RNA–Protein interactions for RNA: ENST00000412947.5

ZNF3-204, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best)

Gene ZNF3, Length 595 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-204ENST00000412947 GDAP2Q9NXN4 497 aa13.61□□□□□ -0.23
ZNF3-204ENST00000412947 TIMM13Q9Y5L4 95 aaPredicted RBP13.61□□□□□ -0.23
ZNF3-204ENST00000412947 IRAK3Q9Y616 596 aa13.61□□□□□ -0.23
ZNF3-204ENST00000412947 LILRB3O75022 631 aa13.6□□□□□ -0.23
ZNF3-204ENST00000412947 VNN1O95497 513 aa13.6□□□□□ -0.23
ZNF3-204ENST00000412947 ASS1P00966 412 aaKnown RBP13.6□□□□□ -0.23
ZNF3-204ENST00000412947 ADH1AP07327 375 aa13.6□□□□□ -0.23
ZNF3-204ENST00000412947 P4HA1P13674 534 aa13.6□□□□□ -0.23
ZNF3-204ENST00000412947 PRKCSHP14314 528 aaPredicted RBP13.6□□□□□ -0.23
ZNF3-204ENST00000412947 NRIP1P48552 1158 aa13.6□□□□□ -0.23
ZNF3-204ENST00000412947 TPM4P67936 248 aa13.6□□□□□ -0.23
ZNF3-204ENST00000412947 MAN2A1Q16706 1144 aa13.6□□□□□ -0.23
ZNF3-204ENST00000412947 DUSP6Q16828 381 aa13.6□□□□□ -0.23
ZNF3-204ENST00000412947 WDR72Q3MJ13 1102 aa13.6□□□□□ -0.23
ZNF3-204ENST00000412947 CTXN3Q4LDR2 81 aa13.6□□□□□ -0.23
ZNF3-204ENST00000412947 TCP11X2Q5H9J9 407 aa13.6□□□□□ -0.23
ZNF3-204ENST00000412947 ZNF667Q5HYK9 610 aa13.6□□□□□ -0.23
ZNF3-204ENST00000412947 WDR44Q5JSH3 913 aa13.6□□□□□ -0.23
ZNF3-204ENST00000412947 CDKAL1Q5VV42 579 aa13.6□□□□□ -0.23
ZNF3-204ENST00000412947 OVOS1Q6IE37 1185 aa13.6□□□□□ -0.23
ZNF3-204ENST00000412947 ZNF280DQ6N043 979 aa13.6□□□□□ -0.23
ZNF3-204ENST00000412947 ADGRD2Q7Z7M1 963 aa13.6□□□□□ -0.23
ZNF3-204ENST00000412947 TOP6BLQ8N6T0 577 aa13.6□□□□□ -0.23
ZNF3-204ENST00000412947 LNX1Q8TBB1 728 aaPredicted RBP13.6□□□□□ -0.23
ZNF3-204ENST00000412947 MMS19Q96T76 1030 aa13.6□□□□□ -0.23
ZNF3-204ENST00000412947 CDCA3Q99618 268 aaPredicted RBP13.6□□□□□ -0.23
ZNF3-204ENST00000412947 TUBGCP2Q9BSJ2 902 aa13.6□□□□□ -0.23
ZNF3-204ENST00000412947 OXCT2Q9BYC2 517 aaPredicted RBP13.6□□□□□ -0.23
ZNF3-204ENST00000412947 XYLT2Q9H1B5 865 aa13.6□□□□□ -0.23
ZNF3-204ENST00000412947 TSPY26PQ9H489 355 aa13.6□□□□□ -0.23
ZNF3-204ENST00000412947 VRTNQ9H8Y1 702 aa13.6□□□□□ -0.23
ZNF3-204ENST00000412947 RAB20Q9NX57 234 aa13.6□□□□□ -0.23
ZNF3-204ENST00000412947 FNIP2Q9P278 1114 aa13.6□□□□□ -0.23
ZNF3-204ENST00000412947 NXF1Q9UBU9 619 aaKnown RBP13.6□□□□□ -0.23
ZNF3-204ENST00000412947 BACE2Q9Y5Z0 518 aa13.6□□□□□ -0.23
ZNF3-204ENST00000412947 FSD2A1L4K1 749 aa13.59□□□□□ -0.23
ZNF3-204ENST00000412947 PES1O00541 588 aaKnown RBP13.59□□□□□ -0.23
ZNF3-204ENST00000412947 P4HA2O15460 535 aa13.59□□□□□ -0.23
ZNF3-204ENST00000412947 CYP11A1P05108 521 aa13.59□□□□□ -0.23
ZNF3-204ENST00000412947 CNPP09543 421 aaKnown RBP13.59□□□□□ -0.23
ZNF3-204ENST00000412947 CDK11BP21127 795 aaKnown RBP13.59□□□□□ -0.23
ZNF3-204ENST00000412947 KLRC2P26717 231 aa13.59□□□□□ -0.23
ZNF3-204ENST00000412947 NOP14P78316 857 aaKnown RBP13.59□□□□□ -0.23
ZNF3-204ENST00000412947 NCAPHQ15003 741 aa13.59□□□□□ -0.23
ZNF3-204ENST00000412947 VWA3BQ502W6 1294 aa13.59□□□□□ -0.23
ZNF3-204ENST00000412947 WSCD1Q658N2 575 aa13.59□□□□□ -0.23
ZNF3-204ENST00000412947 LRSAM1Q6UWE0 723 aa13.59□□□□□ -0.23
ZNF3-204ENST00000412947 DPH6Q7L8W6 267 aa13.59□□□□□ -0.23
ZNF3-204ENST00000412947 RBM23Q86U06 439 aaKnown RBP13.59□□□□□ -0.23
ZNF3-204ENST00000412947 PPFIBP1Q86W92 1011 aa13.59□□□□□ -0.23
ZNF3-204ENST00000412947 DHX40Q8IX18 779 aaKnown RBP13.59□□□□□ -0.23
ZNF3-204ENST00000412947 ADGRF2Q8IZF7 708 aa13.59□□□□□ -0.23
ZNF3-204ENST00000412947 THEM5Q8N1Q8 247 aa13.59□□□□□ -0.23
ZNF3-204ENST00000412947 TMEM86AQ8N2M4 240 aa13.59□□□□□ -0.23
ZNF3-204ENST00000412947 PDCL2Q8N4E4 241 aa13.59□□□□□ -0.23
ZNF3-204ENST00000412947 SPATA18Q8TC71 538 aa13.59□□□□□ -0.23
ZNF3-204ENST00000412947 KLHL5Q96PQ7 755 aa13.59□□□□□ -0.23
ZNF3-204ENST00000412947 PI4K2AQ9BTU6 479 aa13.59□□□□□ -0.23
ZNF3-204ENST00000412947 RXFP1Q9HBX9 757 aa13.59□□□□□ -0.23
ZNF3-204ENST00000412947 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.59□□□□□ -0.23
ZNF3-204ENST00000412947 MTRRQ9UBK8 725 aa13.59□□□□□ -0.23
ZNF3-204ENST00000412947 COQ4Q9Y3A0 265 aa13.59□□□□□ -0.23
ZNF3-204ENST00000412947 PER2O15055 1255 aa13.58□□□□□ -0.24
ZNF3-204ENST00000412947 PMM2O15305 246 aa13.58□□□□□ -0.24
ZNF3-204ENST00000412947 TEX28O15482 410 aa13.58□□□□□ -0.24
ZNF3-204ENST00000412947 NCK2O43639 380 aa13.58□□□□□ -0.24
ZNF3-204ENST00000412947 CLASP2O75122 1294 aaKnown RBP13.58□□□□□ -0.24
ZNF3-204ENST00000412947 OAZ2O95190 189 aa13.58□□□□□ -0.24
ZNF3-204ENST00000412947 RPL17P18621 184 aaKnown RBP13.58□□□□□ -0.24
ZNF3-204ENST00000412947 NDUFV1P49821 464 aa13.58□□□□□ -0.24
ZNF3-204ENST00000412947 HYAL1Q12794 435 aa13.58□□□□□ -0.24
ZNF3-204ENST00000412947 MRPL58Q14197 206 aaKnown RBP13.58□□□□□ -0.24
ZNF3-204ENST00000412947 CCDC85BQ15834 202 aaPredicted RBP13.58□□□□□ -0.24
ZNF3-204ENST00000412947 SPOPLQ6IQ16 392 aa13.58□□□□□ -0.24
ZNF3-204ENST00000412947 GLYCTKQ8IVS8 523 aa13.58□□□□□ -0.24
ZNF3-204ENST00000412947 PPM1EQ8WY54 764 aa13.58□□□□□ -0.24
ZNF3-204ENST00000412947 SEMA4DQ92854 862 aa13.58□□□□□ -0.24
ZNF3-204ENST00000412947 IGFLR1Q9H665 355 aa13.58□□□□□ -0.24
ZNF3-204ENST00000412947 CBX8Q9HC52 389 aa13.58□□□□□ -0.24
ZNF3-204ENST00000412947 TAB2Q9NYJ8 693 aa13.58□□□□□ -0.24
ZNF3-204ENST00000412947 FBXL5Q9UKA1 691 aa13.58□□□□□ -0.24
ZNF3-204ENST00000412947 L1RE1Q9UN81 338 aa13.58□□□□□ -0.24
ZNF3-204ENST00000412947 POLIQ9UNA4 740 aa13.58□□□□□ -0.24
ZNF3-204ENST00000412947 STXBP5LQ9Y2K9 1186 aa13.58□□□□□ -0.24
ZNF3-204ENST00000412947 CDY1Q9Y6F8 540 aa13.58□□□□□ -0.24
ZNF3-204ENST00000412947 SCN1AP35498 2009 aa13.57□□□□□ -0.24
ZNF3-204ENST00000412947 OR6C75A6NL08 312 aa13.57□□□□□ -0.24
ZNF3-204ENST00000412947 GOLGA6L19H0YKK7 550 aa13.57□□□□□ -0.24
ZNF3-204ENST00000412947 SRGAP2BP0DMP2 458 aa13.57□□□□□ -0.24
ZNF3-204ENST00000412947 LHX1P48742 406 aa13.57□□□□□ -0.24
ZNF3-204ENST00000412947 ZNF445P59923 1031 aa13.57□□□□□ -0.24
ZNF3-204ENST00000412947 IQCB1Q15051 598 aa13.57□□□□□ -0.24
ZNF3-204ENST00000412947 KRT31Q15323 416 aa13.57□□□□□ -0.24
ZNF3-204ENST00000412947 SKIV2LQ15477 1246 aaKnown RBP13.57□□□□□ -0.24
ZNF3-204ENST00000412947 SOWAHAQ2M3V2 549 aa13.57□□□□□ -0.24
ZNF3-204ENST00000412947 ELMSAN1Q6PJG2 1045 aa13.57□□□□□ -0.24
ZNF3-204ENST00000412947 SCARA5Q6ZMJ2 495 aa13.57□□□□□ -0.24
ZNF3-204ENST00000412947 MAFAQ8NHW3 353 aaPredicted RBP13.57□□□□□ -0.24
ZNF3-204ENST00000412947 FAM200AQ8TCP9 573 aa13.57□□□□□ -0.24
ZNF3-204ENST00000412947 ELMO3Q96BJ8 720 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms