RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 TTC13Q8NBP0 860 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 PARVAQ9NVD7 372 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 WDR35Q9P2L0 1181 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 EPS15L1Q9UBC2 864 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 CYP3A7-CYP3A51PA0A087WV96 503 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 CYP3A7P24462 503 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 MAP2K5Q13163 448 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 TMEM119Q4V9L6 283 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 RWDD4Q6NW29 188 aaKnown RBP13.49□□□□□ -0.25
SCAF8-203ENST00000417268 KIF2BQ8N4N8 673 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 MMGT1Q8N4V1 131 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 CDKL2Q92772 493 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 C18orf8Q96DM3 657 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 PNMA5Q96PV4 448 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 SLC8A2Q9UPR5 921 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 UBIAD1Q9Y5Z9 338 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.49□□□□□ -0.25
SCAF8-203ENST00000417268 RTN2O75298 545 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 ZBTB48P10074 688 aaPredicted RBP13.49□□□□□ -0.25
SCAF8-203ENST00000417268 UBA1P22314 1058 aaKnown RBP13.49□□□□□ -0.25
SCAF8-203ENST00000417268 BASP1P80723 227 aaKnown RBP13.49□□□□□ -0.25
SCAF8-203ENST00000417268 LAMTOR4Q0VGL1 99 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 FSCN1Q16658 493 aaKnown RBP13.49□□□□□ -0.25
SCAF8-203ENST00000417268 CENPPQ6IPU0 288 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 MYCBPAPQ8TBZ2 947 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 PYROXD1Q8WU10 500 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 HPDLQ96IR7 371 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 FAM161BQ96MY7 647 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 ERGIC2Q96RQ1 377 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 PCDHB7Q9Y5E2 793 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 CENPUQ71F23 418 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 GPR142Q7Z601 462 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 SPIRE2Q8WWL2 714 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 ARL8AQ96BM9 186 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 LRGUKQ96M69 825 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 TRAIPQ9BWF2 469 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 ANKZF1Q9H8Y5 726 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 KCNMB3Q9NPA1 279 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 USP15Q9Y4E8 981 aaPredicted RBP13.49□□□□□ -0.25
SCAF8-203ENST00000417268 A0A087WZ62 844 aa13.48□□□□□ -0.25
SCAF8-203ENST00000417268 FAM187AA6NFU0 413 aa13.48□□□□□ -0.25
SCAF8-203ENST00000417268 MSCO60682 206 aa13.48□□□□□ -0.25
SCAF8-203ENST00000417268 KRT10P13645 584 aa13.48□□□□□ -0.25
SCAF8-203ENST00000417268 RYBPQ8N488 228 aaPredicted RBP13.48□□□□□ -0.25
SCAF8-203ENST00000417268 SCYL1Q96KG9 808 aa13.48□□□□□ -0.25
SCAF8-203ENST00000417268 FDXACB1Q9BRP7 624 aaPredicted RBP13.48□□□□□ -0.25
SCAF8-203ENST00000417268 CCDC68Q9H2F9 335 aa13.48□□□□□ -0.25
SCAF8-203ENST00000417268 CFAP69A5D8W1 941 aa13.48□□□□□ -0.25
SCAF8-203ENST00000417268 EML1O00423 815 aa13.48□□□□□ -0.25
SCAF8-203ENST00000417268 NCF2P19878 526 aaPredicted RBP13.48□□□□□ -0.25
SCAF8-203ENST00000417268 SAT1P21673 171 aa13.48□□□□□ -0.25
SCAF8-203ENST00000417268 OR1G1P47890 313 aa13.48□□□□□ -0.25
SCAF8-203ENST00000417268 TAF6P49848 677 aa13.48□□□□□ -0.25
SCAF8-203ENST00000417268 CUL3Q13618 768 aa13.48□□□□□ -0.25
SCAF8-203ENST00000417268 SLC18A3Q16572 532 aa13.48□□□□□ -0.25
SCAF8-203ENST00000417268 ANKRD23Q86SG2 305 aa13.48□□□□□ -0.25
SCAF8-203ENST00000417268 KIRREL3Q8IZU9 778 aa13.48□□□□□ -0.25
SCAF8-203ENST00000417268 CHRNA3P32297 505 aa13.48□□□□□ -0.25
SCAF8-203ENST00000417268 HSPA9P38646 679 aaKnown RBP13.48□□□□□ -0.25
SCAF8-203ENST00000417268 MFSD10Q14728 455 aa13.48□□□□□ -0.25
SCAF8-203ENST00000417268 TREML2Q5T2D2 321 aa13.48□□□□□ -0.25
SCAF8-203ENST00000417268 BTBD8Q5XKL5 378 aa13.48□□□□□ -0.25
SCAF8-203ENST00000417268 DNAAF3Q8N9W5 541 aa13.48□□□□□ -0.25
SCAF8-203ENST00000417268 SCFD1Q8WVM8 642 aa13.48□□□□□ -0.25
SCAF8-203ENST00000417268 GRAMD1AQ96CP6 724 aa13.48□□□□□ -0.25
SCAF8-203ENST00000417268 PIDD1Q9HB75 910 aa13.48□□□□□ -0.25
SCAF8-203ENST00000417268 CFLARO15519 480 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 TTI1O43156 1089 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 HOXA2O43364 376 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 GPC4O75487 556 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 FGFR4P22455 802 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 PTGER2P43116 358 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 NR1H3Q13133 447 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 FAM110CQ1W6H9 321 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 FAM117BQ6P1L5 589 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 CBWD2Q8IUF1 395 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 CBWD1Q9BRT8 395 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 SMYD3Q9H7B4 428 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 NDE1Q9NXR1 346 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 PSMD10O75832 226 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 FUT2Q10981 343 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 CELF3Q5SZQ8 465 aaKnown RBP13.47□□□□□ -0.25
SCAF8-203ENST00000417268 TTI2Q6NXR4 508 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 TMEM154Q6P9G4 183 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 LBX2Q6XYB7 198 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 RFX8Q6ZV50 586 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 DCP1BQ8IZD4 617 aaKnown RBP13.47□□□□□ -0.25
SCAF8-203ENST00000417268 SEPT8Q92599 483 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 KIF9Q9HAQ2 790 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 G3BP2Q9UN86 482 aaKnown RBP13.47□□□□□ -0.25
SCAF8-203ENST00000417268 ASTN2O75129 1339 aaPredicted RBP13.47□□□□□ -0.25
SCAF8-203ENST00000417268 AGTP01019 485 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 APOEP02649 317 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 HNRNPCP07910 306 aaKnown RBP eCLIP13.47□□□□□ -0.251e-6■□□□□ 10.5
SCAF8-203ENST00000417268 RALAP11233 206 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 GTF2H1P32780 548 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 TMPRSS15P98073 1019 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 KDM7AQ6ZMT4 941 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 RHOT1Q8IXI2 618 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 REM2Q8IYK8 340 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms