RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 MAP3K6O95382 1288 aa12.59□□□□□ -0.39
LIMK1-202ENST00000418310 POTEJP0CG39 1038 aa12.59□□□□□ -0.39
LIMK1-202ENST00000418310 KCNA2P16389 499 aa12.59□□□□□ -0.39
LIMK1-202ENST00000418310 TFAMQ00059 246 aaKnown RBP12.59□□□□□ -0.39
LIMK1-202ENST00000418310 NCOA4Q13772 614 aa12.59□□□□□ -0.39
LIMK1-202ENST00000418310 ITIH4Q14624 930 aa12.59□□□□□ -0.39
LIMK1-202ENST00000418310 AGAP11Q8TF27 550 aa12.59□□□□□ -0.39
LIMK1-202ENST00000418310 ROPN1BQ9BZX4 212 aaPredicted RBP12.59□□□□□ -0.39
LIMK1-202ENST00000418310 ROPN1Q9HAT0 212 aaPredicted RBP12.59□□□□□ -0.39
LIMK1-202ENST00000418310 PCSK1NQ9UHG2 260 aa12.59□□□□□ -0.39
LIMK1-202ENST00000418310 SLC12A4Q9UP95 1085 aa12.59□□□□□ -0.39
LIMK1-202ENST00000418310 A0A1W2PPM1 405 aa12.59□□□□□ -0.39
LIMK1-202ENST00000418310 CSDE1O75534 798 aaKnown RBP12.59□□□□□ -0.39
LIMK1-202ENST00000418310 KRT19P08727 400 aa12.59□□□□□ -0.39
LIMK1-202ENST00000418310 CA4P22748 312 aa12.59□□□□□ -0.39
LIMK1-202ENST00000418310 MGAT5Q09328 741 aa12.59□□□□□ -0.39
LIMK1-202ENST00000418310 MFSD5Q6N075 450 aa12.59□□□□□ -0.39
LIMK1-202ENST00000418310 CGB2Q6NT52 195 aa12.59□□□□□ -0.39
LIMK1-202ENST00000418310 NIPA1Q7RTP0 329 aa12.59□□□□□ -0.39
LIMK1-202ENST00000418310 THNSL1Q8IYQ7 743 aa12.59□□□□□ -0.39
LIMK1-202ENST00000418310 ABRAQ8N0Z2 381 aa12.59□□□□□ -0.39
LIMK1-202ENST00000418310 EMC1Q8N766 993 aa12.59□□□□□ -0.39
LIMK1-202ENST00000418310 CCDC77Q9BR77 488 aa12.59□□□□□ -0.39
LIMK1-202ENST00000418310 KLHL14Q9P2G3 628 aa12.59□□□□□ -0.39
LIMK1-202ENST00000418310 ZNRF3Q9ULT6 936 aa12.59□□□□□ -0.39
LIMK1-202ENST00000418310 SYNPO2Q9UMS6 1093 aa12.59□□□□□ -0.39
LIMK1-202ENST00000418310 AGTPBP1Q9UPW5 1226 aa12.59□□□□□ -0.39
LIMK1-202ENST00000418310 GJB1P08034 283 aa12.58□□□□□ -0.39
LIMK1-202ENST00000418310 TARSP26639 723 aaKnown RBP12.58□□□□□ -0.39
LIMK1-202ENST00000418310 ATP5DP30049 168 aa12.58□□□□□ -0.39
LIMK1-202ENST00000418310 RAP1GAPP47736 663 aa12.58□□□□□ -0.39
LIMK1-202ENST00000418310 OGDHQ02218 1023 aa12.58□□□□□ -0.39
LIMK1-202ENST00000418310 PDIA2Q13087 525 aaKnown RBP12.58□□□□□ -0.39
LIMK1-202ENST00000418310 NAA25Q14CX7 972 aa12.58□□□□□ -0.39
LIMK1-202ENST00000418310 DNAJC24Q6P3W2 148 aa12.58□□□□□ -0.39
LIMK1-202ENST00000418310 VSIG1Q86XK7 387 aa12.58□□□□□ -0.39
LIMK1-202ENST00000418310 MCPH1Q8NEM0 835 aa12.58□□□□□ -0.39
LIMK1-202ENST00000418310 CKAP2Q8WWK9 683 aa12.58□□□□□ -0.39
LIMK1-202ENST00000418310 ZNF606Q8WXB4 792 aa12.58□□□□□ -0.39
LIMK1-202ENST00000418310 FBXL18Q96ME1 805 aa12.58□□□□□ -0.39
LIMK1-202ENST00000418310 KIAA1683Q9H0B3 1180 aa12.58□□□□□ -0.39
LIMK1-202ENST00000418310 ETNK1Q9HBU6 452 aa12.58□□□□□ -0.39
LIMK1-202ENST00000418310 PLSCR1O15162 318 aa12.58□□□□□ -0.4
LIMK1-202ENST00000418310 PLA2G6O60733 806 aa12.58□□□□□ -0.4
LIMK1-202ENST00000418310 CDH16O75309 829 aa12.58□□□□□ -0.4
LIMK1-202ENST00000418310 C4BPAP04003 597 aaKnown RBP12.58□□□□□ -0.4
LIMK1-202ENST00000418310 GHRP10912 638 aa12.58□□□□□ -0.4
LIMK1-202ENST00000418310 NQO1P15559 274 aaKnown RBP12.58□□□□□ -0.4
LIMK1-202ENST00000418310 GLRA2P23416 452 aa12.58□□□□□ -0.4
LIMK1-202ENST00000418310 WDR4P57081 412 aaKnown RBP12.58□□□□□ -0.4
LIMK1-202ENST00000418310 CENPCQ03188 943 aa12.58□□□□□ -0.4
LIMK1-202ENST00000418310 NEDD9Q14511 834 aa12.58□□□□□ -0.4
LIMK1-202ENST00000418310 TMEM63BQ5T3F8 832 aa12.58□□□□□ -0.4
LIMK1-202ENST00000418310 CRELD2Q6UXH1 353 aaPredicted RBP12.58□□□□□ -0.4
LIMK1-202ENST00000418310 CROCCP2Q86T23 111 aa12.58□□□□□ -0.4
LIMK1-202ENST00000418310 TRIM50Q86XT4 487 aa12.58□□□□□ -0.4
LIMK1-202ENST00000418310 LRRC71Q8N4P6 559 aa12.58□□□□□ -0.4
LIMK1-202ENST00000418310 SAMD3Q8N6K7 520 aa12.58□□□□□ -0.4
LIMK1-202ENST00000418310 LPAR1Q92633 364 aa12.58□□□□□ -0.4
LIMK1-202ENST00000418310 IMPG2Q9BZV3 1241 aa12.58□□□□□ -0.4
LIMK1-202ENST00000418310 A1CFQ9NQ94 594 aaKnown RBP12.58□□□□□ -0.4
LIMK1-202ENST00000418310 DOCK5Q9H7D0 1870 aa12.58□□□□□ -0.4
LIMK1-202ENST00000418310 ZNFX1Q9P2E3 1918 aaKnown RBP12.58□□□□□ -0.4
LIMK1-202ENST00000418310 MAPK13O15264 365 aa12.58□□□□□ -0.4
LIMK1-202ENST00000418310 ACO1P21399 889 aaKnown RBP12.58□□□□□ -0.4
LIMK1-202ENST00000418310 SSTR1P30872 391 aa12.58□□□□□ -0.4
LIMK1-202ENST00000418310 CLNS1AP54105 237 aaKnown RBP12.58□□□□□ -0.4
LIMK1-202ENST00000418310 MYL6P60660 151 aa12.58□□□□□ -0.4
LIMK1-202ENST00000418310 OVGP1Q12889 678 aa12.58□□□□□ -0.4
LIMK1-202ENST00000418310 PREPLQ4J6C6 727 aaPredicted RBP12.58□□□□□ -0.4
LIMK1-202ENST00000418310 ARHGEF18Q6ZSZ5 1173 aa12.58□□□□□ -0.4
LIMK1-202ENST00000418310 FEZF2Q8TBJ5 459 aa12.58□□□□□ -0.4
LIMK1-202ENST00000418310 NSUN6Q8TEA1 469 aaKnown RBP12.58□□□□□ -0.4
LIMK1-202ENST00000418310 ERP27Q96DN0 273 aa12.58□□□□□ -0.4
LIMK1-202ENST00000418310 DEFB129Q9H1M3 183 aa12.58□□□□□ -0.4
LIMK1-202ENST00000418310 MGRN1O60291 552 aa12.57□□□□□ -0.4
LIMK1-202ENST00000418310 CYP1A1P04798 512 aaPredicted RBP12.57□□□□□ -0.4
LIMK1-202ENST00000418310 ERFP50548 548 aa12.57□□□□□ -0.4
LIMK1-202ENST00000418310 KLF1Q13351 362 aaPredicted RBP12.57□□□□□ -0.4
LIMK1-202ENST00000418310 TMEM132BQ14DG7 1078 aa12.57□□□□□ -0.4
LIMK1-202ENST00000418310 CIAPIN1Q6FI81 312 aa12.57□□□□□ -0.4
LIMK1-202ENST00000418310 GPAT2Q6NUI2 795 aa12.57□□□□□ -0.4
LIMK1-202ENST00000418310 FAM83AQ86UY5 434 aa12.57□□□□□ -0.4
LIMK1-202ENST00000418310 CEP120Q8N960 986 aa12.57□□□□□ -0.4
LIMK1-202ENST00000418310 SLC7A3Q8WY07 619 aa12.57□□□□□ -0.4
LIMK1-202ENST00000418310 TMEM109Q9BVC6 243 aa12.57□□□□□ -0.4
LIMK1-202ENST00000418310 TRABDQ9H4I3 376 aa12.57□□□□□ -0.4
LIMK1-202ENST00000418310 MRPL47Q9HD33 250 aaKnown RBP12.57□□□□□ -0.4
LIMK1-202ENST00000418310 ARHGAP28Q9P2N2 729 aa12.57□□□□□ -0.4
LIMK1-202ENST00000418310 DCTN4Q9UJW0 460 aa12.57□□□□□ -0.4
LIMK1-202ENST00000418310 ARL2BPQ9Y2Y0 163 aa12.57□□□□□ -0.4
LIMK1-202ENST00000418310 KAT6AQ92794 2004 aa12.57□□□□□ -0.4
LIMK1-202ENST00000418310 TBC1D12O60347 775 aa12.57□□□□□ -0.4
LIMK1-202ENST00000418310 SKAP2O75563 359 aaPredicted RBP12.57□□□□□ -0.4
LIMK1-202ENST00000418310 ATP4AP20648 1035 aa12.57□□□□□ -0.4
LIMK1-202ENST00000418310 GARTP22102 1010 aa12.57□□□□□ -0.4
LIMK1-202ENST00000418310 RPA3P35244 121 aaPredicted RBP12.57□□□□□ -0.4
LIMK1-202ENST00000418310 SLC1A1P43005 524 aa12.57□□□□□ -0.4
LIMK1-202ENST00000418310 COPS2P61201 443 aa12.57□□□□□ -0.4
LIMK1-202ENST00000418310 TCEAL1Q15170 157 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms