RNA–Protein interactions for RNA: ENST00000417572.5

SEC22C-205, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22C, Length 1,513 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-205ENST00000417572 KREMEN1Q96MU8 473 aa13.92□□□□□ -0.18
SEC22C-205ENST00000417572 TGS1Q96RS0 853 aaKnown RBP13.92□□□□□ -0.18
SEC22C-205ENST00000417572 VN1R3Q9BXE9 311 aa13.92□□□□□ -0.18
SEC22C-205ENST00000417572 BCO2Q9BYV7 579 aa13.92□□□□□ -0.18
SEC22C-205ENST00000417572 SMYD3Q9H7B4 428 aa13.92□□□□□ -0.18
SEC22C-205ENST00000417572 MTUS1Q9ULD2 1270 aa13.92□□□□□ -0.18
SEC22C-205ENST00000417572 PCDHB8Q9UN66 801 aa13.92□□□□□ -0.18
SEC22C-205ENST00000417572 L1RE1Q9UN81 338 aa13.92□□□□□ -0.18
SEC22C-205ENST00000417572 FHOD1Q9Y613 1164 aa13.92□□□□□ -0.18
SEC22C-205ENST00000417572 SF3B1O75533 1304 aaKnown RBP eCLIP13.92□□□□□ -0.18
SEC22C-205ENST00000417572 SCN1AP35498 2009 aa13.91□□□□□ -0.18
SEC22C-205ENST00000417572 A0A1W2PPC1 479 aa13.91□□□□□ -0.18
SEC22C-205ENST00000417572 C5orf67F2Z3F1 127 aa13.91□□□□□ -0.18
SEC22C-205ENST00000417572 ODC1P11926 461 aa13.91□□□□□ -0.18
SEC22C-205ENST00000417572 TRIM21P19474 475 aaKnown RBP13.91□□□□□ -0.18
SEC22C-205ENST00000417572 TBXAS1P24557 533 aaPredicted RBP13.91□□□□□ -0.18
SEC22C-205ENST00000417572 DNAJB2P25686 324 aa13.91□□□□□ -0.18
SEC22C-205ENST00000417572 TKTP29401 623 aaKnown RBP13.91□□□□□ -0.18
SEC22C-205ENST00000417572 MFAP3P55082 362 aa13.91□□□□□ -0.18
SEC22C-205ENST00000417572 ERVK-21P61565 698 aa13.91□□□□□ -0.18
SEC22C-205ENST00000417572 PLCB3Q01970 1234 aa13.91□□□□□ -0.18
SEC22C-205ENST00000417572 KRT17Q04695 432 aa13.91□□□□□ -0.18
SEC22C-205ENST00000417572 ELAVL2Q12926 359 aaKnown RBP13.91□□□□□ -0.18
SEC22C-205ENST00000417572 PRPF38BQ5VTL8 546 aaKnown RBP13.91□□□□□ -0.18
SEC22C-205ENST00000417572 SPECC1LQ69YQ0 1117 aa13.91□□□□□ -0.18
SEC22C-205ENST00000417572 DDX53Q86TM3 631 aaKnown RBP13.91□□□□□ -0.18
SEC22C-205ENST00000417572 CEP57Q86XR8 500 aa13.91□□□□□ -0.18
SEC22C-205ENST00000417572 PDCL2Q8N4E4 241 aa13.91□□□□□ -0.18
SEC22C-205ENST00000417572 TOP6BLQ8N6T0 577 aa13.91□□□□□ -0.18
SEC22C-205ENST00000417572 B3GALT6Q96L58 329 aa13.91□□□□□ -0.18
SEC22C-205ENST00000417572 MRPL45Q9BRJ2 306 aaKnown RBP13.91□□□□□ -0.18
SEC22C-205ENST00000417572 NUP58Q9BVL2 599 aa13.91□□□□□ -0.18
SEC22C-205ENST00000417572 PLVAPQ9BX97 442 aa13.91□□□□□ -0.18
SEC22C-205ENST00000417572 NAA15Q9BXJ9 866 aaKnown RBP13.91□□□□□ -0.18
SEC22C-205ENST00000417572 CERS4Q9HA82 394 aa13.91□□□□□ -0.18
SEC22C-205ENST00000417572 SLC28A3Q9HAS3 691 aa13.91□□□□□ -0.18
SEC22C-205ENST00000417572 CYP3A43Q9HB55 503 aa13.91□□□□□ -0.18
SEC22C-205ENST00000417572 NLRC4Q9NPP4 1024 aa13.91□□□□□ -0.18
SEC22C-205ENST00000417572 ITIH6Q6UXX5 1313 aa13.91□□□□□ -0.18
SEC22C-205ENST00000417572 TACC1O75410 805 aa13.9□□□□□ -0.18
SEC22C-205ENST00000417572 RB1P06400 928 aa13.9□□□□□ -0.18
SEC22C-205ENST00000417572 TYMPP19971 482 aa13.9□□□□□ -0.18
SEC22C-205ENST00000417572 FGFR3P22607 806 aa13.9□□□□□ -0.18
SEC22C-205ENST00000417572 ARHGAP44Q17R89 818 aa13.9□□□□□ -0.18
SEC22C-205ENST00000417572 LRIT3Q3SXY7 679 aa13.9□□□□□ -0.18
SEC22C-205ENST00000417572 PPP2R2DQ66LE6 453 aa13.9□□□□□ -0.18
SEC22C-205ENST00000417572 TMC6Q7Z403 805 aa13.9□□□□□ -0.18
SEC22C-205ENST00000417572 RNF168Q8IYW5 571 aaPredicted RBP13.9□□□□□ -0.18
SEC22C-205ENST00000417572 ADGRF2Q8IZF7 708 aa13.9□□□□□ -0.18
SEC22C-205ENST00000417572 CPLX3Q8WVH0 158 aa13.9□□□□□ -0.18
SEC22C-205ENST00000417572 KBTBD7Q8WVZ9 684 aa13.9□□□□□ -0.18
SEC22C-205ENST00000417572 TIFAQ96CG3 184 aa13.9□□□□□ -0.18
SEC22C-205ENST00000417572 FAM81BQ96LP2 452 aa13.9□□□□□ -0.18
SEC22C-205ENST00000417572 SAMD11Q96NU1 681 aa13.9□□□□□ -0.18
SEC22C-205ENST00000417572 ALG13Q9NP73 1137 aaKnown RBP13.9□□□□□ -0.18
SEC22C-205ENST00000417572 CISHQ9NSE2 258 aa13.9□□□□□ -0.18
SEC22C-205ENST00000417572 FBXL5Q9UKA1 691 aa13.9□□□□□ -0.18
SEC22C-205ENST00000417572 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.9□□□□□ -0.18
SEC22C-205ENST00000417572 ARHGEF37A1IGU5 675 aa13.9□□□□□ -0.19
SEC22C-205ENST00000417572 RNF225M0QZC1 329 aaPredicted RBP13.9□□□□□ -0.19
SEC22C-205ENST00000417572 SYN3O14994 580 aa13.9□□□□□ -0.19
SEC22C-205ENST00000417572 SOD2P04179 222 aa13.9□□□□□ -0.19
SEC22C-205ENST00000417572 CYP11A1P05108 521 aa13.9□□□□□ -0.19
SEC22C-205ENST00000417572 FAM163BP0C2L3 166 aa13.9□□□□□ -0.19
SEC22C-205ENST00000417572 CD58P19256 250 aa13.9□□□□□ -0.19
SEC22C-205ENST00000417572 ACO1P21399 889 aaKnown RBP13.9□□□□□ -0.19
SEC22C-205ENST00000417572 GNL1P36915 607 aaPredicted RBP13.9□□□□□ -0.19
SEC22C-205ENST00000417572 RAPGEF1Q13905 1077 aa13.9□□□□□ -0.19
SEC22C-205ENST00000417572 DRAP1Q14919 205 aaPredicted RBP13.9□□□□□ -0.19
SEC22C-205ENST00000417572 USP41Q3LFD5 358 aa13.9□□□□□ -0.19
SEC22C-205ENST00000417572 FIGNQ5HY92 759 aa13.9□□□□□ -0.19
SEC22C-205ENST00000417572 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.9□□□□□ -0.19
SEC22C-205ENST00000417572 ENOSF1Q7L5Y1 443 aa13.9□□□□□ -0.19
SEC22C-205ENST00000417572 CACNA2D4Q7Z3S7 1137 aa13.9□□□□□ -0.19
SEC22C-205ENST00000417572 OSTM1Q86WC4 334 aa13.9□□□□□ -0.19
SEC22C-205ENST00000417572 METTL23Q86XA0 190 aa13.9□□□□□ -0.19
SEC22C-205ENST00000417572 TMEM86AQ8N2M4 240 aa13.9□□□□□ -0.19
SEC22C-205ENST00000417572 UBR7Q8N806 425 aa13.9□□□□□ -0.19
SEC22C-205ENST00000417572 OR6B3Q8NGW1 331 aa13.9□□□□□ -0.19
SEC22C-205ENST00000417572 SPPL3Q8TCT6 385 aa13.9□□□□□ -0.19
SEC22C-205ENST00000417572 TTPALQ9BTX7 342 aa13.9□□□□□ -0.19
SEC22C-205ENST00000417572 STK33Q9BYT3 514 aa13.9□□□□□ -0.19
SEC22C-205ENST00000417572 TTYH3Q9C0H2 523 aa13.9□□□□□ -0.19
SEC22C-205ENST00000417572 CHST7Q9NS84 486 aa13.9□□□□□ -0.19
SEC22C-205ENST00000417572 CEP72Q9P209 647 aa13.9□□□□□ -0.19
SEC22C-205ENST00000417572 PUF60Q9UHX1 559 aaKnown RBP13.9□□□□□ -0.19
SEC22C-205ENST00000417572 DSEQ9UL01 958 aa13.9□□□□□ -0.19
SEC22C-205ENST00000417572 FOXN3O00409 490 aaPredicted RBP13.89□□□□□ -0.19
SEC22C-205ENST00000417572 GABRDO14764 452 aa13.89□□□□□ -0.19
SEC22C-205ENST00000417572 HCRTO43612 131 aa13.89□□□□□ -0.19
SEC22C-205ENST00000417572 GYPCP04921 128 aa13.89□□□□□ -0.19
SEC22C-205ENST00000417572 RFX1P22670 979 aa13.89□□□□□ -0.19
SEC22C-205ENST00000417572 WARSP23381 471 aaKnown RBP13.89□□□□□ -0.19
SEC22C-205ENST00000417572 LMO2P25791 158 aa13.89□□□□□ -0.19
SEC22C-205ENST00000417572 CDC25BP30305 580 aa13.89□□□□□ -0.19
SEC22C-205ENST00000417572 RTP2Q5QGT7 225 aa13.89□□□□□ -0.19
SEC22C-205ENST00000417572 OVOS1Q6IE37 1185 aa13.89□□□□□ -0.19
SEC22C-205ENST00000417572 DRC7Q8IY82 874 aa13.89□□□□□ -0.19
SEC22C-205ENST00000417572 VPS52Q8N1B4 723 aa13.89□□□□□ -0.19
SEC22C-205ENST00000417572 FBXO22Q8NEZ5 403 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms