0.22
USB1-202ENST00000423271 TTC9BQ8N6N2 239 aa16.43■□□□□ 0.22
USB1-202ENST00000423271 OR10T2Q8NGX3 314 aa16.43■□□□□ 0.22
USB1-202ENST00000423271 DHX58Q96C10 678 aa16.43■□□□□ 0.22
USB1-202ENST00000423271 CBWD1Q9BRT8 395 aa16.43■□□□□ 0.22
USB1-202ENST00000423271 TNMDQ9H2S6 317 aa16.43■□□□□ 0.22
USB1-202ENST00000423271 DPP3Q9NY33 737 aa16.43■□□□□ 0.22
USB1-202ENST00000423271 CFAP45Q9UL16 551 aa16.43■□□□□ 0.22
USB1-202ENST00000423271 PCDHB13Q9Y5F0 798 aa16.43■□□□□ 0.22
USB1-202ENST00000423271 GOLGA8IPA6NC78 632 aa16.42■□□□□ 0.22
USB1-202ENST00000423271 GOLGA8JA6NMD2 632 aa16.42■□□□□ 0.22
USB1-202ENST00000423271 TULP1O00294 542 aaPredicted RBP16.42■□□□□ 0.22
USB1-202ENST00000423271 STK25O00506 426 aa16.42■□□□□ 0.22
USB1-202ENST00000423271 CUTAO60888 179 aa16.42■□□□□ 0.22
USB1-202ENST00000423271 MOSPD3O75425 235 aa16.42■□□□□ 0.22
USB1-202ENST00000423271 RFX1P22670 979 aa16.42■□□□□ 0.22
USB1-202ENST00000423271 CDR1P51861 262 aa16.42■□□□□ 0.22
USB1-202ENST00000423271 POU5F1Q01860 360 aaKnown RBP16.42■□□□□ 0.22
USB1-202ENST00000423271 DUSP4Q13115 394 aa16.42■□□□□ 0.22
USB1-202ENST00000423271 GPR17Q13304 367 aa16.42■□□□□ 0.22
USB1-202ENST00000423271 PDZD4Q76G19 769 aaPredicted RBP16.42■□□□□ 0.22
USB1-202ENST00000423271 CCDC65Q8IXS2 484 aa16.42■□□□□ 0.22
USB1-202ENST00000423271 CCDC105Q8IYK2 499 aa16.42■□□□□ 0.22
USB1-202ENST00000423271 SYCP3Q8IZU3 236 aa16.42■□□□□ 0.22
USB1-202ENST00000423271 ELMOD1Q8N336 334 aa16.42■□□□□ 0.22
USB1-202ENST00000423271 RTP3Q9BQQ7 232 aa16.42■□□□□ 0.22
USB1-202ENST00000423271 OXCT2Q9BYC2 517 aaPredicted RBP16.42■□□□□ 0.22
USB1-202ENST00000423271 PLA2G2FQ9BZM2 168 aa16.42■□□□□ 0.22
USB1-202ENST00000423271 KBTBD4Q9NVX7 518 aa16.42■□□□□ 0.22
USB1-202ENST00000423271 GDE1Q9NZC3 331 aa16.42■□□□□ 0.22
USB1-202ENST00000423271 RCOR1Q9UKL0 485 aa16.42■□□□□ 0.22
USB1-202ENST00000423271 MAFFQ9ULX9 164 aa16.42■□□□□ 0.22
USB1-202ENST00000423271 ATP6V1DQ9Y5K8 247 aa16.42■□□□□ 0.22
USB1-202ENST00000423271 ZFHX2Q9C0A1 2572 aaPredicted RBP16.42■□□□□ 0.22
USB1-202ENST00000423271 MTMR11A4FU01 709 aa16.41■□□□□ 0.22
USB1-202ENST00000423271 IL18RAPO95256 599 aa16.41■□□□□ 0.22
USB1-202ENST00000423271 CYP11A1P05108 521 aa16.41■□□□□ 0.22
USB1-202ENST00000423271 MYL4P12829 197 aa16.41■□□□□ 0.22
USB1-202ENST00000423271 GJA1P17302 382 aa16.41■□□□□ 0.22
USB1-202ENST00000423271 GARTP22102 1010 aa16.41■□□□□ 0.22
USB1-202ENST00000423271 FCARP24071 287 aa16.41■□□□□ 0.22
USB1-202ENST00000423271 TAF6P49848 677 aa16.41■□□□□ 0.22
USB1-202ENST00000423271 KRT85P78386 507 aa16.41■□□□□ 0.22
USB1-202ENST00000423271 ALCAMQ13740 583 aa16.41■□□□□ 0.22
USB1-202ENST00000423271 MYBPC2Q14324 1141 aa16.41■□□□□ 0.22
USB1-202ENST00000423271 SCARA3Q6AZY7 606 aa16.41■□□□□ 0.22
USB1-202ENST00000423271 TANGO2Q6ICL3 276 aa16.41■□□□□ 0.22
USB1-202ENST00000423271 IQCEQ6IPM2 695 aa16.41■□□□□ 0.22
USB1-202ENST00000423271 DTWD2Q8NBA8 298 aa16.41■□□□□ 0.22
USB1-202ENST00000423271 ATAD1Q8NBU5 361 aa16.41■□□□□ 0.22
USB1-202ENST00000423271 KCNG4Q8TDN1 519 aa16.41■□□□□ 0.22
USB1-202ENST00000423271 ZNF512Q96ME7 567 aaPredicted RBP16.41■□□□□ 0.22
USB1-202ENST00000423271 PYM1Q9BRP8 204 aaKnown RBP16.41■□□□□ 0.22
USB1-202ENST00000423271 FOXQ1Q9C009 403 aa16.41■□□□□ 0.22
USB1-202ENST00000423271 TRIM9Q9C026 710 aa16.41■□□□□ 0.22
USB1-202ENST00000423271 DNAJC25Q9H1X3 360 aa16.41■□□□□ 0.22
USB1-202ENST00000423271 PCIF1Q9H4Z3 704 aa16.41■□□□□ 0.22
USB1-202ENST00000423271 RBAKQ9NYW8 714 aaPredicted RBP16.41■□□□□ 0.22
USB1-202ENST00000423271 SLC27A5Q9Y2P5 690 aa16.41■□□□□ 0.22
USB1-202ENST00000423271 CYB561D2O14569 222 aa16.4■□□□□ 0.22
USB1-202ENST00000423271 ZNF197O14709 1029 aa16.4■□□□□ 0.22
USB1-202ENST00000423271 ECI2O75521 394 aa16.4■□□□□ 0.22
USB1-202ENST00000423271 SOAT2O75908 522 aa16.4■□□□□ 0.22
USB1-202ENST00000423271 PAX3P23760 479 aa16.4■□□□□ 0.22
USB1-202ENST00000423271 EPHA5P54756 1037 aa16.4■□□□□ 0.22
USB1-202ENST00000423271 ASIC1P78348 528 aa16.4■□□□□ 0.22
USB1-202ENST00000423271 TFAMQ00059 246 aaKnown RBP16.4■□□□□ 0.22
USB1-202ENST00000423271 SNW1Q13573 536 aaKnown RBP16.4■□□□□ 0.22
USB1-202ENST00000423271 FAM78AQ5JUQ0 283 aa16.4■□□□□ 0.22
USB1-202ENST00000423271 CYP4A22Q5TCH4 519 aa16.4■□□□□ 0.22
USB1-202ENST00000423271 WSCD1Q658N2 575 aa16.4■□□□□ 0.22
USB1-202ENST00000423271 CENPPQ6IPU0 288 aa16.4■□□□□ 0.22
USB1-202ENST00000423271 PHLDB3Q6NSJ2 640 aa16.4■□□□□ 0.22
USB1-202ENST00000423271 TMC8Q8IU68 726 aa16.4■□□□□ 0.22
USB1-202ENST00000423271 NOC3LQ8WTT2 800 aaKnown RBP16.4■□□□□ 0.22
USB1-202ENST00000423271 LEO1Q8WVC0 666 aaPredicted RBP16.4■□□□□ 0.22
USB1-202ENST00000423271 BORCS6Q96GS4 357 aa16.4■□□□□ 0.22
USB1-202ENST00000423271 ZSWIM3Q96MP5 696 aa16.4■□□□□ 0.22
USB1-202ENST00000423271 IRF2BPLQ9H1B7 796 aa16.4■□□□□ 0.22
USB1-202ENST00000423271 CUEDC2Q9H467 287 aa16.4■□□□□ 0.22
USB1-202ENST00000423271 ASAH2Q9NR71 780 aa16.4■□□□□ 0.22
USB1-202ENST00000423271 CIZ1Q9ULV3 898 aaPredicted RBP16.4■□□□□ 0.22
USB1-202ENST00000423271 PCDHA7Q9UN72 937 aa16.4■□□□□ 0.22
USB1-202ENST00000423271 EXTL3O43909 919 aa16.39■□□□□ 0.21
USB1-202ENST00000423271 LRRN2O75325 713 aa16.39■□□□□ 0.21
USB1-202ENST00000423271 MICAL2O94851 1124 aa16.39■□□□□ 0.21
USB1-202ENST00000423271 DCNP07585 359 aaKnown RBP16.39■□□□□ 0.21
USB1-202ENST00000423271 CASP1P29466 404 aa16.39■□□□□ 0.21
USB1-202ENST00000423271 POLR2BP30876 1174 aaKnown RBP16.39■□□□□ 0.21
USB1-202ENST00000423271 HOXD13P35453 343 aa16.39■□□□□ 0.21
USB1-202ENST00000423271 ME1P48163 572 aa16.39■□□□□ 0.21
USB1-202ENST00000423271 TEAD2Q15562 447 aa16.39■□□□□ 0.21
USB1-202ENST00000423271 MLF2Q15773 248 aaPredicted RBP16.39■□□□□ 0.21
USB1-202ENST00000423271 SLC39A12Q504Y0 691 aa16.39■□□□□ 0.21
USB1-202ENST00000423271 ARMCX5Q6P1M9 558 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms