RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 WDR62O43379 1518 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 AATKQ6ZMQ8 1374 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 CFAP69A5D8W1 941 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 PRSS29PA6NIE9 313 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 PHGDHO43175 533 aaKnown RBP3.29□□□□□ -1.88
VPS41-206ENST00000418457 CAND2O75155 1236 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 PPFIA4O75335 1185 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 ERN1O75460 977 aaKnown RBP3.29□□□□□ -1.88
VPS41-206ENST00000418457 NCR1O76036 304 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 CHEK2O96017 543 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 HRGP04196 525 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 CFIP05156 583 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 KITP10721 976 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 RHCEP18577 417 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 LAG3P18627 525 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 HDCP19113 662 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 PTGS2P35354 604 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 GNALP38405 381 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 ZNF135P52742 658 aaPredicted RBP3.29□□□□□ -1.88
VPS41-206ENST00000418457 TBX4P57082 545 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 FAM193AP78312 1265 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 HSD11B2P80365 405 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 FAM189BP81408 668 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 DGCR2P98153 550 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 RHDQ02161 417 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 OCA2Q04671 838 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 ZNF844Q08AG5 666 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 TUBA3CQ13748 450 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 KIAA0753Q2KHM9 967 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 SPDYE7PQ495Y7 208 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 MIIPQ5JXC2 388 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 EMC10Q5UCC4 262 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 RNF220Q5VTB9 566 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 SWSAP1Q6NVH7 229 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 TUBA3EQ6PEY2 450 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 DARS2Q6PI48 645 aaKnown RBP3.29□□□□□ -1.88
VPS41-206ENST00000418457 NOL8Q76FK4 1167 aaKnown RBP3.29□□□□□ -1.88
VPS41-206ENST00000418457 SYNE4Q8N205 404 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 CELF5Q8N6W0 485 aaKnown RBP3.29□□□□□ -1.88
VPS41-206ENST00000418457 PDPRQ8NCN5 879 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 CACTINQ8WUQ7 758 aaKnown RBP3.29□□□□□ -1.88
VPS41-206ENST00000418457 DDX17Q92841 729 aaKnown RBP3.29□□□□□ -1.88
VPS41-206ENST00000418457 ZNF503Q96F45 646 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 MED15Q96RN5 788 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 CNPPD1Q9BV87 410 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 SIK2Q9H0K1 926 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 ATP6V0A4Q9HBG4 840 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 AKIP1Q9NQ31 210 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 MYRFQ9Y2G1 1151 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 MTO1Q9Y2Z2 717 aaKnown RBP3.29□□□□□ -1.88
VPS41-206ENST00000418457 POLR1AO95602 1720 aaPredicted RBP3.29□□□□□ -1.88
VPS41-206ENST00000418457 LAMC3Q9Y6N6 1575 aa3.29□□□□□ -1.88
VPS41-206ENST00000418457 CFTRP13569 1480 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 UACAQ9BZF9 1416 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 CUL7Q14999 1698 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 CTTNBP2Q8WZ74 1663 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 CCDC78A2IDD5 438 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 E9PLN8 166 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 M0QYG6 137 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 POLRMTO00411 1230 aaKnown RBP3.28□□□□□ -1.88
VPS41-206ENST00000418457 GOLIM4O00461 696 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 MGEA5O60502 916 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 NDUFA10O95299 355 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 KRT18P05783 430 aaKnown RBP3.28□□□□□ -1.88
VPS41-206ENST00000418457 ELANEP08246 267 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 INSRRP14616 1297 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 NPR1P16066 1061 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 NR4A1P22736 598 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 POU6F2P78424 691 aaPredicted RBP3.28□□□□□ -1.88
VPS41-206ENST00000418457 PIGFQ07326 219 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 GALEQ14376 348 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 HABP2Q14520 560 aaPredicted RBP3.28□□□□□ -1.88
VPS41-206ENST00000418457 BEAN1Q3B7T3 259 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 LSM12Q3MHD2 195 aaKnown RBP3.28□□□□□ -1.88
VPS41-206ENST00000418457 TIGD2Q4W5G0 525 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 CRB2Q5IJ48 1285 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 CYB5RLQ6IPT4 315 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 ARMC6Q6NXE6 501 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.28□□□□□ -1.88
VPS41-206ENST00000418457 LRRC55Q6ZSA7 311 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 USP37Q86T82 979 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 COL23A1Q86Y22 540 aaPredicted RBP3.28□□□□□ -1.88
VPS41-206ENST00000418457 CFAP52Q8N1V2 620 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 FAM43AQ8N2R8 423 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 TMEM132CQ8N3T6 1108 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 PCSK9Q8NBP7 692 aaKnown RBP3.28□□□□□ -1.88
VPS41-206ENST00000418457 IL31RAQ8NI17 732 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 LRTOMTQ8WZ04 291 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 HAS1Q92839 578 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 MYEOVQ96EZ4 313 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 MRGPRX1Q96LB2 322 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 SMOQ99835 787 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 VKORC1Q9BQB6 163 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 ZNF341Q9BYN7 854 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 C22orf23Q9BZE7 217 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 TINAGL1Q9GZM7 467 aaPredicted RBP3.28□□□□□ -1.88
VPS41-206ENST00000418457 VPS11Q9H270 941 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 NRDE2Q9H7Z3 1164 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 HSFX1Q9UBD0 423 aa3.28□□□□□ -1.88
VPS41-206ENST00000418457 KCNE5Q9UJ90 142 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms