RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 RBM41Q96IZ5 413 aaKnown RBP10.37□□□□□ -0.75
CD44-206ENST00000415148 CEP170P1Q96L14 293 aa10.37□□□□□ -0.75
CD44-206ENST00000415148 RAB3IPQ96QF0 476 aaPredicted RBP10.37□□□□□ -0.75
CD44-206ENST00000415148 RBM15Q96T37 977 aaKnown RBP eCLIP10.37□□□□□ -0.75
CD44-206ENST00000415148 FAM213AQ9BRX8 229 aa10.37□□□□□ -0.75
CD44-206ENST00000415148 GLIS2Q9BZE0 524 aaPredicted RBP10.37□□□□□ -0.75
CD44-206ENST00000415148 GINM1Q9NU53 330 aa10.37□□□□□ -0.75
CD44-206ENST00000415148 PARVAQ9NVD7 372 aa10.37□□□□□ -0.75
CD44-206ENST00000415148 IP6K2Q9UHH9 426 aa10.37□□□□□ -0.75
CD44-206ENST00000415148 STYXL1Q9Y6J8 313 aa10.37□□□□□ -0.75
CD44-206ENST00000415148 RASA4BC9J798 803 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 DNALI1O14645 258 aaPredicted RBP10.36□□□□□ -0.75
CD44-206ENST00000415148 HNRNPDLO14979 420 aaKnown RBP10.36□□□□□ -0.75
CD44-206ENST00000415148 RASA4O43374 803 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 SMNDC1O75940 238 aaKnown RBP eCLIP10.36□□□□□ -0.75
CD44-206ENST00000415148 STBD1O95210 358 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 ASMTLO95671 621 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 FGFR1P11362 822 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 EIF2AK2P19525 551 aaKnown RBP10.36□□□□□ -0.75
CD44-206ENST00000415148 ACO1P21399 889 aaKnown RBP10.36□□□□□ -0.75
CD44-206ENST00000415148 TARSP26639 723 aaKnown RBP10.36□□□□□ -0.75
CD44-206ENST00000415148 GCAP28676 217 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 SSTR3P32745 418 aaPredicted RBP10.36□□□□□ -0.75
CD44-206ENST00000415148 PEX19P40855 299 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 CCNG1P51959 295 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 NOMO3P69849 1222 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 MCL1Q07820 350 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 PARP6Q2NL67 630 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 CDCA2Q69YH5 1023 aaPredicted RBP10.36□□□□□ -0.75
CD44-206ENST00000415148 GSTA5Q7RTV2 222 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 NLRX1Q86UT6 975 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 TRABD2AQ86V40 505 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 GLIS1Q8NBF1 620 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 FEZF2Q8TBJ5 459 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 DENND1AQ8TEH3 1009 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 FBF1Q8TES7 1133 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 ANKRD27Q96NW4 1050 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 FNBP1Q96RU3 617 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 RMDN3Q96TC7 470 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 PAIP2Q9BPZ3 127 aaKnown RBP10.36□□□□□ -0.75
CD44-206ENST00000415148 PI4K2AQ9BTU6 479 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 KIAA1683Q9H0B3 1180 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 ETNK1Q9HBU6 452 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 TXLNGQ9NUQ3 528 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 ARHGAP28Q9P2N2 729 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.36□□□□□ -0.75
CD44-206ENST00000415148 PGAP2Q9UHJ9 254 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 SMG5Q9UPR3 1016 aaKnown RBP10.36□□□□□ -0.75
CD44-206ENST00000415148 GSTTP1A0A1W2PQM5 241 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 LIASO43766 372 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 PIAS1O75925 651 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 TJP3O95049 919 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 UNC5CO95185 931 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 HLA-DRAP01903 254 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 MYCLP12524 364 aaPredicted RBP10.36□□□□□ -0.75
CD44-206ENST00000415148 TBXAS1P24557 533 aaPredicted RBP10.36□□□□□ -0.75
CD44-206ENST00000415148 PTPN7P35236 360 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 TUBP50607 506 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 YARSP54577 528 aaKnown RBP10.36□□□□□ -0.75
CD44-206ENST00000415148 TAS2R40P59535 323 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 LACTBP83111 547 aaPredicted RBP10.36□□□□□ -0.75
CD44-206ENST00000415148 NFX1Q12986 1120 aaKnown RBP10.36□□□□□ -0.75
CD44-206ENST00000415148 ZC3H12AQ5D1E8 599 aaKnown RBP10.36□□□□□ -0.75
CD44-206ENST00000415148 ZNF772Q68DY9 489 aaPredicted RBP10.36□□□□□ -0.75
CD44-206ENST00000415148 LBHD1Q9BQE6 289 aaPredicted RBP10.36□□□□□ -0.75
CD44-206ENST00000415148 KIFC3Q9BVG8 833 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 ZNF341Q9BYN7 854 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 QTRT2Q9H974 415 aaKnown RBP10.36□□□□□ -0.75
CD44-206ENST00000415148 SSU72Q9NP77 194 aaKnown RBP10.36□□□□□ -0.75
CD44-206ENST00000415148 FETUBQ9UGM5 382 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 HAO1Q9UJM8 370 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 CHKBQ9Y259 395 aa10.36□□□□□ -0.75
CD44-206ENST00000415148 LDHAP00338 332 aaKnown RBP10.35□□□□□ -0.75
CD44-206ENST00000415148 PSAPP07602 524 aa10.35□□□□□ -0.75
CD44-206ENST00000415148 LINGO3P0C6S8 592 aa10.35□□□□□ -0.75
CD44-206ENST00000415148 CCND2P30279 289 aa10.35□□□□□ -0.75
CD44-206ENST00000415148 ATP11AP98196 1134 aa10.35□□□□□ -0.75
CD44-206ENST00000415148 GRIK3Q13003 919 aa10.35□□□□□ -0.75
CD44-206ENST00000415148 DNAJC3Q13217 504 aa10.35□□□□□ -0.75
CD44-206ENST00000415148 CUL2Q13617 745 aa10.35□□□□□ -0.75
CD44-206ENST00000415148 SPARCL1Q14515 664 aa10.35□□□□□ -0.75
CD44-206ENST00000415148 MORF4L2Q15014 288 aa10.35□□□□□ -0.75
CD44-206ENST00000415148 SETDB1Q15047 1291 aa10.35□□□□□ -0.75
CD44-206ENST00000415148 P3H1Q32P28 736 aa10.35□□□□□ -0.75
CD44-206ENST00000415148 EAPPQ56P03 285 aaPredicted RBP10.35□□□□□ -0.75
CD44-206ENST00000415148 ARHGEF16Q5VV41 709 aa10.35□□□□□ -0.75
CD44-206ENST00000415148 SLFN12LQ6IEE8 588 aa10.35□□□□□ -0.75
CD44-206ENST00000415148 MIS18BP1Q6P0N0 1132 aa10.35□□□□□ -0.75
CD44-206ENST00000415148 VSIG10LQ86VR7 867 aa10.35□□□□□ -0.75
CD44-206ENST00000415148 CPXCR1Q8N123 301 aa10.35□□□□□ -0.75
CD44-206ENST00000415148 TTC8Q8TAM2 541 aa10.35□□□□□ -0.75
CD44-206ENST00000415148 BICD1Q96G01 975 aa10.35□□□□□ -0.75
CD44-206ENST00000415148 PHACTR1Q9C0D0 580 aa10.35□□□□□ -0.75
CD44-206ENST00000415148 RAVER2Q9HCJ3 691 aaKnown RBP10.35□□□□□ -0.75
CD44-206ENST00000415148 ZNF219Q9P2Y4 722 aaPredicted RBP10.35□□□□□ -0.75
CD44-206ENST00000415148 SLC24A2Q9UI40 661 aa10.35□□□□□ -0.75
CD44-206ENST00000415148 USH1CQ9Y6N9 552 aa10.35□□□□□ -0.75
CD44-206ENST00000415148 ARID2Q68CP9 1835 aa10.35□□□□□ -0.75
CD44-206ENST00000415148 EXOC1LA0A1B0GW35 172 aa10.34□□□□□ -0.75
CD44-206ENST00000415148 ALOX15BO15296 676 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms