RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 MLF2Q15773 248 aaPredicted RBP19.03■□□□□ 0.64
PDLIM2-208ENST00000416159 TANGO2Q6ICL3 276 aa19.03■□□□□ 0.64
PDLIM2-208ENST00000416159 POTEHQ6S545 545 aa19.03■□□□□ 0.64
PDLIM2-208ENST00000416159 HS6ST3Q8IZP7 471 aa19.03■□□□□ 0.64
PDLIM2-208ENST00000416159 SYCP3Q8IZU3 236 aa19.03■□□□□ 0.64
PDLIM2-208ENST00000416159 PGLYRP2Q96PD5 576 aa19.03■□□□□ 0.64
PDLIM2-208ENST00000416159 LRRC27Q9C0I9 530 aa19.03■□□□□ 0.64
PDLIM2-208ENST00000416159 IKZF4Q9H2S9 585 aa19.03■□□□□ 0.64
PDLIM2-208ENST00000416159 ZFP14Q9HCL3 533 aa19.03■□□□□ 0.64
PDLIM2-208ENST00000416159 SCN1AP35498 2009 aa19.03■□□□□ 0.64
PDLIM2-208ENST00000416159 KANSL1LA0AUZ9 987 aa19.02■□□□□ 0.64
PDLIM2-208ENST00000416159 VNN2O95498 520 aa19.02■□□□□ 0.64
PDLIM2-208ENST00000416159 DCNP07585 359 aaKnown RBP19.02■□□□□ 0.64
PDLIM2-208ENST00000416159 GARTP22102 1010 aa19.02■□□□□ 0.64
PDLIM2-208ENST00000416159 CCR2P41597 374 aa19.02■□□□□ 0.64
PDLIM2-208ENST00000416159 ALDH1A3P47895 512 aa19.02■□□□□ 0.64
PDLIM2-208ENST00000416159 EPHB3P54753 998 aa19.02■□□□□ 0.64
PDLIM2-208ENST00000416159 DUSP4Q13115 394 aa19.02■□□□□ 0.64
PDLIM2-208ENST00000416159 CENPPQ6IPU0 288 aa19.02■□□□□ 0.64
PDLIM2-208ENST00000416159 METTL23Q86XA0 190 aa19.02■□□□□ 0.64
PDLIM2-208ENST00000416159 CCDC65Q8IXS2 484 aa19.02■□□□□ 0.64
PDLIM2-208ENST00000416159 PDILTQ8N807 584 aa19.02■□□□□ 0.64
PDLIM2-208ENST00000416159 DDX23Q9BUQ8 820 aaKnown RBP19.02■□□□□ 0.64
PDLIM2-208ENST00000416159 PLA2G2FQ9BZM2 168 aa19.02■□□□□ 0.64
PDLIM2-208ENST00000416159 GPR88Q9GZN0 384 aa19.02■□□□□ 0.64
PDLIM2-208ENST00000416159 TMEM206Q9H813 350 aa19.02■□□□□ 0.64
PDLIM2-208ENST00000416159 HSFX1Q9UBD0 423 aa19.02■□□□□ 0.64
PDLIM2-208ENST00000416159 MTMR11A4FU01 709 aa19.01■□□□□ 0.63
PDLIM2-208ENST00000416159 CYB561D2O14569 222 aa19.01■□□□□ 0.63
PDLIM2-208ENST00000416159 MOSPD3O75425 235 aa19.01■□□□□ 0.63
PDLIM2-208ENST00000416159 FAM78AQ5JUQ0 283 aa19.01■□□□□ 0.63
PDLIM2-208ENST00000416159 EFCAB13Q8IY85 973 aa19.01■□□□□ 0.63
PDLIM2-208ENST00000416159 THEM5Q8N1Q8 247 aa19.01■□□□□ 0.63
PDLIM2-208ENST00000416159 PJA1Q8NG27 643 aa19.01■□□□□ 0.63
PDLIM2-208ENST00000416159 ASB16Q96NS5 453 aa19.01■□□□□ 0.63
PDLIM2-208ENST00000416159 FAM213AQ9BRX8 229 aa19.01■□□□□ 0.63
PDLIM2-208ENST00000416159 OSBPL6Q9BZF3 934 aa19.01■□□□□ 0.63
PDLIM2-208ENST00000416159 FOXQ1Q9C009 403 aa19.01■□□□□ 0.63
PDLIM2-208ENST00000416159 DLGAP2Q9P1A6 1054 aa19.01■□□□□ 0.63
PDLIM2-208ENST00000416159 TFIP11Q9UBB9 837 aaKnown RBP19.01■□□□□ 0.63
PDLIM2-208ENST00000416159 ASB3Q9Y575 518 aa19.01■□□□□ 0.63
PDLIM2-208ENST00000416159 YEATS4O95619 227 aa19■□□□□ 0.63
PDLIM2-208ENST00000416159 FCARP24071 287 aa19■□□□□ 0.63
PDLIM2-208ENST00000416159 CASP5P51878 434 aa19■□□□□ 0.63
PDLIM2-208ENST00000416159 STXBP4Q6ZWJ1 553 aa19■□□□□ 0.63
PDLIM2-208ENST00000416159 FRMD5Q7Z6J6 570 aa19■□□□□ 0.63
PDLIM2-208ENST00000416159 HSCBQ8IWL3 235 aa19■□□□□ 0.63
PDLIM2-208ENST00000416159 BRSK2Q8IWQ3 736 aa19■□□□□ 0.63
PDLIM2-208ENST00000416159 ATAD1Q8NBU5 361 aa19■□□□□ 0.63
PDLIM2-208ENST00000416159 CACTINQ8WUQ7 758 aaKnown RBP19■□□□□ 0.63
PDLIM2-208ENST00000416159 DNASE1L2Q92874 299 aa19■□□□□ 0.63
PDLIM2-208ENST00000416159 SMARCD2Q92925 531 aa19■□□□□ 0.63
PDLIM2-208ENST00000416159 ZNF560Q96MR9 790 aa19■□□□□ 0.63
PDLIM2-208ENST00000416159 TMEM209Q96SK2 561 aa19■□□□□ 0.63
PDLIM2-208ENST00000416159 PYM1Q9BRP8 204 aaKnown RBP19■□□□□ 0.63
PDLIM2-208ENST00000416159 TNMDQ9H2S6 317 aa19■□□□□ 0.63
PDLIM2-208ENST00000416159 CRISPLD1Q9H336 500 aa19■□□□□ 0.63
PDLIM2-208ENST00000416159 CUEDC2Q9H467 287 aa19■□□□□ 0.63
PDLIM2-208ENST00000416159 SLC27A5Q9Y2P5 690 aa19■□□□□ 0.63
PDLIM2-208ENST00000416159 PTPRZ1P23471 2315 aaPredicted RBP19■□□□□ 0.63
PDLIM2-208ENST00000416159 KPNA7A9QM74 516 aa18.99■□□□□ 0.63
PDLIM2-208ENST00000416159 CUTAO60888 179 aa18.99■□□□□ 0.63
PDLIM2-208ENST00000416159 PRPF6O94906 941 aaKnown RBP18.99■□□□□ 0.63
PDLIM2-208ENST00000416159 PNPLA4P41247 253 aa18.99■□□□□ 0.63
PDLIM2-208ENST00000416159 TUFMP49411 452 aaKnown RBP18.99■□□□□ 0.63
PDLIM2-208ENST00000416159 AMPD3Q01432 767 aa18.99■□□□□ 0.63
PDLIM2-208ENST00000416159 SMARCB1Q12824 385 aa18.99■□□□□ 0.63
PDLIM2-208ENST00000416159 SV2CQ496J9 727 aa18.99■□□□□ 0.63
PDLIM2-208ENST00000416159 OR10T2Q8NGX3 314 aa18.99■□□□□ 0.63
PDLIM2-208ENST00000416159 NKD2Q969F2 451 aaPredicted RBP18.99■□□□□ 0.63
PDLIM2-208ENST00000416159 E2F7Q96AV8 911 aa18.99■□□□□ 0.63
PDLIM2-208ENST00000416159 SAAL1Q96ER3 474 aa18.99■□□□□ 0.63
PDLIM2-208ENST00000416159 BORCS6Q96GS4 357 aa18.99■□□□□ 0.63
PDLIM2-208ENST00000416159 NELL2Q99435 816 aa18.99■□□□□ 0.63
PDLIM2-208ENST00000416159 TRMT61BQ9BVS5 477 aaKnown RBP18.99■□□□□ 0.63
PDLIM2-208ENST00000416159 LRRC3Q9BY71 257 aa18.99■□□□□ 0.63
PDLIM2-208ENST00000416159 ZCWPW1Q9H0M4 648 aa18.99■□□□□ 0.63
PDLIM2-208ENST00000416159 DNAJC25Q9H1X3 360 aa18.99■□□□□ 0.63
PDLIM2-208ENST00000416159 KBTBD4Q9NVX7 518 aa18.99■□□□□ 0.63
PDLIM2-208ENST00000416159 TCHHQ07283 1943 aa18.99■□□□□ 0.63
PDLIM2-208ENST00000416159 MIA3Q5JRA6 1907 aa18.98■□□□□ 0.63
PDLIM2-208ENST00000416159 PRR23AA6NEV1 266 aa18.98■□□□□ 0.63
PDLIM2-208ENST00000416159 NRG2O14511 850 aaPredicted RBP18.98■□□□□ 0.63
PDLIM2-208ENST00000416159 KIAA0391O15091 583 aaKnown RBP18.98■□□□□ 0.63
PDLIM2-208ENST00000416159 EXTL3O43909 919 aa18.98■□□□□ 0.63
PDLIM2-208ENST00000416159 HSP90AA1P07900 732 aaKnown RBP18.98■□□□□ 0.63
PDLIM2-208ENST00000416159 GJA1P17302 382 aa18.98■□□□□ 0.63
PDLIM2-208ENST00000416159 MAGEA9P43362 315 aa18.98■□□□□ 0.63
PDLIM2-208ENST00000416159 TFAMQ00059 246 aaKnown RBP18.98■□□□□ 0.63
PDLIM2-208ENST00000416159 UBXN2BQ14CS0 331 aa18.98■□□□□ 0.63
PDLIM2-208ENST00000416159 TEAD2Q15562 447 aa18.98■□□□□ 0.63
PDLIM2-208ENST00000416159 E2F4Q16254 413 aa18.98■□□□□ 0.63
PDLIM2-208ENST00000416159 ASCL5Q7RTU5 278 aa18.98■□□□□ 0.63
PDLIM2-208ENST00000416159 ITIH5Q86UX2 942 aa18.98■□□□□ 0.63
PDLIM2-208ENST00000416159 TMC8Q8IU68 726 aa18.98■□□□□ 0.63
PDLIM2-208ENST00000416159 C1orf210Q8IVY1 113 aa18.98■□□□□ 0.63
PDLIM2-208ENST00000416159 IQUBQ8NA54 791 aa18.98■□□□□ 0.63
PDLIM2-208ENST00000416159 ZSWIM2Q8NEG5 633 aa18.98■□□□□ 0.63
PDLIM2-208ENST00000416159 SHKBP1Q8TBC3 707 aa18.98■□□□□ 0.63
PDLIM2-208ENST00000416159 ZSCAN18Q8TBC5 510 aaPredicted RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms