RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 LRRC3BQ96PB8 259 aa11.15□□□□□ -0.62
TNFAIP3-202ENST00000420009 TARS2Q9BW92 718 aaKnown RBP11.15□□□□□ -0.62
TNFAIP3-202ENST00000420009 MRPL4Q9BYD3 311 aaKnown RBP11.15□□□□□ -0.62
TNFAIP3-202ENST00000420009 CRISPLD1Q9H336 500 aa11.15□□□□□ -0.62
TNFAIP3-202ENST00000420009 TMEM134Q9H6X4 195 aa11.15□□□□□ -0.62
TNFAIP3-202ENST00000420009 RXFP3Q9NSD7 469 aa11.15□□□□□ -0.62
TNFAIP3-202ENST00000420009 GREB1Q4ZG55 1949 aa11.15□□□□□ -0.62
TNFAIP3-202ENST00000420009 SPEGQ15772 3267 aa11.15□□□□□ -0.63
TNFAIP3-202ENST00000420009 M0QZQ0 153 aa11.14□□□□□ -0.63
TNFAIP3-202ENST00000420009 JAK2O60674 1132 aa11.14□□□□□ -0.63
TNFAIP3-202ENST00000420009 OAZ2O95190 189 aa11.14□□□□□ -0.63
TNFAIP3-202ENST00000420009 EPN2O95208 641 aa11.14□□□□□ -0.63
TNFAIP3-202ENST00000420009 AARSP49588 968 aaKnown RBP eCLIP11.14□□□□□ -0.63
TNFAIP3-202ENST00000420009 PEX3P56589 373 aa11.14□□□□□ -0.63
TNFAIP3-202ENST00000420009 YWHAHQ04917 246 aaPredicted RBP11.14□□□□□ -0.63
TNFAIP3-202ENST00000420009 PLD1Q13393 1074 aa11.14□□□□□ -0.63
TNFAIP3-202ENST00000420009 ANKRD1Q15327 319 aa11.14□□□□□ -0.63
TNFAIP3-202ENST00000420009 ME3Q16798 604 aa11.14□□□□□ -0.63
TNFAIP3-202ENST00000420009 AASDHQ4L235 1098 aaPredicted RBP11.14□□□□□ -0.63
TNFAIP3-202ENST00000420009 ARHGAP29Q52LW3 1261 aa11.14□□□□□ -0.63
TNFAIP3-202ENST00000420009 ARID3BQ8IVW6 561 aaPredicted RBP11.14□□□□□ -0.63
TNFAIP3-202ENST00000420009 SYNPOQ8N3V7 929 aa11.14□□□□□ -0.63
TNFAIP3-202ENST00000420009 GAB3Q8WWW8 586 aa11.14□□□□□ -0.63
TNFAIP3-202ENST00000420009 PGLYRP2Q96PD5 576 aa11.14□□□□□ -0.63
TNFAIP3-202ENST00000420009 OXCT2Q9BYC2 517 aaPredicted RBP11.14□□□□□ -0.63
TNFAIP3-202ENST00000420009 OBP2AQ9NY56 170 aa11.14□□□□□ -0.63
TNFAIP3-202ENST00000420009 GTSE1Q9NYZ3 720 aa11.14□□□□□ -0.63
TNFAIP3-202ENST00000420009 TUBGCP4Q9UGJ1 667 aa11.14□□□□□ -0.63
TNFAIP3-202ENST00000420009 WDFY3Q8IZQ1 3526 aa11.14□□□□□ -0.63
TNFAIP3-202ENST00000420009 NUP210Q8TEM1 1887 aaPredicted RBP11.13□□□□□ -0.63
TNFAIP3-202ENST00000420009 KIF26AQ9ULI4 1882 aaPredicted RBP11.13□□□□□ -0.63
TNFAIP3-202ENST00000420009 CCDC163A0A0D9SF12 145 aa11.13□□□□□ -0.63
TNFAIP3-202ENST00000420009 CCDC169A6NNP5 214 aa11.13□□□□□ -0.63
TNFAIP3-202ENST00000420009 EXTL3O43909 919 aa11.13□□□□□ -0.63
TNFAIP3-202ENST00000420009 PRAMEF12O95522 483 aa11.13□□□□□ -0.63
TNFAIP3-202ENST00000420009 OR4Q2P0C623 313 aa11.13□□□□□ -0.63
TNFAIP3-202ENST00000420009 ZNF806P0C7X5 589 aa11.13□□□□□ -0.63
TNFAIP3-202ENST00000420009 LRPAP1P30533 357 aa11.13□□□□□ -0.63
TNFAIP3-202ENST00000420009 CCT6AP40227 531 aaKnown RBP11.13□□□□□ -0.63
TNFAIP3-202ENST00000420009 RAP1GAPP47736 663 aa11.13□□□□□ -0.63
TNFAIP3-202ENST00000420009 FOSBP53539 338 aa11.13□□□□□ -0.63
TNFAIP3-202ENST00000420009 DUSP4Q13115 394 aa11.13□□□□□ -0.63
TNFAIP3-202ENST00000420009 MAPK7Q13164 816 aa11.13□□□□□ -0.63
TNFAIP3-202ENST00000420009 DMP1Q13316 513 aaPredicted RBP11.13□□□□□ -0.63
TNFAIP3-202ENST00000420009 TRIM29Q14134 588 aa11.13□□□□□ -0.63
TNFAIP3-202ENST00000420009 PON2Q15165 354 aa11.13□□□□□ -0.63
TNFAIP3-202ENST00000420009 SLC10A6Q3KNW5 377 aa11.13□□□□□ -0.63
TNFAIP3-202ENST00000420009 PLA2G2CQ5R387 149 aa11.13□□□□□ -0.63
TNFAIP3-202ENST00000420009 PKN3Q6P5Z2 889 aa11.13□□□□□ -0.63
TNFAIP3-202ENST00000420009 GAREM2Q75VX8 874 aa11.13□□□□□ -0.63
TNFAIP3-202ENST00000420009 C12orf50Q8NA57 414 aaPredicted RBP11.13□□□□□ -0.63
TNFAIP3-202ENST00000420009 ZFYVE19Q96K21 471 aa11.13□□□□□ -0.63
TNFAIP3-202ENST00000420009 ARRDC1-AS1Q9H2J1 176 aa11.13□□□□□ -0.63
TNFAIP3-202ENST00000420009 LAMA1P25391 3075 aa11.13□□□□□ -0.63
TNFAIP3-202ENST00000420009 CEP295Q9C0D2 2601 aa11.13□□□□□ -0.63
TNFAIP3-202ENST00000420009 CITO14578 2027 aa11.13□□□□□ -0.63
TNFAIP3-202ENST00000420009 RALGAPA1Q6GYQ0 2036 aa11.13□□□□□ -0.63
TNFAIP3-202ENST00000420009 OR6C75A6NL08 312 aa11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 AXIN1O15169 862 aa11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 HIP1RO75146 1068 aa11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 TOM1L1O75674 476 aa11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 RPP40O75818 363 aaKnown RBP11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 AKAP3O75969 853 aa11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 HARSP12081 509 aaKnown RBP11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 WEE1P30291 646 aa11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 EPHB3P54753 998 aa11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 PLCB2Q00722 1185 aa11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 TNK2Q07912 1038 aa11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 ST3GAL1Q11201 340 aa11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 GPR17Q13304 367 aa11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 NOLC1Q14978 699 aaKnown RBP eCLIP11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 CCDC6Q16204 474 aa11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 STPG1Q5TH74 334 aa11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 CENPPQ6IPU0 288 aa11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 TMEM92Q6UXU6 159 aa11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 CACNA2D4Q7Z3S7 1137 aa11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 HAUS6Q7Z4H7 955 aa11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 KBTBD6Q86V97 674 aa11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 TMEM130Q8N3G9 435 aa11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 TTC9BQ8N6N2 239 aa11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 TTC8Q8TAM2 541 aa11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 FAM200AQ8TCP9 573 aa11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 PSMG2Q969U7 264 aa11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 TCHPQ9BT92 498 aa11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 C17orf75Q9HAS0 396 aa11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 KMT5AQ9NQR1 393 aa11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 DDX19AQ9NUU7 478 aaKnown RBP11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 RALYQ9UKM9 306 aaKnown RBP11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 KIAA1024Q9UPX6 916 aa11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 RBM19Q9Y4C8 960 aaKnown RBP11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 ASB3Q9Y575 518 aa11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 PCDHGA5Q9Y5G8 931 aa11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 TIMM13Q9Y5L4 95 aaPredicted RBP11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 CACNA1GO43497 2377 aa11.12□□□□□ -0.63
TNFAIP3-202ENST00000420009 FAM208BQ5VWN6 2430 aa11.11□□□□□ -0.63
TNFAIP3-202ENST00000420009 ZZEF1O43149 2961 aa11.11□□□□□ -0.63
TNFAIP3-202ENST00000420009 MTMR11A4FU01 709 aa11.11□□□□□ -0.63
TNFAIP3-202ENST00000420009 FGF19O95750 216 aa11.11□□□□□ -0.63
TNFAIP3-202ENST00000420009 PROS1P07225 676 aa11.11□□□□□ -0.63
TNFAIP3-202ENST00000420009 CXCL8P10145 99 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms