RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 HK1P19367 917 aa6.2□□□□□ -1.42
LSM5-206ENST00000409987 ZNF135P52742 658 aaPredicted RBP6.2□□□□□ -1.42
LSM5-206ENST00000409987 CHN2P52757 468 aa6.2□□□□□ -1.42
LSM5-206ENST00000409987 RPS16P62249 146 aaKnown RBP6.2□□□□□ -1.42
LSM5-206ENST00000409987 HTRA4P83105 476 aaPredicted RBP6.2□□□□□ -1.42
LSM5-206ENST00000409987 CHAF1AQ13111 956 aaPredicted RBP6.2□□□□□ -1.42
LSM5-206ENST00000409987 SLC13A2Q13183 592 aa6.2□□□□□ -1.42
LSM5-206ENST00000409987 STK3Q13188 491 aa6.2□□□□□ -1.42
LSM5-206ENST00000409987 CTBP1Q13363 440 aa6.2□□□□□ -1.42
LSM5-206ENST00000409987 METTL24Q5JXM2 366 aa6.2□□□□□ -1.42
LSM5-206ENST00000409987 DGKKQ5KSL6 1271 aa6.2□□□□□ -1.42
LSM5-206ENST00000409987 KLHDC7AQ5VTJ3 777 aa6.2□□□□□ -1.42
LSM5-206ENST00000409987 C1QL3Q5VWW1 255 aa6.2□□□□□ -1.42
LSM5-206ENST00000409987 IZUMO3Q5VZ72 239 aa6.2□□□□□ -1.42
LSM5-206ENST00000409987 HIBCHQ6NVY1 386 aaPredicted RBP6.2□□□□□ -1.42
LSM5-206ENST00000409987 MED25Q71SY5 747 aa6.2□□□□□ -1.42
LSM5-206ENST00000409987 LIMS2Q7Z4I7 341 aa6.2□□□□□ -1.42
LSM5-206ENST00000409987 MICU3Q86XE3 530 aa6.2□□□□□ -1.42
LSM5-206ENST00000409987 ZFPM1Q8IX07 1006 aa6.2□□□□□ -1.42
LSM5-206ENST00000409987 AOPEPQ8N6M6 819 aa6.2□□□□□ -1.42
LSM5-206ENST00000409987 ENAHQ8N8S7 591 aaPredicted RBP6.2□□□□□ -1.42
LSM5-206ENST00000409987 MYRIPQ8NFW9 859 aa6.2□□□□□ -1.42
LSM5-206ENST00000409987 TBC1D15Q8TC07 691 aa6.2□□□□□ -1.42
LSM5-206ENST00000409987 SCAMP4Q969E2 229 aa6.2□□□□□ -1.42
LSM5-206ENST00000409987 ZC3H10Q96K80 434 aaKnown RBP6.2□□□□□ -1.42
LSM5-206ENST00000409987 VKORC1Q9BQB6 163 aa6.2□□□□□ -1.42
LSM5-206ENST00000409987 TINAGL1Q9GZM7 467 aaPredicted RBP6.2□□□□□ -1.42
LSM5-206ENST00000409987 CERS4Q9HA82 394 aa6.2□□□□□ -1.42
LSM5-206ENST00000409987 POGKQ9P215 609 aa6.2□□□□□ -1.42
LSM5-206ENST00000409987 FBXO9Q9UK97 447 aaPredicted RBP6.2□□□□□ -1.42
LSM5-206ENST00000409987 PADI4Q9UM07 663 aa6.2□□□□□ -1.42
LSM5-206ENST00000409987 CLCA2Q9UQC9 943 aa6.2□□□□□ -1.42
LSM5-206ENST00000409987 PRICKLE3O43900 615 aaPredicted RBP6.19□□□□□ -1.42
LSM5-206ENST00000409987 TCEA3O75764 348 aa6.19□□□□□ -1.42
LSM5-206ENST00000409987 TRAPPC10P48553 1259 aa6.19□□□□□ -1.42
LSM5-206ENST00000409987 PTTG1IPP53801 180 aa6.19□□□□□ -1.42
LSM5-206ENST00000409987 SLFN5Q08AF3 891 aa6.19□□□□□ -1.42
LSM5-206ENST00000409987 NOMO2Q5JPE7 1267 aa6.19□□□□□ -1.42
LSM5-206ENST00000409987 WDR78Q5VTH9 848 aa6.19□□□□□ -1.42
LSM5-206ENST00000409987 METRNLQ641Q3 311 aa6.19□□□□□ -1.42
LSM5-206ENST00000409987 ERAP2Q6P179 960 aa6.19□□□□□ -1.42
LSM5-206ENST00000409987 POLNQ7Z5Q5 900 aa6.19□□□□□ -1.42
LSM5-206ENST00000409987 PCGF5Q86SE9 256 aa6.19□□□□□ -1.42
LSM5-206ENST00000409987 USP37Q86T82 979 aa6.19□□□□□ -1.42
LSM5-206ENST00000409987 CCDC33Q8N5R6 958 aa6.19□□□□□ -1.42
LSM5-206ENST00000409987 PAF1Q8N7H5 531 aa6.19□□□□□ -1.42
LSM5-206ENST00000409987 SLC17A8Q8NDX2 589 aa6.19□□□□□ -1.42
LSM5-206ENST00000409987 PHACTR3Q96KR7 559 aa6.19□□□□□ -1.42
LSM5-206ENST00000409987 SSBP3Q9BWW4 388 aaPredicted RBP6.19□□□□□ -1.42
LSM5-206ENST00000409987 TRMT13Q9NUP7 481 aaKnown RBP6.19□□□□□ -1.42
LSM5-206ENST00000409987 MRPS18AQ9NVS2 196 aaKnown RBP6.19□□□□□ -1.42
LSM5-206ENST00000409987 SWAP70Q9UH65 585 aa6.19□□□□□ -1.42
LSM5-206ENST00000409987 TMEM233B4DJY2 109 aa6.18□□□□□ -1.42
LSM5-206ENST00000409987 F5H423 210 aaPredicted RBP6.18□□□□□ -1.42
LSM5-206ENST00000409987 M0QYG6 137 aa6.18□□□□□ -1.42
LSM5-206ENST00000409987 THP07101 528 aa6.18□□□□□ -1.42
LSM5-206ENST00000409987 ABCB4P21439 1286 aa6.18□□□□□ -1.42
LSM5-206ENST00000409987 BDNFP23560 247 aa6.18□□□□□ -1.42
LSM5-206ENST00000409987 MGAT1P26572 445 aa6.18□□□□□ -1.42
LSM5-206ENST00000409987 IL6STP40189 918 aaPredicted RBP6.18□□□□□ -1.42
LSM5-206ENST00000409987 SLC11A2P49281 568 aa6.18□□□□□ -1.42
LSM5-206ENST00000409987 RABGGTBP53611 331 aa6.18□□□□□ -1.42
LSM5-206ENST00000409987 SETQ01105 290 aaPredicted RBP6.18□□□□□ -1.42
LSM5-206ENST00000409987 BTKQ06187 659 aa6.18□□□□□ -1.42
LSM5-206ENST00000409987 LMOD3Q0VAK6 560 aa6.18□□□□□ -1.42
LSM5-206ENST00000409987 PMS2P11Q13670 270 aa6.18□□□□□ -1.42
LSM5-206ENST00000409987 DCAF17Q5H9S7 520 aaPredicted RBP6.18□□□□□ -1.42
LSM5-206ENST00000409987 LMBRD2Q68DH5 695 aaPredicted RBP6.18□□□□□ -1.42
LSM5-206ENST00000409987 CIR1Q86X95 450 aaPredicted RBP6.18□□□□□ -1.42
LSM5-206ENST00000409987 DNAJC5GQ8N7S2 189 aa6.18□□□□□ -1.42
LSM5-206ENST00000409987 PDPRQ8NCN5 879 aa6.18□□□□□ -1.42
LSM5-206ENST00000409987 POF1BQ8WVV4 589 aa6.18□□□□□ -1.42
LSM5-206ENST00000409987 ATXN2LQ8WWM7 1075 aaKnown RBP6.18□□□□□ -1.42
LSM5-206ENST00000409987 MIEF2Q96C03 454 aa6.18□□□□□ -1.42
LSM5-206ENST00000409987 NEU1Q99519 415 aa6.18□□□□□ -1.42
LSM5-206ENST00000409987 COLEC11Q9BWP8 271 aa6.18□□□□□ -1.42
LSM5-206ENST00000409987 BRIP1Q9BX63 1249 aa6.18□□□□□ -1.42
LSM5-206ENST00000409987 TLR10Q9BXR5 811 aa6.18□□□□□ -1.42
LSM5-206ENST00000409987 IMPG2Q9BZV3 1241 aa6.18□□□□□ -1.42
LSM5-206ENST00000409987 ZNF518BQ9C0D4 1074 aa6.18□□□□□ -1.42
LSM5-206ENST00000409987 WDR12Q9GZL7 423 aaKnown RBP6.18□□□□□ -1.42
LSM5-206ENST00000409987 VPS11Q9H270 941 aa6.18□□□□□ -1.42
LSM5-206ENST00000409987 PLEKHM1Q9Y4G2 1056 aa6.18□□□□□ -1.42
LSM5-206ENST00000409987 A0A087WWL8 130 aa6.17□□□□□ -1.42
LSM5-206ENST00000409987 A0A1W2PPC4 97 aa6.17□□□□□ -1.42
LSM5-206ENST00000409987 KLRG2A4D1S0 409 aaPredicted RBP6.17□□□□□ -1.42
LSM5-206ENST00000409987 APOL1O14791 398 aa6.17□□□□□ -1.42
LSM5-206ENST00000409987 FGF18O76093 207 aa6.17□□□□□ -1.42
LSM5-206ENST00000409987 KIF20AO95235 890 aa6.17□□□□□ -1.42
LSM5-206ENST00000409987 CHEK2O96017 543 aa6.17□□□□□ -1.42
LSM5-206ENST00000409987 GRPP07492 148 aa6.17□□□□□ -1.42
LSM5-206ENST00000409987 PIM1P11309 404 aaPredicted RBP6.17□□□□□ -1.42
LSM5-206ENST00000409987 HARSP12081 509 aaKnown RBP6.17□□□□□ -1.42
LSM5-206ENST00000409987 FCER1AP12319 257 aa6.17□□□□□ -1.42
LSM5-206ENST00000409987 GCSHP23434 173 aa6.17□□□□□ -1.42
LSM5-206ENST00000409987 PPM1AP35813 382 aa6.17□□□□□ -1.42
LSM5-206ENST00000409987 UCP3P55916 312 aa6.17□□□□□ -1.42
LSM5-206ENST00000409987 TCF15Q12870 199 aa6.17□□□□□ -1.42
LSM5-206ENST00000409987 RAB32Q13637 225 aa6.17□□□□□ -1.42
LSM5-206ENST00000409987 KRT72Q14CN4 511 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms