RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 FAM83GA6ND36 823 aa-1□□□□□ -2.57
RNU4-88P-201ENST00000411220 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP-1□□□□□ -2.57
RNU4-88P-201ENST00000411220 KRIT1O00522 736 aa-1□□□□□ -2.57
RNU4-88P-201ENST00000411220 SLC27A2O14975 620 aa-1□□□□□ -2.57
RNU4-88P-201ENST00000411220 SNAI2O43623 268 aa-1□□□□□ -2.57
RNU4-88P-201ENST00000411220 DGKIO75912 1065 aa-1□□□□□ -2.57
RNU4-88P-201ENST00000411220 TOX4O94842 621 aa-1□□□□□ -2.57
RNU4-88P-201ENST00000411220 HTR3BO95264 441 aa-1□□□□□ -2.57
RNU4-88P-201ENST00000411220 PPP1R3DO95685 299 aa-1□□□□□ -2.57
RNU4-88P-201ENST00000411220 ELANEP08246 267 aa-1□□□□□ -2.57
RNU4-88P-201ENST00000411220 RBP3P10745 1247 aa-1□□□□□ -2.57
RNU4-88P-201ENST00000411220 MGMTP16455 207 aa-1□□□□□ -2.57
RNU4-88P-201ENST00000411220 KCNJ4P48050 445 aa-1□□□□□ -2.57
RNU4-88P-201ENST00000411220 NDUFV1P49821 464 aa-1□□□□□ -2.57
RNU4-88P-201ENST00000411220 KLK7P49862 253 aa-1□□□□□ -2.57
RNU4-88P-201ENST00000411220 NDPQ00604 133 aa-1□□□□□ -2.57
RNU4-88P-201ENST00000411220 GHRHRQ02643 423 aa-1□□□□□ -2.57
RNU4-88P-201ENST00000411220 SHBQ15464 509 aa-1□□□□□ -2.57
RNU4-88P-201ENST00000411220 TCTEX1D4Q5JR98 221 aa-1□□□□□ -2.57
RNU4-88P-201ENST00000411220 FAM102AQ5T9C2 384 aaPredicted RBP-1□□□□□ -2.57
RNU4-88P-201ENST00000411220 TTBK2Q6IQ55 1244 aa-1□□□□□ -2.57
RNU4-88P-201ENST00000411220 DOK3Q7L591 496 aa-1□□□□□ -2.57
RNU4-88P-201ENST00000411220 C16orf82Q7Z2V1 217 aa-1□□□□□ -2.57
RNU4-88P-201ENST00000411220 LRRTM1Q86UE6 522 aa-1□□□□□ -2.57
RNU4-88P-201ENST00000411220 NAXDQ8IW45 347 aa-1□□□□□ -2.57
RNU4-88P-201ENST00000411220 ENGASEQ8NFI3 743 aa-1□□□□□ -2.57
RNU4-88P-201ENST00000411220 HERVK_113Q902F9 699 aa-1□□□□□ -2.57
RNU4-88P-201ENST00000411220 TMEM8AQ9HCN3 771 aa-1□□□□□ -2.57
RNU4-88P-201ENST00000411220 CXXC1Q9P0U4 656 aaPredicted RBP-1□□□□□ -2.57
RNU4-88P-201ENST00000411220 COL6A3P12111 3177 aa-1□□□□□ -2.57
RNU4-88P-201ENST00000411220 MAP1AP78559 2803 aaPredicted RBP-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 PRR5-ARHGAP8B1AHC4 643 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 RSPH10B2B2RC85 870 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 DSCR3O14972 297 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 TLR2O60603 784 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 ZNF354AO60765 605 aaPredicted RBP-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 RSPH10BP0C881 870 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 ALDH4A1P30038 563 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 CCNFP41002 786 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 KIR2DS2P43631 304 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 CCT8P50990 548 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 GPM6AP51674 278 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 LUMP51884 338 aaPredicted RBP-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 GTF2A2P52657 109 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 RPS26P62854 115 aaKnown RBP-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 TBX2Q13207 712 aaPredicted RBP-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 SS18Q15532 418 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 PDCD2Q16342 344 aaPredicted RBP-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 FSTL4Q6MZW2 842 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 DRICH1Q6PGQ1 229 aaPredicted RBP-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 BTNL9Q6UXG8 535 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 ARMC9Q7Z3E5 817 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 CHSY1Q86X52 802 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 KIAA0825Q8IV33 1275 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 SFTPA1Q8IWL2 248 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 FAM43AQ8N2R8 423 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 PGBD5Q8N414 524 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 CAMKK1Q8N5S9 505 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 OR10H5Q8NGA6 315 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 WDR48Q8TAF3 677 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 ANKRD24Q8TF21 1146 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 PHF21BQ96EK2 531 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 TUBB6Q9BUF5 446 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 GTPBP2Q9BX10 602 aaKnown RBP-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 C1QTNF4Q9BXJ3 329 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 SEZ6LQ9BYH1 1024 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 ZNF518BQ9C0D4 1074 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 MIR1-1HGQ9H1L0 117 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 NOL6Q9H6R4 1146 aaKnown RBP-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 DONSONQ9NYP3 566 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 PPARGC1AQ9UBK2 798 aaKnown RBP-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 RPH3ALQ9UNE2 315 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 ATP11BQ9Y2G3 1177 aa-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 TIMM13Q9Y5L4 95 aaPredicted RBP-1.01□□□□□ -2.57
RNU4-88P-201ENST00000411220 PCNX2A6NKB5 2137 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 ADM5C9JUS6 153 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 TNRC18O15417 2968 aaPredicted RBP-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 FZD6O60353 706 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 TTLL1O95922 423 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 SYF2O95926 243 aaKnown RBP-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 HRGP04196 525 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 HOXB7P09629 217 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 FLGP20930 4061 aaPredicted RBP-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 GSTT1P30711 240 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 NR0B1P51843 470 aaKnown RBP-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 CXADRP78310 365 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 POU5F1Q01860 360 aaKnown RBP-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 ZNF91Q05481 1191 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 ZFP36L1Q07352 338 aaKnown RBP-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 DBPQ10586 325 aaPredicted RBP-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 TUSC3Q13454 348 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 KIAA0141Q14154 515 aaPredicted RBP-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 SF3B3Q15393 1217 aaKnown RBP-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 PRTGQ2VWP7 1150 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 SLC4A8Q2Y0W8 1093 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 TMEM30BQ3MIR4 351 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 RNF212Q495C1 297 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 KANK2Q63ZY3 851 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 ANKRD13BQ86YJ7 626 aa-1.02□□□□□ -2.57
RNU4-88P-201ENST00000411220 NFAM1Q8NET5 270 aaPredicted RBP-1.02□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms