RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 CHMP5Q9NZZ3 219 aa28.48■■■□□ 2.15
CDK9-202ENST00000421939 SIX4Q9UIU6 781 aa28.48■■■□□ 2.15
CDK9-202ENST00000421939 TRIOO75962 3097 aa28.47■■■□□ 2.15
CDK9-202ENST00000421939 KPNA7A9QM74 516 aa28.47■■■□□ 2.15
CDK9-202ENST00000421939 PRRG1O14668 218 aa28.47■■■□□ 2.15
CDK9-202ENST00000421939 PNOCQ13519 176 aa28.47■■■□□ 2.15
CDK9-202ENST00000421939 ZDHHC14Q8IZN3 488 aa28.47■■■□□ 2.15
CDK9-202ENST00000421939 OR5B17Q8NGF7 314 aa28.47■■■□□ 2.15
CDK9-202ENST00000421939 CXorf38Q8TB03 319 aa28.47■■■□□ 2.15
CDK9-202ENST00000421939 ACSF2Q96CM8 615 aaPredicted RBP28.47■■■□□ 2.15
CDK9-202ENST00000421939 BORCS6Q96GS4 357 aa28.47■■■□□ 2.15
CDK9-202ENST00000421939 C1QTNF1Q9BXJ1 281 aa28.47■■■□□ 2.15
CDK9-202ENST00000421939 AFF4Q9UHB7 1163 aaKnown RBP28.47■■■□□ 2.15
CDK9-202ENST00000421939 PDXKO00764 312 aa28.46■■■□□ 2.15
CDK9-202ENST00000421939 TNNC2P02585 160 aa28.46■■■□□ 2.15
CDK9-202ENST00000421939 KRT19P08727 400 aa28.46■■■□□ 2.15
CDK9-202ENST00000421939 DLATP10515 647 aaKnown RBP28.46■■■□□ 2.15
CDK9-202ENST00000421939 RBP5P82980 135 aa28.46■■■□□ 2.15
CDK9-202ENST00000421939 DUOXA2Q1HG44 320 aa28.46■■■□□ 2.15
CDK9-202ENST00000421939 SLC9A9Q8IVB4 645 aa28.46■■■□□ 2.15
CDK9-202ENST00000421939 TCEAL8Q8IYN2 117 aa28.46■■■□□ 2.15
CDK9-202ENST00000421939 CCDC127Q96BQ5 260 aa28.46■■■□□ 2.15
CDK9-202ENST00000421939 FNBP1Q96RU3 617 aa28.46■■■□□ 2.15
CDK9-202ENST00000421939 CGRRF1Q99675 332 aa28.46■■■□□ 2.15
CDK9-202ENST00000421939 CYP4F11Q9HBI6 524 aa28.46■■■□□ 2.15
CDK9-202ENST00000421939 MAFFQ9ULX9 164 aa28.46■■■□□ 2.15
CDK9-202ENST00000421939 POLIQ9UNA4 740 aa28.46■■■□□ 2.15
CDK9-202ENST00000421939 PRPF40AO75400 957 aaKnown RBP28.45■■■□□ 2.14
CDK9-202ENST00000421939 BFSP1Q12934 665 aa28.45■■■□□ 2.14
CDK9-202ENST00000421939 MYBPC2Q14324 1141 aa28.45■■■□□ 2.14
CDK9-202ENST00000421939 GRASPQ7Z6J2 395 aaPredicted RBP28.45■■■□□ 2.14
CDK9-202ENST00000421939 METTL23Q86XA0 190 aa28.45■■■□□ 2.14
CDK9-202ENST00000421939 PLCD3Q8N3E9 789 aa28.45■■■□□ 2.14
CDK9-202ENST00000421939 TMEM174Q8WUU8 243 aa28.45■■■□□ 2.14
CDK9-202ENST00000421939 TIGD1Q96MW7 591 aa28.45■■■□□ 2.14
CDK9-202ENST00000421939 DMAC2Q9NW81 257 aa28.45■■■□□ 2.14
CDK9-202ENST00000421939 SEC24AO95486 1093 aa28.44■■■□□ 2.14
CDK9-202ENST00000421939 NR3C1P04150 777 aa28.44■■■□□ 2.14
CDK9-202ENST00000421939 OR4Q2P0C623 313 aa28.44■■■□□ 2.14
CDK9-202ENST00000421939 ADCY1Q08828 1119 aa28.44■■■□□ 2.14
CDK9-202ENST00000421939 WSCD1Q658N2 575 aa28.44■■■□□ 2.14
CDK9-202ENST00000421939 RNF19BQ6ZMZ0 732 aa28.44■■■□□ 2.14
CDK9-202ENST00000421939 GUF1Q8N442 669 aaKnown RBP28.44■■■□□ 2.14
CDK9-202ENST00000421939 MFSD14AQ96MC6 490 aa28.44■■■□□ 2.14
CDK9-202ENST00000421939 RMND1Q9NWS8 449 aa28.44■■■□□ 2.14
CDK9-202ENST00000421939 R3HCC1Q9Y3T6 440 aaKnown RBP28.44■■■□□ 2.14
CDK9-202ENST00000421939 INSL5Q9Y5Q6 135 aa28.44■■■□□ 2.14
CDK9-202ENST00000421939 CALUO43852 315 aaPredicted RBP28.43■■■□□ 2.14
CDK9-202ENST00000421939 LRG1P02750 347 aa28.43■■■□□ 2.14
CDK9-202ENST00000421939 TNNI1P19237 187 aa28.43■■■□□ 2.14
CDK9-202ENST00000421939 PTPN21Q16825 1174 aa28.43■■■□□ 2.14
CDK9-202ENST00000421939 SCARA3Q6AZY7 606 aa28.43■■■□□ 2.14
CDK9-202ENST00000421939 GET4Q7L5D6 327 aaPredicted RBP28.43■■■□□ 2.14
CDK9-202ENST00000421939 OR10T2Q8NGX3 314 aa28.43■■■□□ 2.14
CDK9-202ENST00000421939 HOOK1Q9UJC3 728 aaKnown RBP28.43■■■□□ 2.14
CDK9-202ENST00000421939 MAPK8IP1Q9UQF2 711 aa28.43■■■□□ 2.14
CDK9-202ENST00000421939 N4BP1O75113 896 aaKnown RBP28.42■■■□□ 2.14
CDK9-202ENST00000421939 GPR17Q13304 367 aa28.42■■■□□ 2.14
CDK9-202ENST00000421939 TRAPPC11Q7Z392 1133 aa28.42■■■□□ 2.14
CDK9-202ENST00000421939 PGLYRP2Q96PD5 576 aa28.42■■■□□ 2.14
CDK9-202ENST00000421939 TMEM209Q96SK2 561 aa28.42■■■□□ 2.14
CDK9-202ENST00000421939 GZF1Q9H116 711 aaPredicted RBP28.42■■■□□ 2.14
CDK9-202ENST00000421939 GDAP2Q9NXN4 497 aa28.42■■■□□ 2.14
CDK9-202ENST00000421939 TRAF3IP3Q9Y228 551 aa28.42■■■□□ 2.14
CDK9-202ENST00000421939 GADD45BO75293 160 aaPredicted RBP28.41■■■□□ 2.14
CDK9-202ENST00000421939 SMC2O95347 1197 aa28.41■■■□□ 2.14
CDK9-202ENST00000421939 FSHRP23945 695 aa28.41■■■□□ 2.14
CDK9-202ENST00000421939 GBP2P32456 591 aaPredicted RBP28.41■■■□□ 2.14
CDK9-202ENST00000421939 NTHL1P78549 312 aa28.41■■■□□ 2.14
CDK9-202ENST00000421939 MYO1EQ12965 1108 aa28.41■■■□□ 2.14
CDK9-202ENST00000421939 THEM5Q8N1Q8 247 aa28.41■■■□□ 2.14
CDK9-202ENST00000421939 PDCL2Q8N4E4 241 aa28.41■■■□□ 2.14
CDK9-202ENST00000421939 GSDMAQ96QA5 445 aa28.41■■■□□ 2.14
CDK9-202ENST00000421939 MYADMQ96S97 322 aa28.41■■■□□ 2.14
CDK9-202ENST00000421939 RTP3Q9BQQ7 232 aa28.41■■■□□ 2.14
CDK9-202ENST00000421939 C11orf16Q9NQ32 467 aa28.41■■■□□ 2.14
CDK9-202ENST00000421939 HCFC1R1Q9NWW0 138 aa28.41■■■□□ 2.14
CDK9-202ENST00000421939 LIMD1Q9UGP4 676 aa28.41■■■□□ 2.14
CDK9-202ENST00000421939 L1RE1Q9UN81 338 aa28.41■■■□□ 2.14
CDK9-202ENST00000421939 DOCK6Q96HP0 2047 aa28.4■■■□□ 2.14
CDK9-202ENST00000421939 FAM86C2PA6NEL3 165 aa28.4■■■□□ 2.14
CDK9-202ENST00000421939 KINO60870 393 aaKnown RBP28.4■■■□□ 2.14
CDK9-202ENST00000421939 HUS1O60921 280 aa28.4■■■□□ 2.14
CDK9-202ENST00000421939 VNN2O95498 520 aa28.4■■■□□ 2.14
CDK9-202ENST00000421939 TMEM31Q5JXX7 168 aa28.4■■■□□ 2.14
CDK9-202ENST00000421939 PLEKHO2Q8TD55 490 aa28.4■■■□□ 2.14
CDK9-202ENST00000421939 HPDLQ96IR7 371 aa28.4■■■□□ 2.14
CDK9-202ENST00000421939 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.4■■■□□ 2.14
CDK9-202ENST00000421939 DNMT3BQ9UBC3 853 aaKnown RBP28.4■■■□□ 2.14
CDK9-202ENST00000421939 SNX9Q9Y5X1 595 aa28.4■■■□□ 2.14
CDK9-202ENST00000421939 DOCK8Q8NF50 2099 aa28.39■■■□□ 2.14
CDK9-202ENST00000421939 MTMR11A4FU01 709 aa28.39■■■□□ 2.14
CDK9-202ENST00000421939 ASGR2P07307 311 aa28.39■■■□□ 2.14
CDK9-202ENST00000421939 CASP4P49662 377 aa28.39■■■□□ 2.14
CDK9-202ENST00000421939 NFIL3Q16649 462 aa28.39■■■□□ 2.14
CDK9-202ENST00000421939 PABPC1LQ4VXU2 614 aaKnown RBP28.39■■■□□ 2.14
CDK9-202ENST00000421939 SMYD4Q8IYR2 804 aaPredicted RBP28.39■■■□□ 2.14
CDK9-202ENST00000421939 EDAQ92838 391 aa28.39■■■□□ 2.14
CDK9-202ENST00000421939 SMARCE1Q969G3 411 aa28.39■■■□□ 2.14
CDK9-202ENST00000421939 ZCWPW1Q9H0M4 648 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms