RNA–Protein interactions for RNA: ENST00000421182.5

FN1-207, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,103 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-207ENST00000421182 NUDCD3Q8IVD9 361 aa11.65□□□□□ -0.54
FN1-207ENST00000421182 AIFM3Q96NN9 605 aa11.65□□□□□ -0.54
FN1-207ENST00000421182 OSBPL9Q96SU4 736 aa11.65□□□□□ -0.54
FN1-207ENST00000421182 MYCBPQ99417 103 aaPredicted RBP11.65□□□□□ -0.54
FN1-207ENST00000421182 AFF4Q9UHB7 1163 aaKnown RBP11.65□□□□□ -0.54
FN1-207ENST00000421182 SCOCQ9UIL1 159 aa11.65□□□□□ -0.54
FN1-207ENST00000421182 ZNF638Q14966 1978 aaKnown RBP11.65□□□□□ -0.54
FN1-207ENST00000421182 CSF1RP07333 972 aa11.65□□□□□ -0.54
FN1-207ENST00000421182 TP53BP2Q13625 1128 aa11.65□□□□□ -0.54
FN1-207ENST00000421182 C10orf120Q5SQS8 335 aa11.65□□□□□ -0.54
FN1-207ENST00000421182 RASIP1Q5U651 963 aa11.65□□□□□ -0.54
FN1-207ENST00000421182 SLC20A1Q8WUM9 679 aa11.65□□□□□ -0.54
FN1-207ENST00000421182 PTPRN2Q92932 1015 aa11.65□□□□□ -0.54
FN1-207ENST00000421182 UBQLN1Q9UMX0 589 aaKnown RBP11.65□□□□□ -0.54
FN1-207ENST00000421182 WDR91A4D1P6 747 aa11.65□□□□□ -0.54
FN1-207ENST00000421182 ANXA9O76027 345 aa11.65□□□□□ -0.54
FN1-207ENST00000421182 TDP2O95551 362 aa11.65□□□□□ -0.54
FN1-207ENST00000421182 SYF2O95926 243 aaKnown RBP11.65□□□□□ -0.54
FN1-207ENST00000421182 KRT14P02533 472 aa11.65□□□□□ -0.54
FN1-207ENST00000421182 CREMQ03060 361 aa11.65□□□□□ -0.54
FN1-207ENST00000421182 PTRHD1Q6GMV3 140 aaKnown RBP11.65□□□□□ -0.54
FN1-207ENST00000421182 TMEM143Q96AN5 459 aa11.65□□□□□ -0.54
FN1-207ENST00000421182 STARD7Q9NQZ5 370 aa11.65□□□□□ -0.54
FN1-207ENST00000421182 MROH7Q68CQ1 1323 aa11.65□□□□□ -0.54
FN1-207ENST00000421182 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.65□□□□□ -0.55
FN1-207ENST00000421182 H0Y626 953 aa11.65□□□□□ -0.55
FN1-207ENST00000421182 CXCL11O14625 94 aa11.65□□□□□ -0.55
FN1-207ENST00000421182 CFLARO15519 480 aa11.65□□□□□ -0.55
FN1-207ENST00000421182 ZNF177Q13360 481 aaPredicted RBP11.65□□□□□ -0.55
FN1-207ENST00000421182 PDIA6Q15084 440 aa11.65□□□□□ -0.55
FN1-207ENST00000421182 TMEM39BQ9GZU3 492 aa11.65□□□□□ -0.55
FN1-207ENST00000421182 TAF1DQ9H5J8 278 aaPredicted RBP11.65□□□□□ -0.55
FN1-207ENST00000421182 LATS2Q9NRM7 1088 aa11.65□□□□□ -0.55
FN1-207ENST00000421182 DIAPH2O60879 1101 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 SERPINB4P48594 390 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 ARSEP51690 589 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 STAT4Q14765 748 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 MOXD1Q6UVY6 613 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 CINPQ9BW66 212 aaPredicted RBP11.64□□□□□ -0.55
FN1-207ENST00000421182 UBXN6Q9BZV1 441 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 ARHGEF38Q9NXL2 777 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 DDIASQ8IXT1 998 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 TAGAPQ8N103 731 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 PPARGC1AQ9UBK2 798 aaKnown RBP11.64□□□□□ -0.55
FN1-207ENST00000421182 SNX5Q9Y5X3 404 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 APRTP07741 180 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 RPA1P27694 616 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 HDAC4P56524 1084 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 NCALDP61601 193 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 AP2B1P63010 937 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 SKP1P63208 163 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 HINFPQ9BQA5 517 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 MTG1Q9BT17 334 aaPredicted RBP11.64□□□□□ -0.55
FN1-207ENST00000421182 RRAGCQ9HB90 399 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 PAK5Q9P286 719 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 FAM47E-STBD1D6RA91 191 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 NFE2Q16621 373 aaPredicted RBP11.64□□□□□ -0.55
FN1-207ENST00000421182 SPDYAQ5MJ70 313 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 IRAK1BP1Q5VVH5 260 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 PPM1NQ8N819 430 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 RUBCNLQ9H714 662 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 MPP6Q9NZW5 540 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 F9P00740 461 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 IL10P22301 178 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 SLCO1A2P46721 670 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 C17orf53Q8N3J3 647 aaPredicted RBP11.64□□□□□ -0.55
FN1-207ENST00000421182 MRPL9Q9BYD2 267 aaKnown RBP11.64□□□□□ -0.55
FN1-207ENST00000421182 ZNF556Q9HAH1 456 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 CAPN11Q9UMQ6 739 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 ROBO1Q9Y6N7 1651 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 GFPT1Q06210 699 aaPredicted RBP11.64□□□□□ -0.55
FN1-207ENST00000421182 DCAF6Q58WW2 860 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 TMCO5AQ8N6Q1 288 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 NIF3L1Q9GZT8 377 aa11.64□□□□□ -0.55
FN1-207ENST00000421182 BMP10O95393 424 aa11.63□□□□□ -0.55
FN1-207ENST00000421182 POLBP06746 335 aa11.63□□□□□ -0.55
FN1-207ENST00000421182 TGM3Q08188 693 aa11.63□□□□□ -0.55
FN1-207ENST00000421182 SF3A3Q12874 501 aaKnown RBP eCLIP11.63□□□□□ -0.552e-10■■■■□ 26.7
FN1-207ENST00000421182 LRRC43Q8N309 656 aa11.63□□□□□ -0.55
FN1-207ENST00000421182 PRPF18Q99633 342 aaKnown RBP11.63□□□□□ -0.55
FN1-207ENST00000421182 THP07101 528 aa11.63□□□□□ -0.55
FN1-207ENST00000421182 PRR29P0C7W0 189 aa11.63□□□□□ -0.55
FN1-207ENST00000421182 GRK3P35626 688 aa11.63□□□□□ -0.55
FN1-207ENST00000421182 AASDHQ4L235 1098 aaPredicted RBP11.63□□□□□ -0.55
FN1-207ENST00000421182 RNF168Q8IYW5 571 aaPredicted RBP11.63□□□□□ -0.55
FN1-207ENST00000421182 NAGPAQ9UK23 515 aa11.63□□□□□ -0.55
FN1-207ENST00000421182 TPX2Q9ULW0 747 aaKnown RBP11.63□□□□□ -0.55
FN1-207ENST00000421182 CLASP2O75122 1294 aaKnown RBP11.63□□□□□ -0.55
FN1-207ENST00000421182 H2AFYO75367 372 aaKnown RBP11.63□□□□□ -0.55
FN1-207ENST00000421182 NCAM1P13591 858 aa11.63□□□□□ -0.55
FN1-207ENST00000421182 PDGFRAP16234 1089 aa11.63□□□□□ -0.55
FN1-207ENST00000421182 RNF135Q8IUD6 432 aa11.63□□□□□ -0.55
FN1-207ENST00000421182 GLYCTKQ8IVS8 523 aa11.63□□□□□ -0.55
FN1-207ENST00000421182 CCNYL1Q8N7R7 359 aa11.63□□□□□ -0.55
FN1-207ENST00000421182 TRIM9Q9C026 710 aa11.63□□□□□ -0.55
FN1-207ENST00000421182 EHD4Q9H223 541 aa11.63□□□□□ -0.55
FN1-207ENST00000421182 MRFAP1Q9Y605 127 aa11.63□□□□□ -0.55
FN1-207ENST00000421182 RASSF10A6NK89 507 aa11.63□□□□□ -0.55
FN1-207ENST00000421182 F5H5T6 163 aa11.63□□□□□ -0.55
FN1-207ENST00000421182 UBXN8O00124 270 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms