RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 CSRP2Q16527 193 aa13.25□□□□□ -0.29
LIMS2-210ENST00000413578 KRT79Q5XKE5 535 aa13.25□□□□□ -0.29
LIMS2-210ENST00000413578 CENPPQ6IPU0 288 aa13.25□□□□□ -0.29
LIMS2-210ENST00000413578 Q6ZS52 159 aa13.25□□□□□ -0.29
LIMS2-210ENST00000413578 LONP2Q86WA8 852 aa13.25□□□□□ -0.29
LIMS2-210ENST00000413578 RAB34Q9BZG1 259 aa13.25□□□□□ -0.29
LIMS2-210ENST00000413578 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.25□□□□□ -0.29
LIMS2-210ENST00000413578 OBP2AQ9NY56 170 aa13.25□□□□□ -0.29
LIMS2-210ENST00000413578 ANKFY1Q9P2R3 1169 aa13.25□□□□□ -0.29
LIMS2-210ENST00000413578 NOL7Q9UMY1 257 aaKnown RBP13.25□□□□□ -0.29
LIMS2-210ENST00000413578 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.25□□□□□ -0.29
LIMS2-210ENST00000413578 MAP1BP46821 2468 aaKnown RBP13.25□□□□□ -0.29
LIMS2-210ENST00000413578 USP24Q9UPU5 2620 aa13.25□□□□□ -0.29
LIMS2-210ENST00000413578 MTMR11A4FU01 709 aa13.24□□□□□ -0.29
LIMS2-210ENST00000413578 SLC38A8A6NNN8 435 aa13.24□□□□□ -0.29
LIMS2-210ENST00000413578 SPECC1L-ADORA2AF8WAN1 911 aa13.24□□□□□ -0.29
LIMS2-210ENST00000413578 PPEF2O14830 753 aa13.24□□□□□ -0.29
LIMS2-210ENST00000413578 CLDN3O15551 220 aa13.24□□□□□ -0.29
LIMS2-210ENST00000413578 TYMPP19971 482 aa13.24□□□□□ -0.29
LIMS2-210ENST00000413578 MARCKSP29966 332 aaPredicted RBP13.24□□□□□ -0.29
LIMS2-210ENST00000413578 WEE1P30291 646 aa13.24□□□□□ -0.29
LIMS2-210ENST00000413578 SPAG1Q07617 926 aa13.24□□□□□ -0.29
LIMS2-210ENST00000413578 STRN3Q13033 797 aa13.24□□□□□ -0.29
LIMS2-210ENST00000413578 SRSF5Q13243 272 aaKnown RBP13.24□□□□□ -0.29
LIMS2-210ENST00000413578 CCINQ13939 588 aa13.24□□□□□ -0.29
LIMS2-210ENST00000413578 SIM2Q14190 667 aaPredicted RBP13.24□□□□□ -0.29
LIMS2-210ENST00000413578 MYBPC2Q14324 1141 aa13.24□□□□□ -0.29
LIMS2-210ENST00000413578 LRRC32Q14392 662 aa13.24□□□□□ -0.29
LIMS2-210ENST00000413578 PRR23CQ6ZRP0 262 aa13.24□□□□□ -0.29
LIMS2-210ENST00000413578 PRR23BQ6ZRT6 265 aa13.24□□□□□ -0.29
LIMS2-210ENST00000413578 RALGPS2Q86X27 583 aaPredicted RBP13.24□□□□□ -0.29
LIMS2-210ENST00000413578 ARID3BQ8IVW6 561 aaPredicted RBP13.24□□□□□ -0.29
LIMS2-210ENST00000413578 KCTD17Q8N5Z5 321 aa13.24□□□□□ -0.29
LIMS2-210ENST00000413578 TTC9BQ8N6N2 239 aa13.24□□□□□ -0.29
LIMS2-210ENST00000413578 PSMG2Q969U7 264 aa13.24□□□□□ -0.29
LIMS2-210ENST00000413578 PGLYRP2Q96PD5 576 aa13.24□□□□□ -0.29
LIMS2-210ENST00000413578 PNMA5Q96PV4 448 aa13.24□□□□□ -0.29
LIMS2-210ENST00000413578 SLITRK6Q9H5Y7 841 aa13.24□□□□□ -0.29
LIMS2-210ENST00000413578 HSFX1Q9UBD0 423 aa13.24□□□□□ -0.29
LIMS2-210ENST00000413578 UBQLN1Q9UMX0 589 aaKnown RBP13.24□□□□□ -0.29
LIMS2-210ENST00000413578 ASB3Q9Y575 518 aa13.24□□□□□ -0.29
LIMS2-210ENST00000413578 TICRRQ7Z2Z1 1910 aa13.23□□□□□ -0.29
LIMS2-210ENST00000413578 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.23□□□□□ -0.29
LIMS2-210ENST00000413578 GDF9O60383 454 aa13.23□□□□□ -0.29
LIMS2-210ENST00000413578 HOXC13P31276 330 aa13.23□□□□□ -0.29
LIMS2-210ENST00000413578 TNFSF9P41273 254 aa13.23□□□□□ -0.29
LIMS2-210ENST00000413578 GUCY2FP51841 1108 aa13.23□□□□□ -0.29
LIMS2-210ENST00000413578 SMTNP53814 917 aa13.23□□□□□ -0.29
LIMS2-210ENST00000413578 SLC12A3P55017 1021 aa13.23□□□□□ -0.29
LIMS2-210ENST00000413578 NCKAP1LP55160 1127 aa13.23□□□□□ -0.29
LIMS2-210ENST00000413578 PPM1JQ5JR12 505 aa13.23□□□□□ -0.29
LIMS2-210ENST00000413578 DGKKQ5KSL6 1271 aa13.23□□□□□ -0.29
LIMS2-210ENST00000413578 DNAJB7Q7Z6W7 309 aaPredicted RBP13.23□□□□□ -0.29
LIMS2-210ENST00000413578 YAF2Q8IY57 180 aa13.23□□□□□ -0.29
LIMS2-210ENST00000413578 SYT2Q8N9I0 419 aaPredicted RBP13.23□□□□□ -0.29
LIMS2-210ENST00000413578 ATAD1Q8NBU5 361 aa13.23□□□□□ -0.29
LIMS2-210ENST00000413578 CSGALNACT1Q8TDX6 532 aa13.23□□□□□ -0.29
LIMS2-210ENST00000413578 KIF12Q96FN5 646 aa13.23□□□□□ -0.29
LIMS2-210ENST00000413578 TMEM209Q96SK2 561 aa13.23□□□□□ -0.29
LIMS2-210ENST00000413578 GTSE1Q9NYZ3 720 aa13.23□□□□□ -0.29
LIMS2-210ENST00000413578 KCNG1Q9UIX4 513 aa13.23□□□□□ -0.29
LIMS2-210ENST00000413578 CNOT1A5YKK6 2376 aaKnown RBP13.22□□□□□ -0.29
LIMS2-210ENST00000413578 LACTBL1A8MY62 500 aa13.22□□□□□ -0.29
LIMS2-210ENST00000413578 SEC24BO95487 1268 aa13.22□□□□□ -0.29
LIMS2-210ENST00000413578 PRAMEF12O95522 483 aa13.22□□□□□ -0.29
LIMS2-210ENST00000413578 PIGRP01833 764 aa13.22□□□□□ -0.29
LIMS2-210ENST00000413578 KPNA1P52294 538 aaPredicted RBP13.22□□□□□ -0.29
LIMS2-210ENST00000413578 EPHB3P54753 998 aa13.22□□□□□ -0.29
LIMS2-210ENST00000413578 CACNB1Q02641 598 aaPredicted RBP13.22□□□□□ -0.29
LIMS2-210ENST00000413578 RAD51AP2Q09MP3 1159 aa13.22□□□□□ -0.29
LIMS2-210ENST00000413578 GNL2Q13823 731 aaKnown RBP13.22□□□□□ -0.29
LIMS2-210ENST00000413578 ENOX2Q16206 610 aaKnown RBP13.22□□□□□ -0.29
LIMS2-210ENST00000413578 ARHGAP29Q52LW3 1261 aa13.22□□□□□ -0.29
LIMS2-210ENST00000413578 WDR5BQ86VZ2 330 aa13.22□□□□□ -0.29
LIMS2-210ENST00000413578 SYNPOQ8N3V7 929 aa13.22□□□□□ -0.29
LIMS2-210ENST00000413578 OR10T2Q8NGX3 314 aa13.22□□□□□ -0.29
LIMS2-210ENST00000413578 CHFRQ96EP1 664 aa13.22□□□□□ -0.29
LIMS2-210ENST00000413578 ZFYVE19Q96K21 471 aa13.22□□□□□ -0.29
LIMS2-210ENST00000413578 TSPAN18Q96SJ8 248 aa13.22□□□□□ -0.29
LIMS2-210ENST00000413578 IL21Q9HBE4 155 aa13.22□□□□□ -0.29
LIMS2-210ENST00000413578 KCND2Q9NZV8 630 aa13.22□□□□□ -0.29
LIMS2-210ENST00000413578 SLC27A5Q9Y2P5 690 aa13.22□□□□□ -0.29
LIMS2-210ENST00000413578 TM4SF5O14894 197 aa13.21□□□□□ -0.29
LIMS2-210ENST00000413578 FOXD2O60548 495 aaPredicted RBP13.21□□□□□ -0.29
LIMS2-210ENST00000413578 SOAT2O75908 522 aa13.21□□□□□ -0.29
LIMS2-210ENST00000413578 CYP11A1P05108 521 aa13.21□□□□□ -0.29
LIMS2-210ENST00000413578 ALDH1A3P47895 512 aa13.21□□□□□ -0.29
LIMS2-210ENST00000413578 LILRA4P59901 499 aa13.21□□□□□ -0.29
LIMS2-210ENST00000413578 ATP2C1P98194 919 aaPredicted RBP13.21□□□□□ -0.29
LIMS2-210ENST00000413578 PPP2R3AQ06190 1150 aa13.21□□□□□ -0.29
LIMS2-210ENST00000413578 TNK2Q07912 1038 aa13.21□□□□□ -0.29
LIMS2-210ENST00000413578 TMEM119Q4V9L6 283 aa13.21□□□□□ -0.29
LIMS2-210ENST00000413578 ARSHQ5FYA8 562 aa13.21□□□□□ -0.29
LIMS2-210ENST00000413578 SPATA1Q5VX52 437 aa13.21□□□□□ -0.29
LIMS2-210ENST00000413578 OVOS1Q6IE37 1185 aa13.21□□□□□ -0.29
LIMS2-210ENST00000413578 DTHD1Q6ZMT9 781 aa13.21□□□□□ -0.29
LIMS2-210ENST00000413578 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.21□□□□□ -0.29
LIMS2-210ENST00000413578 USP37Q86T82 979 aa13.21□□□□□ -0.29
LIMS2-210ENST00000413578 GPIHBP1Q8IV16 184 aa13.21□□□□□ -0.29
LIMS2-210ENST00000413578 FAM160A2Q8N612 972 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms