RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 CXorf56Q9H5V9 222 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 MRPL47Q9HD33 250 aaKnown RBP16.73■□□□□ 0.27
CDH1-202ENST00000422392 GEMIN8Q9NWZ8 242 aaKnown RBP16.73■□□□□ 0.27
CDH1-202ENST00000422392 EURLQ9NYK6 297 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 NKIRAS1Q9NYS0 192 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 FBXO40Q9UH90 709 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 LGALS13Q9UHV8 139 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 ZNRF3Q9ULT6 936 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 ARL2BPQ9Y2Y0 163 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 EXOC1LA0A1B0GW35 172 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 F8VP50 259 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 TCEA3O75764 348 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 KRT16P08779 473 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 RPSAP08865 295 aaKnown RBP16.73■□□□□ 0.27
CDH1-202ENST00000422392 TAC1P20366 129 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 ATP4AP20648 1035 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 ZNF252P-AS1Q0IIN9 211 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.73■□□□□ 0.27
CDH1-202ENST00000422392 RTKN2Q8IZC4 609 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 ANKLE1Q8NAG6 615 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 MTMR14Q8NCE2 650 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 RDM1Q8NG50 284 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 EXD1Q8NHP7 514 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 GIMAP7Q8NHV1 300 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 KLHL29Q96CT2 875 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 STAMBPL1Q96FJ0 436 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 IVNS1ABPQ9Y6Y0 642 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 TTLL13PA6NNM8 815 aa16.72■□□□□ 0.27
CDH1-202ENST00000422392 PECAM1P16284 738 aaPredicted RBP16.72■□□□□ 0.27
CDH1-202ENST00000422392 ARSEP51690 589 aa16.72■□□□□ 0.27
CDH1-202ENST00000422392 COPS2P61201 443 aa16.72■□□□□ 0.27
CDH1-202ENST00000422392 BNIP1Q12981 228 aa16.72■□□□□ 0.27
CDH1-202ENST00000422392 MTM1Q13496 603 aa16.72■□□□□ 0.27
CDH1-202ENST00000422392 ABHD15Q6UXT9 468 aa16.72■□□□□ 0.27
CDH1-202ENST00000422392 ARHGEF18Q6ZSZ5 1173 aa16.72■□□□□ 0.27
CDH1-202ENST00000422392 NIM1KQ8IY84 436 aa16.72■□□□□ 0.27
CDH1-202ENST00000422392 C4orf33Q8N1A6 199 aa16.72■□□□□ 0.27
CDH1-202ENST00000422392 FEZF2Q8TBJ5 459 aa16.72■□□□□ 0.27
CDH1-202ENST00000422392 ZNF606Q8WXB4 792 aa16.72■□□□□ 0.27
CDH1-202ENST00000422392 MAGEB18Q96M61 343 aa16.72■□□□□ 0.27
CDH1-202ENST00000422392 MCEEQ96PE7 176 aa16.72■□□□□ 0.27
CDH1-202ENST00000422392 SENP7Q9BQF6 1050 aa16.72■□□□□ 0.27
CDH1-202ENST00000422392 MSTO1Q9BUK6 570 aa16.72■□□□□ 0.27
CDH1-202ENST00000422392 C10orf88Q9H8K7 445 aa16.72■□□□□ 0.27
CDH1-202ENST00000422392 PRKAG3Q9UGI9 489 aa16.72■□□□□ 0.27
CDH1-202ENST00000422392 GOLGA8SH3BPF8 625 aa16.72■□□□□ 0.27
CDH1-202ENST00000422392 GOLGA8MH3BSY2 632 aa16.72■□□□□ 0.27
CDH1-202ENST00000422392 LIASO43766 372 aa16.72■□□□□ 0.27
CDH1-202ENST00000422392 EZRP15311 586 aaKnown RBP16.72■□□□□ 0.27
CDH1-202ENST00000422392 GLRA2P23416 452 aa16.72■□□□□ 0.27
CDH1-202ENST00000422392 FSTL1Q12841 308 aa16.72■□□□□ 0.27
CDH1-202ENST00000422392 GPS1Q13098 491 aa16.72■□□□□ 0.27
CDH1-202ENST00000422392 STAT4Q14765 748 aa16.72■□□□□ 0.27
CDH1-202ENST00000422392 PRAMEF18Q5VWM3 479 aa16.72■□□□□ 0.27
CDH1-202ENST00000422392 AGBL3Q8NEM8 1001 aa16.72■□□□□ 0.27
CDH1-202ENST00000422392 AGAP11Q8TF27 550 aa16.72■□□□□ 0.27
CDH1-202ENST00000422392 MAML1Q92585 1016 aa16.72■□□□□ 0.27
CDH1-202ENST00000422392 N4BP2L2Q92802 583 aaPredicted RBP16.72■□□□□ 0.27
CDH1-202ENST00000422392 RLFQ13129 1914 aa16.71■□□□□ 0.27
CDH1-202ENST00000422392 CST3P01034 146 aaPredicted RBP16.71■□□□□ 0.27
CDH1-202ENST00000422392 KRT1P04264 644 aa16.71■□□□□ 0.27
CDH1-202ENST00000422392 SLC8A1P32418 973 aa16.71■□□□□ 0.27
CDH1-202ENST00000422392 OGDHQ02218 1023 aa16.71■□□□□ 0.27
CDH1-202ENST00000422392 DNAJC3Q13217 504 aa16.71■□□□□ 0.27
CDH1-202ENST00000422392 ECHDC2Q86YB7 292 aa16.71■□□□□ 0.27
CDH1-202ENST00000422392 PHF13Q86YI8 300 aaPredicted RBP16.71■□□□□ 0.27
CDH1-202ENST00000422392 ZCCHC9Q8N567 271 aaKnown RBP16.71■□□□□ 0.27
CDH1-202ENST00000422392 TAB3Q8N5C8 712 aaPredicted RBP16.71■□□□□ 0.27
CDH1-202ENST00000422392 MAGEC3Q8TD91 643 aa16.71■□□□□ 0.27
CDH1-202ENST00000422392 SLITRK1Q96PX8 696 aa16.71■□□□□ 0.27
CDH1-202ENST00000422392 CCDC77Q9BR77 488 aa16.71■□□□□ 0.27
CDH1-202ENST00000422392 PITPNM3Q9BZ71 974 aa16.71■□□□□ 0.27
CDH1-202ENST00000422392 SLCO1B3Q9NPD5 702 aa16.71■□□□□ 0.27
CDH1-202ENST00000422392 SAE1Q9UBE0 346 aaPredicted RBP16.71■□□□□ 0.27
CDH1-202ENST00000422392 CFAP73A6NFT4 308 aa16.71■□□□□ 0.26
CDH1-202ENST00000422392 K7ERI5 159 aa16.71■□□□□ 0.26
CDH1-202ENST00000422392 TNFSF9P41273 254 aa16.71■□□□□ 0.26
CDH1-202ENST00000422392 PKN2Q16513 984 aaKnown RBP16.71■□□□□ 0.26
CDH1-202ENST00000422392 NSUN6Q8TEA1 469 aaKnown RBP16.71■□□□□ 0.26
CDH1-202ENST00000422392 TMEM121Q9BTD3 319 aa16.71■□□□□ 0.26
CDH1-202ENST00000422392 PARVAQ9NVD7 372 aa16.71■□□□□ 0.26
CDH1-202ENST00000422392 GRID1Q9ULK0 1009 aa16.71■□□□□ 0.26
CDH1-202ENST00000422392 KAT6AQ92794 2004 aa16.7■□□□□ 0.26
CDH1-202ENST00000422392 IFNB1P01574 187 aa16.7■□□□□ 0.26
CDH1-202ENST00000422392 DPEP1P16444 411 aa16.7■□□□□ 0.26
CDH1-202ENST00000422392 BRD2P25440 801 aaKnown RBP16.7■□□□□ 0.26
CDH1-202ENST00000422392 RTP1P59025 263 aa16.7■□□□□ 0.26
CDH1-202ENST00000422392 GAD2Q05329 585 aa16.7■□□□□ 0.26
CDH1-202ENST00000422392 NCOA4Q13772 614 aa16.7■□□□□ 0.26
CDH1-202ENST00000422392 MTFR1Q15390 333 aa16.7■□□□□ 0.26
CDH1-202ENST00000422392 FAM182AQ5T1J6 154 aa16.7■□□□□ 0.26
CDH1-202ENST00000422392 ZBED8Q8IZ13 594 aa16.7■□□□□ 0.26
CDH1-202ENST00000422392 KIRREL3Q8IZU9 778 aa16.7■□□□□ 0.26
CDH1-202ENST00000422392 RXFP1Q9HBX9 757 aa16.7■□□□□ 0.26
CDH1-202ENST00000422392 KIAA1586Q9HCI6 787 aa16.7■□□□□ 0.26
CDH1-202ENST00000422392 KLHL14Q9P2G3 628 aa16.7■□□□□ 0.26
CDH1-202ENST00000422392 SCINQ9Y6U3 715 aa16.7■□□□□ 0.26
CDH1-202ENST00000422392 FAM47DPA6NHR8 397 aa16.7■□□□□ 0.26
CDH1-202ENST00000422392 DNALI1O14645 258 aaPredicted RBP16.7■□□□□ 0.26
CDH1-202ENST00000422392 PEX10O60683 326 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms