RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 CYP2W1Q8TAV3 490 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 SLC10A4Q96EP9 437 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 TXLNGYQ9BZA5 131 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 PLGRKTQ9HBL7 147 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 DDX18Q9NVP1 670 aaKnown RBP8.25□□□□□ -1.09
SIK3-203ENST00000415541 AMFRQ9UKV5 643 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 ASTN2O75129 1339 aaPredicted RBP8.25□□□□□ -1.09
SIK3-203ENST00000415541 ARAP2Q8WZ64 1704 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 NPHP3-ACAD11A0A0J9YXS1 232 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 BTNL10A8MVZ5 291 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 ADAMTS3O15072 1205 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 RARGP13631 454 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 RPS12P25398 132 aaKnown RBP8.25□□□□□ -1.09
SIK3-203ENST00000415541 CALCOCO2Q13137 446 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 ASIC2Q16515 512 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 C9orf131Q5VYM1 1079 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 DUS1LQ6P1R4 473 aaKnown RBP8.25□□□□□ -1.09
SIK3-203ENST00000415541 SYT2Q8N9I0 419 aaPredicted RBP8.25□□□□□ -1.09
SIK3-203ENST00000415541 USP6NLQ92738 828 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 RNF25Q96BH1 459 aaPredicted RBP8.25□□□□□ -1.09
SIK3-203ENST00000415541 ZFRQ96KR1 1074 aaKnown RBP8.25□□□□□ -1.09
SIK3-203ENST00000415541 CGREF1Q99674 301 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 TRIM51Q9BSJ1 452 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 CELF4Q9BZC1 486 aaKnown RBP8.25□□□□□ -1.09
SIK3-203ENST00000415541 CCSER1Q9C0I3 900 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 MLXIPLQ9NP71 852 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 TMX2Q9Y320 296 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 SNX24Q9Y343 169 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 COL4A3BPQ9Y5P4 624 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 GOLGA8TH3BQL2 631 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 BOLA2-SMG1P6H3BVE0 249 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 HSPA6P17066 643 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 MAP3K10Q02779 954 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 BAATQ14032 418 aaPredicted RBP8.25□□□□□ -1.09
SIK3-203ENST00000415541 SLC45A4Q5BKX6 768 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 METTL13Q8N6R0 699 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 GIMAP8Q8ND71 665 aaPredicted RBP8.25□□□□□ -1.09
SIK3-203ENST00000415541 USP33Q8TEY7 942 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 SLC7A6OSQ96CW6 309 aaPredicted RBP8.25□□□□□ -1.09
SIK3-203ENST00000415541 WDR11Q9BZH6 1224 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 TRIM9Q9C026 710 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 TBC1D23Q9NUY8 699 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 CEP72Q9P209 647 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 DNAJB4Q9UDY4 337 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 ARMCX3Q9UH62 379 aaPredicted RBP8.25□□□□□ -1.09
SIK3-203ENST00000415541 SSX2IPQ9Y2D8 614 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 GPC6Q9Y625 555 aaPredicted RBP8.25□□□□□ -1.09
SIK3-203ENST00000415541 TIAM2Q8IVF5 1701 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 DOCK2Q92608 1830 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 SPAG7O75391 227 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 RHOBTB3O94955 611 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 SPATA31D3P0C874 917 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 CLCN2P51788 898 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 ARFIP2P53365 341 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 STK4Q13043 487 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 MTMR1Q13613 665 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 THOC5Q13769 683 aaKnown RBP8.24□□□□□ -1.09
SIK3-203ENST00000415541 CEP55Q53EZ4 464 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 ACSBG2Q5FVE4 666 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 RBM44Q6ZP01 1051 aaKnown RBP8.24□□□□□ -1.09
SIK3-203ENST00000415541 SPATA31D4Q6ZUB0 917 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 CCDC25Q86WR0 208 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 DDI1Q8WTU0 396 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 NRG4Q8WWG1 115 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 NSL1Q96IY1 281 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 DNAJC1Q96KC8 554 aaKnown RBP8.24□□□□□ -1.09
SIK3-203ENST00000415541 CCT7Q99832 543 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 OSBPL10Q9BXB5 764 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 DNAJC18Q9H819 358 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 DMTF1Q9Y222 760 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.24□□□□□ -1.09
SIK3-203ENST00000415541 ANKRD36CQ5JPF3 1778 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 MYPNQ86TC9 1320 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 KANSL1LA0AUZ9 987 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 ESYT2A0FGR8 921 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 TXNDC9O14530 226 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 NDUFB5O43674 189 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 HAUS5O94927 633 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 CBX6O95503 412 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 CLPTM1O96005 669 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 EGFRP00533 1210 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 CDK4P11802 303 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 NR2F2P24468 414 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 STIP1P31948 543 aaKnown RBP8.24□□□□□ -1.09
SIK3-203ENST00000415541 TAF1BQ53T94 588 aaPredicted RBP8.24□□□□□ -1.09
SIK3-203ENST00000415541 C3orf62Q6ZUJ4 267 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 WDR75Q8IWA0 830 aaKnown RBP8.24□□□□□ -1.09
SIK3-203ENST00000415541 RAD54LQ92698 747 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 NDEL1Q9GZM8 345 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 MAGEF1Q9HAY2 307 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 INIPQ9NRY2 104 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 EMILIN3Q9NT22 766 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 PHTF1Q9UMS5 762 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 CHKBQ9Y259 395 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 STXBP5LQ9Y2K9 1186 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 MYH3P11055 1940 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 E9PBE3 544 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 F8W8V4 182 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 K7ENM7 598 aa8.24□□□□□ -1.09
SIK3-203ENST00000415541 RIPK2O43353 540 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms