RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 CEP63Q96MT8 703 aa18.3■□□□□ 0.52
SCAMP4-204ENST00000414057 STRA6Q9BX79 667 aa18.3■□□□□ 0.52
SCAMP4-204ENST00000414057 MFSD1Q9H3U5 465 aa18.3■□□□□ 0.52
SCAMP4-204ENST00000414057 KCNK12Q9HB15 430 aa18.3■□□□□ 0.52
SCAMP4-204ENST00000414057 EPS15L1Q9UBC2 864 aa18.3■□□□□ 0.52
SCAMP4-204ENST00000414057 MTRRQ9UBK8 725 aa18.3■□□□□ 0.52
SCAMP4-204ENST00000414057 NUB1Q9Y5A7 615 aa18.3■□□□□ 0.52
SCAMP4-204ENST00000414057 BACE2Q9Y5Z0 518 aa18.3■□□□□ 0.52
SCAMP4-204ENST00000414057 ZFP37Q9Y6Q3 630 aaPredicted RBP18.3■□□□□ 0.52
SCAMP4-204ENST00000414057 A0A1B0GTH6 734 aa18.29■□□□□ 0.52
SCAMP4-204ENST00000414057 KCNJ18B7U540 433 aa18.29■□□□□ 0.52
SCAMP4-204ENST00000414057 PODXLO00592 558 aa18.29■□□□□ 0.52
SCAMP4-204ENST00000414057 ABLIM1O14639 778 aa18.29■□□□□ 0.52
SCAMP4-204ENST00000414057 CALUO43852 315 aaPredicted RBP18.29■□□□□ 0.52
SCAMP4-204ENST00000414057 XYLBO75191 536 aa18.29■□□□□ 0.52
SCAMP4-204ENST00000414057 C8AP07357 584 aa18.29■□□□□ 0.52
SCAMP4-204ENST00000414057 TPM2P07951 284 aa18.29■□□□□ 0.52
SCAMP4-204ENST00000414057 NHLH1Q02575 133 aa18.29■□□□□ 0.52
SCAMP4-204ENST00000414057 MCL1Q07820 350 aa18.29■□□□□ 0.52
SCAMP4-204ENST00000414057 KCNJ12Q14500 433 aa18.29■□□□□ 0.52
SCAMP4-204ENST00000414057 NFIL3Q16649 462 aa18.29■□□□□ 0.52
SCAMP4-204ENST00000414057 HAUS6Q7Z4H7 955 aa18.29■□□□□ 0.52
SCAMP4-204ENST00000414057 GOLGA5Q8TBA6 731 aa18.29■□□□□ 0.52
SCAMP4-204ENST00000414057 FEZF2Q8TBJ5 459 aa18.29■□□□□ 0.52
SCAMP4-204ENST00000414057 TRIM44Q96DX7 344 aaPredicted RBP18.29■□□□□ 0.52
SCAMP4-204ENST00000414057 FGFBP2Q9BYJ0 223 aa18.29■□□□□ 0.52
SCAMP4-204ENST00000414057 PLEKHA5Q9HAU0 1116 aa18.29■□□□□ 0.52
SCAMP4-204ENST00000414057 GOLGA2P5Q9HBQ8 144 aa18.29■□□□□ 0.52
SCAMP4-204ENST00000414057 CGNQ9P2M7 1197 aaKnown RBP18.29■□□□□ 0.52
SCAMP4-204ENST00000414057 K7ENM7 598 aa18.28■□□□□ 0.52
SCAMP4-204ENST00000414057 SYN3O14994 580 aa18.28■□□□□ 0.52
SCAMP4-204ENST00000414057 PPP1R37O75864 691 aa18.28■□□□□ 0.52
SCAMP4-204ENST00000414057 GNA14O95837 355 aa18.28■□□□□ 0.52
SCAMP4-204ENST00000414057 CLTAP09496 248 aa18.28■□□□□ 0.52
SCAMP4-204ENST00000414057 OR1D2P34982 312 aa18.28■□□□□ 0.52
SCAMP4-204ENST00000414057 LIG4P49917 911 aa18.28■□□□□ 0.52
SCAMP4-204ENST00000414057 CASP5P51878 434 aa18.28■□□□□ 0.52
SCAMP4-204ENST00000414057 SNRPFP62306 86 aaKnown RBP18.28■□□□□ 0.52
SCAMP4-204ENST00000414057 ZC3H3Q8IXZ2 948 aaKnown RBP18.28■□□□□ 0.52
SCAMP4-204ENST00000414057 DRC7Q8IY82 874 aa18.28■□□□□ 0.52
SCAMP4-204ENST00000414057 ZBTB45Q96K62 511 aaPredicted RBP18.28■□□□□ 0.52
SCAMP4-204ENST00000414057 ZMAT2Q96NC0 199 aaKnown RBP18.28■□□□□ 0.52
SCAMP4-204ENST00000414057 TMEM206Q9H813 350 aa18.28■□□□□ 0.52
SCAMP4-204ENST00000414057 IMPACTQ9P2X3 320 aa18.28■□□□□ 0.52
SCAMP4-204ENST00000414057 DUSP12Q9UNI6 340 aa18.28■□□□□ 0.52
SCAMP4-204ENST00000414057 H7C4K7 107 aa18.27■□□□□ 0.52
SCAMP4-204ENST00000414057 HNRNPDLO14979 420 aaKnown RBP18.27■□□□□ 0.52
SCAMP4-204ENST00000414057 PTMAP06454 111 aaKnown RBP18.27■□□□□ 0.52
SCAMP4-204ENST00000414057 POU2F2P09086 479 aa18.27■□□□□ 0.52
SCAMP4-204ENST00000414057 RPL13P26373 211 aaKnown RBP18.27■□□□□ 0.52
SCAMP4-204ENST00000414057 TKTP29401 623 aaKnown RBP18.27■□□□□ 0.52
SCAMP4-204ENST00000414057 NMT1P30419 496 aaKnown RBP18.27■□□□□ 0.52
SCAMP4-204ENST00000414057 GTF2BQ00403 316 aa18.27■□□□□ 0.52
SCAMP4-204ENST00000414057 GET4Q7L5D6 327 aaPredicted RBP18.27■□□□□ 0.52
SCAMP4-204ENST00000414057 APTXQ7Z2E3 356 aaKnown RBP18.27■□□□□ 0.52
SCAMP4-204ENST00000414057 IRF2BP1Q8IU81 584 aa18.27■□□□□ 0.52
SCAMP4-204ENST00000414057 NELFCDQ8IXH7 590 aa18.27■□□□□ 0.52
SCAMP4-204ENST00000414057 TSPAN18Q96SJ8 248 aa18.27■□□□□ 0.52
SCAMP4-204ENST00000414057 CDY1Q9Y6F8 540 aa18.27■□□□□ 0.52
SCAMP4-204ENST00000414057 DENND4AQ7Z401 1863 aa18.27■□□□□ 0.52
SCAMP4-204ENST00000414057 XPOTO43592 962 aaKnown RBP18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 PRPF6O94906 941 aaKnown RBP18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 LAMP2P13473 410 aa18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 FSHRP23945 695 aa18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 BRCC3P46736 316 aa18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 SOX4Q06945 474 aaPredicted RBP18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 KRT31Q15323 416 aa18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 SLC10A6Q3KNW5 377 aa18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 HSP90AA4PQ58FG1 418 aa18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 HS2ST1Q7LGA3 356 aa18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 FILIP1Q7Z7B0 1213 aa18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 C3orf58Q8NDZ4 430 aa18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 TMEM174Q8WUU8 243 aa18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 FBXL21Q9UKT6 434 aa18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 TBX20Q9UMR3 447 aa18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 POLIQ9UNA4 740 aa18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 EXOC7Q9UPT5 735 aa18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 PLXNA3P51805 1871 aa18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 CETN3O15182 167 aa18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 N4BP1O75113 896 aaKnown RBP18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 ELF1P32519 619 aa18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 HOXD13P35453 343 aa18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 CLCN5P51795 746 aa18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 VCPP55072 806 aaKnown RBP18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 PPP2R3AQ06190 1150 aa18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 MYBPC2Q14324 1141 aa18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 NR1I3Q14994 352 aa18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 IER5LQ5T953 404 aa18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 CD300LGQ6UXG3 332 aa18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 APPL2Q8NEU8 664 aa18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 PRSS33Q8NF86 280 aa18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 SLC7A14Q8TBB6 771 aa18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 CNOT6LQ96LI5 555 aaKnown RBP18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 NAP1L5Q96NT1 182 aaPredicted RBP18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 ACCSQ96QU6 501 aa18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 MYADMQ96S97 322 aa18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 SMOC2Q9H3U7 446 aa18.26■□□□□ 0.51
SCAMP4-204ENST00000414057 I3L4J1 428 aa18.25■□□□□ 0.51
SCAMP4-204ENST00000414057 ADAM12O43184 909 aa18.25■□□□□ 0.51
SCAMP4-204ENST00000414057 PDGFBP01127 241 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms