RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 ZCCHC9Q8N567 271 aaKnown RBP16.05■□□□□ 0.16
SEMA3B-203ENST00000419007 MAML1Q92585 1016 aa16.05■□□□□ 0.16
SEMA3B-203ENST00000419007 H0Y3Z8 333 aa16.05■□□□□ 0.16
SEMA3B-203ENST00000419007 PSTPIP1O43586 416 aa16.05■□□□□ 0.16
SEMA3B-203ENST00000419007 PSMC4P43686 418 aa16.05■□□□□ 0.16
SEMA3B-203ENST00000419007 PGM5Q15124 567 aa16.05■□□□□ 0.16
SEMA3B-203ENST00000419007 SEPT7Q16181 437 aaKnown RBP16.05■□□□□ 0.16
SEMA3B-203ENST00000419007 TIPINQ9BVW5 301 aa16.05■□□□□ 0.16
SEMA3B-203ENST00000419007 TRIM6Q9C030 488 aaPredicted RBP16.05■□□□□ 0.16
SEMA3B-203ENST00000419007 SGK1O00141 431 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 ALDH3A1P30838 453 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 PTGER2P43116 358 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 JAK3P52333 1124 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 POLGP54098 1239 aaPredicted RBP16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 WNT7BP56706 349 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 DYNLT1P63172 113 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 ANKRD20A2Q5SQ80 823 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 ANKRD20A1Q5TYW2 823 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 ANKRD20A3Q5VUR7 823 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 SWSAP1Q6NVH7 229 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 BZW1Q7L1Q6 419 aaKnown RBP16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 TEX2Q8IWB9 1127 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 TMEM174Q8WUU8 243 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 ANKFY1Q9P2R3 1169 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 CHKBQ9Y259 395 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 A0A1W2PPM1 405 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 CBX6O95503 412 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 ASMTLO95671 621 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 GTF2H1P32780 548 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 PDIA2Q13087 525 aaKnown RBP16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 SEZ6Q53EL9 994 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 ZNF394Q53GI3 561 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 MFSD7Q6UXD7 560 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 KIAA1683Q9H0B3 1180 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 C10orf88Q9H8K7 445 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 ANKEF1Q9NU02 776 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 TELO2Q9Y4R8 837 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 USH1CQ9Y6N9 552 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 KLRC2P26717 231 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 NLRP11P59045 1033 aaKnown RBP16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 KRT76Q01546 638 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 TAF11Q15544 211 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 TDRD10Q5VZ19 366 aaKnown RBP16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 NIPA1Q7RTP0 329 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 KATNAL2Q8IYT4 538 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 EXD1Q8NHP7 514 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 FBXL18Q96ME1 805 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 TMEM121Q9BTD3 319 aa16.04■□□□□ 0.16
SEMA3B-203ENST00000419007 GOLGA8RI6L899 631 aa16.03■□□□□ 0.16
SEMA3B-203ENST00000419007 SLC8A3P57103 927 aa16.03■□□□□ 0.16
SEMA3B-203ENST00000419007 DCUN1D2Q6PH85 259 aa16.03■□□□□ 0.16
SEMA3B-203ENST00000419007 UTP4Q969X6 686 aaKnown RBP16.03■□□□□ 0.16
SEMA3B-203ENST00000419007 SPDL1Q96EA4 605 aa16.03■□□□□ 0.16
SEMA3B-203ENST00000419007 DCTN4Q9UJW0 460 aa16.03■□□□□ 0.16
SEMA3B-203ENST00000419007 PCDHA10Q9Y5I2 948 aa16.03■□□□□ 0.16
SEMA3B-203ENST00000419007 LRRD1A4D1F6 860 aa16.03■□□□□ 0.16
SEMA3B-203ENST00000419007 LIASO43766 372 aa16.03■□□□□ 0.16
SEMA3B-203ENST00000419007 ZNF862O60290 1169 aa16.03■□□□□ 0.16
SEMA3B-203ENST00000419007 CYP1A1P04798 512 aaPredicted RBP16.03■□□□□ 0.16
SEMA3B-203ENST00000419007 CCNB1P14635 433 aa16.03■□□□□ 0.16
SEMA3B-203ENST00000419007 NOMO3P69849 1222 aa16.03■□□□□ 0.16
SEMA3B-203ENST00000419007 SLC1A5Q15758 541 aa16.03■□□□□ 0.16
SEMA3B-203ENST00000419007 MTERF2Q49AM1 385 aa16.03■□□□□ 0.16
SEMA3B-203ENST00000419007 RBBP8NLQ8NC74 664 aaPredicted RBP16.03■□□□□ 0.16
SEMA3B-203ENST00000419007 ZBTB45Q96K62 511 aaPredicted RBP16.03■□□□□ 0.16
SEMA3B-203ENST00000419007 LBHD1Q9BQE6 289 aaPredicted RBP16.03■□□□□ 0.16
SEMA3B-203ENST00000419007 PDCD2LQ9BRP1 358 aa16.03■□□□□ 0.16
SEMA3B-203ENST00000419007 ALG13Q9NP73 1137 aaKnown RBP16.03■□□□□ 0.16
SEMA3B-203ENST00000419007 NKX1-2Q9UD57 310 aaPredicted RBP16.03■□□□□ 0.16
SEMA3B-203ENST00000419007 GRID1Q9ULK0 1009 aa16.03■□□□□ 0.16
SEMA3B-203ENST00000419007 ACTL7BQ9Y614 415 aa16.03■□□□□ 0.16
SEMA3B-203ENST00000419007 IVNS1ABPQ9Y6Y0 642 aa16.03■□□□□ 0.16
SEMA3B-203ENST00000419007 DNALI1O14645 258 aaPredicted RBP16.02■□□□□ 0.16
SEMA3B-203ENST00000419007 ASNSP08243 561 aa16.02■□□□□ 0.16
SEMA3B-203ENST00000419007 SFNP31947 248 aa16.02■□□□□ 0.16
SEMA3B-203ENST00000419007 LMNB2Q03252 620 aa16.02■□□□□ 0.16
SEMA3B-203ENST00000419007 ZNF677Q86XU0 584 aa16.02■□□□□ 0.16
SEMA3B-203ENST00000419007 ABRAQ8N0Z2 381 aa16.02■□□□□ 0.16
SEMA3B-203ENST00000419007 KLF6Q99612 283 aaPredicted RBP16.02■□□□□ 0.16
SEMA3B-203ENST00000419007 NPHS2Q9NP85 383 aa16.02■□□□□ 0.16
SEMA3B-203ENST00000419007 SAE1Q9UBE0 346 aaPredicted RBP16.02■□□□□ 0.16
SEMA3B-203ENST00000419007 PTPRJQ12913 1337 aa16.02■□□□□ 0.16
SEMA3B-203ENST00000419007 F8VP50 259 aa16.02■□□□□ 0.16
SEMA3B-203ENST00000419007 TJP3O95049 919 aa16.02■□□□□ 0.16
SEMA3B-203ENST00000419007 KRT4P19013 534 aa16.02■□□□□ 0.16
SEMA3B-203ENST00000419007 GCAP28676 217 aa16.02■□□□□ 0.16
SEMA3B-203ENST00000419007 CUL2Q13617 745 aa16.02■□□□□ 0.16
SEMA3B-203ENST00000419007 LVRNQ6Q4G3 990 aa16.02■□□□□ 0.16
SEMA3B-203ENST00000419007 FEZF2Q8TBJ5 459 aa16.02■□□□□ 0.16
SEMA3B-203ENST00000419007 MCEEQ96PE7 176 aa16.02■□□□□ 0.16
SEMA3B-203ENST00000419007 SENP7Q9BQF6 1050 aa16.02■□□□□ 0.16
SEMA3B-203ENST00000419007 MOV10L1Q9BXT6 1211 aaKnown RBP16.02■□□□□ 0.16
SEMA3B-203ENST00000419007 POLR3FQ9H1D9 316 aaPredicted RBP16.02■□□□□ 0.16
SEMA3B-203ENST00000419007 C12orf65Q9H3J6 166 aaKnown RBP16.02■□□□□ 0.16
SEMA3B-203ENST00000419007 STARD13Q9Y3M8 1113 aa16.02■□□□□ 0.16
SEMA3B-203ENST00000419007 ATP2A1O14983 1001 aa16.02■□□□□ 0.15
SEMA3B-203ENST00000419007 EPHB2P29323 1055 aa16.02■□□□□ 0.15
SEMA3B-203ENST00000419007 OVGP1Q12889 678 aa16.02■□□□□ 0.15
SEMA3B-203ENST00000419007 LONP2Q86WA8 852 aa16.02■□□□□ 0.15
SEMA3B-203ENST00000419007 RIBC1Q8N443 379 aaPredicted RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms