RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 SPIRE1Q08AE8 756 aa6.24□□□□□ -1.41
HDAC8-212ENST00000421523 FCHO2Q0JRZ9 810 aa6.24□□□□□ -1.41
HDAC8-212ENST00000421523 SCRN1Q12765 414 aa6.24□□□□□ -1.41
HDAC8-212ENST00000421523 GRSF1Q12849 480 aaKnown RBP eCLIP6.24□□□□□ -1.41
HDAC8-212ENST00000421523 PPP2R5CQ13362 524 aa6.24□□□□□ -1.41
HDAC8-212ENST00000421523 CAMK2BQ13554 666 aa6.24□□□□□ -1.41
HDAC8-212ENST00000421523 DMC1Q14565 340 aa6.24□□□□□ -1.41
HDAC8-212ENST00000421523 C2orf27AQ580R0 203 aa6.24□□□□□ -1.41
HDAC8-212ENST00000421523 XKR3Q5GH77 459 aa6.24□□□□□ -1.41
HDAC8-212ENST00000421523 EARS2Q5JPH6 523 aaKnown RBP6.24□□□□□ -1.41
HDAC8-212ENST00000421523 C6orf132Q5T0Z8 1188 aa6.24□□□□□ -1.41
HDAC8-212ENST00000421523 LRCH2Q5VUJ6 765 aa6.24□□□□□ -1.41
HDAC8-212ENST00000421523 PPP4R3AQ6IN85 833 aa6.24□□□□□ -1.41
HDAC8-212ENST00000421523 GALNT17Q6IS24 598 aa6.24□□□□□ -1.41
HDAC8-212ENST00000421523 SLC23A3Q6PIS1 610 aa6.24□□□□□ -1.41
HDAC8-212ENST00000421523 LPCAT2Q7L5N7 544 aa6.24□□□□□ -1.41
HDAC8-212ENST00000421523 HS6ST3Q8IZP7 471 aa6.24□□□□□ -1.41
HDAC8-212ENST00000421523 BLIDQ8IZY5 108 aa6.24□□□□□ -1.41
HDAC8-212ENST00000421523 LNX1Q8TBB1 728 aaPredicted RBP6.24□□□□□ -1.41
HDAC8-212ENST00000421523 RLN3Q8WXF3 142 aa6.24□□□□□ -1.41
HDAC8-212ENST00000421523 SH2D3AQ9BRG2 576 aa6.24□□□□□ -1.41
HDAC8-212ENST00000421523 LARP6Q9BRS8 491 aaKnown RBP6.24□□□□□ -1.41
HDAC8-212ENST00000421523 TEKT3Q9BXF9 490 aa6.24□□□□□ -1.41
HDAC8-212ENST00000421523 C22orf23Q9BZE7 217 aa6.24□□□□□ -1.41
HDAC8-212ENST00000421523 KCNMB3Q9NPA1 279 aa6.24□□□□□ -1.41
HDAC8-212ENST00000421523 AVENQ9NQS1 362 aaPredicted RBP6.24□□□□□ -1.41
HDAC8-212ENST00000421523 EBF1Q9UH73 591 aa6.24□□□□□ -1.41
HDAC8-212ENST00000421523 VAV3Q9UKW4 847 aa6.24□□□□□ -1.41
HDAC8-212ENST00000421523 NAP1L2Q9ULW6 460 aaPredicted RBP6.24□□□□□ -1.41
HDAC8-212ENST00000421523 SAMM50Q9Y512 469 aa6.24□□□□□ -1.41
HDAC8-212ENST00000421523 ARID2Q68CP9 1835 aa6.24□□□□□ -1.41
HDAC8-212ENST00000421523 TNRC6BQ9UPQ9 1833 aaKnown RBP6.24□□□□□ -1.41
HDAC8-212ENST00000421523 AHCTF1Q8WYP5 2266 aa6.24□□□□□ -1.41
HDAC8-212ENST00000421523 CELSR2Q9HCU4 2923 aa6.24□□□□□ -1.41
HDAC8-212ENST00000421523 ZNF197O14709 1029 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 ITGA4P13612 1032 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 FDPSP14324 419 aaKnown RBP6.23□□□□□ -1.41
HDAC8-212ENST00000421523 HOXA11P31270 313 aaPredicted RBP6.23□□□□□ -1.41
HDAC8-212ENST00000421523 PSMC5P62195 406 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 CDC42EP1Q00587 391 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 AKAP17AQ02040 695 aaKnown RBP6.23□□□□□ -1.41
HDAC8-212ENST00000421523 SSRP1Q08945 709 aaKnown RBP6.23□□□□□ -1.41
HDAC8-212ENST00000421523 CCDC173Q0VFZ6 552 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 PSMD2Q13200 908 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 RAB33AQ14088 237 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 HSP90AA2PQ14568 343 aaPredicted RBP6.23□□□□□ -1.41
HDAC8-212ENST00000421523 TEAD2Q15562 447 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 TMEM196Q5HYL7 178 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 CYP4A22Q5TCH4 519 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 LYSMD4Q5XG99 296 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 HIST2H2BCQ6DN03 193 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 ZNF574Q6ZN55 896 aaPredicted RBP6.23□□□□□ -1.41
HDAC8-212ENST00000421523 MIER3Q7Z3K6 550 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 HAUS6Q7Z4H7 955 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 MRPL10Q7Z7H8 261 aaKnown RBP6.23□□□□□ -1.41
HDAC8-212ENST00000421523 ZNF410Q86VK4 478 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 GPR65Q8IYL9 337 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 DEFB119Q8N690 84 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 FRMD1Q8N878 549 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 PDCD7Q8N8D1 485 aaKnown RBP6.23□□□□□ -1.41
HDAC8-212ENST00000421523 SETD7Q8WTS6 366 aaKnown RBP6.23□□□□□ -1.41
HDAC8-212ENST00000421523 TNFRSF25Q93038 417 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 NXPE2Q96DL1 559 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 NLRP4Q96MN2 994 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 PAAF1Q9BRP4 392 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 DHX33Q9H6R0 707 aaKnown RBP6.23□□□□□ -1.41
HDAC8-212ENST00000421523 PRDM16Q9HAZ2 1276 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 GJB4Q9NTQ9 266 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 AGPAT5Q9NUQ2 364 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 MIOSQ9NXC5 875 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 TCEAL9Q9UHQ7 104 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 TPCN1Q9ULQ1 816 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 SLC6A14Q9UN76 642 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 HES2Q9Y543 173 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 HEMK1Q9Y5R4 338 aaPredicted RBP6.23□□□□□ -1.41
HDAC8-212ENST00000421523 CDY1Q9Y6F8 540 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 PCDH15Q96QU1 1955 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 DNHD1Q96M86 4753 aa6.23□□□□□ -1.41
HDAC8-212ENST00000421523 OTOGQ6ZRI0 2925 aa6.22□□□□□ -1.41
HDAC8-212ENST00000421523 CASTOR2A6NHX0 329 aa6.22□□□□□ -1.41
HDAC8-212ENST00000421523 ARHGAP33O14559 1287 aa6.22□□□□□ -1.41
HDAC8-212ENST00000421523 TNFRSF10BO14763 440 aa6.22□□□□□ -1.41
HDAC8-212ENST00000421523 TBX3O15119 743 aa6.22□□□□□ -1.41
HDAC8-212ENST00000421523 CHMP2AO43633 222 aa6.22□□□□□ -1.41
HDAC8-212ENST00000421523 MOSPD3O75425 235 aa6.22□□□□□ -1.41
HDAC8-212ENST00000421523 KIF4AO95239 1232 aa6.22□□□□□ -1.41
HDAC8-212ENST00000421523 PRKCBP05771 671 aa6.22□□□□□ -1.41
HDAC8-212ENST00000421523 ATXN1LP0C7T5 689 aaKnown RBP6.22□□□□□ -1.41
HDAC8-212ENST00000421523 NPEPPSP55786 919 aa6.22□□□□□ -1.41
HDAC8-212ENST00000421523 TLE3Q04726 772 aa6.22□□□□□ -1.41
HDAC8-212ENST00000421523 DUOXA1Q1HG43 343 aa6.22□□□□□ -1.41
HDAC8-212ENST00000421523 INF2Q27J81 1249 aa6.22□□□□□ -1.41
HDAC8-212ENST00000421523 ITPRIPL2Q3MIP1 535 aa6.22□□□□□ -1.41
HDAC8-212ENST00000421523 MTERF2Q49AM1 385 aa6.22□□□□□ -1.41
HDAC8-212ENST00000421523 UBXN11Q5T124 520 aa6.22□□□□□ -1.41
HDAC8-212ENST00000421523 STXBP5Q5T5C0 1151 aa6.22□□□□□ -1.41
HDAC8-212ENST00000421523 NAIF1Q69YI7 327 aaPredicted RBP6.22□□□□□ -1.41
HDAC8-212ENST00000421523 SYT13Q7L8C5 426 aa6.22□□□□□ -1.41
HDAC8-212ENST00000421523 RHPN2Q8IUC4 686 aa6.22□□□□□ -1.41
HDAC8-212ENST00000421523 KSR1Q8IVT5 923 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms