RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 PDXDC1Q6P996 788 aa22.11■■□□□ 1.13
C4orf48-202ENST00000409860 TRIM65Q6PJ69 517 aa22.11■■□□□ 1.13
C4orf48-202ENST00000409860 SCARA5Q6ZMJ2 495 aa22.11■■□□□ 1.13
C4orf48-202ENST00000409860 DPH6Q7L8W6 267 aa22.11■■□□□ 1.13
C4orf48-202ENST00000409860 TAS1R1Q7RTX1 841 aa22.11■■□□□ 1.13
C4orf48-202ENST00000409860 TMC7Q7Z402 723 aa22.11■■□□□ 1.13
C4orf48-202ENST00000409860 TMEM86AQ8N2M4 240 aa22.11■■□□□ 1.13
C4orf48-202ENST00000409860 ELMO3Q96BJ8 720 aa22.11■■□□□ 1.13
C4orf48-202ENST00000409860 TTYH1Q9H313 450 aaPredicted RBP22.11■■□□□ 1.13
C4orf48-202ENST00000409860 ENTPD7Q9NQZ7 604 aa22.11■■□□□ 1.13
C4orf48-202ENST00000409860 CHST7Q9NS84 486 aa22.11■■□□□ 1.13
C4orf48-202ENST00000409860 L1RE1Q9UN81 338 aa22.11■■□□□ 1.13
C4orf48-202ENST00000409860 SSX2IPQ9Y2D8 614 aa22.11■■□□□ 1.13
C4orf48-202ENST00000409860 NLRC5Q86WI3 1866 aa22.11■■□□□ 1.13
C4orf48-202ENST00000409860 CBFA2T2O43439 604 aa22.1■■□□□ 1.13
C4orf48-202ENST00000409860 CYP11A1P05108 521 aa22.1■■□□□ 1.13
C4orf48-202ENST00000409860 CTSAP10619 480 aa22.1■■□□□ 1.13
C4orf48-202ENST00000409860 SLC9A1P19634 815 aa22.1■■□□□ 1.13
C4orf48-202ENST00000409860 PON1P27169 355 aa22.1■■□□□ 1.13
C4orf48-202ENST00000409860 PLCB2Q00722 1185 aa22.1■■□□□ 1.13
C4orf48-202ENST00000409860 DSG1Q02413 1049 aa22.1■■□□□ 1.13
C4orf48-202ENST00000409860 YWHAHQ04917 246 aaPredicted RBP22.1■■□□□ 1.13
C4orf48-202ENST00000409860 PTPROQ16827 1216 aa22.1■■□□□ 1.13
C4orf48-202ENST00000409860 RTP2Q5QGT7 225 aa22.1■■□□□ 1.13
C4orf48-202ENST00000409860 WSCD1Q658N2 575 aa22.1■■□□□ 1.13
C4orf48-202ENST00000409860 ADGRF2Q8IZF7 708 aa22.1■■□□□ 1.13
C4orf48-202ENST00000409860 PDCL2Q8N4E4 241 aa22.1■■□□□ 1.13
C4orf48-202ENST00000409860 SPATA18Q8TC71 538 aa22.1■■□□□ 1.13
C4orf48-202ENST00000409860 RIN2Q8WYP3 895 aaPredicted RBP22.1■■□□□ 1.13
C4orf48-202ENST00000409860 B3GALT6Q96L58 329 aa22.1■■□□□ 1.13
C4orf48-202ENST00000409860 NAP1L5Q96NT1 182 aaPredicted RBP22.1■■□□□ 1.13
C4orf48-202ENST00000409860 TCF25Q9BQ70 676 aa22.1■■□□□ 1.13
C4orf48-202ENST00000409860 CYP3A43Q9HB55 503 aa22.1■■□□□ 1.13
C4orf48-202ENST00000409860 NGRNQ9NPE2 291 aaKnown RBP22.1■■□□□ 1.13
C4orf48-202ENST00000409860 MRPL17Q9NRX2 175 aaKnown RBP22.1■■□□□ 1.13
C4orf48-202ENST00000409860 IFNKQ9P0W0 207 aa22.1■■□□□ 1.13
C4orf48-202ENST00000409860 TIMM13Q9Y5L4 95 aaPredicted RBP22.1■■□□□ 1.13
C4orf48-202ENST00000409860 SCN1AP35498 2009 aa22.09■■□□□ 1.13
C4orf48-202ENST00000409860 H7C4K7 107 aa22.09■■□□□ 1.13
C4orf48-202ENST00000409860 LPXNO60711 386 aa22.09■■□□□ 1.13
C4orf48-202ENST00000409860 FAM163BP0C2L3 166 aa22.09■■□□□ 1.13
C4orf48-202ENST00000409860 TBXAS1P24557 533 aaPredicted RBP22.09■■□□□ 1.13
C4orf48-202ENST00000409860 CA8P35219 290 aa22.09■■□□□ 1.13
C4orf48-202ENST00000409860 ASPAP45381 313 aa22.09■■□□□ 1.13
C4orf48-202ENST00000409860 SMC1AQ14683 1233 aaKnown RBP22.09■■□□□ 1.13
C4orf48-202ENST00000409860 SOWAHAQ2M3V2 549 aa22.09■■□□□ 1.13
C4orf48-202ENST00000409860 UVSSAQ2YD98 709 aa22.09■■□□□ 1.13
C4orf48-202ENST00000409860 VARS2Q5ST30 1063 aaKnown RBP22.09■■□□□ 1.13
C4orf48-202ENST00000409860 OVOS1Q6IE37 1185 aa22.09■■□□□ 1.13
C4orf48-202ENST00000409860 PDE12Q6L8Q7 609 aaKnown RBP22.09■■□□□ 1.13
C4orf48-202ENST00000409860 ZNF280DQ6N043 979 aa22.09■■□□□ 1.13
C4orf48-202ENST00000409860 GPR153Q6NV75 609 aa22.09■■□□□ 1.13
C4orf48-202ENST00000409860 ANKS3Q6ZW76 656 aa22.09■■□□□ 1.13
C4orf48-202ENST00000409860 GPR65Q8IYL9 337 aa22.09■■□□□ 1.13
C4orf48-202ENST00000409860 MICAL1Q8TDZ2 1067 aa22.09■■□□□ 1.13
C4orf48-202ENST00000409860 PIK3R5Q8WYR1 880 aa22.09■■□□□ 1.13
C4orf48-202ENST00000409860 TATDN2Q93075 761 aa22.09■■□□□ 1.13
C4orf48-202ENST00000409860 FAM81BQ96LP2 452 aa22.09■■□□□ 1.13
C4orf48-202ENST00000409860 PCMTD1Q96MG8 357 aaPredicted RBP22.09■■□□□ 1.13
C4orf48-202ENST00000409860 ERGIC2Q96RQ1 377 aa22.09■■□□□ 1.13
C4orf48-202ENST00000409860 LSM14BQ9BX40 385 aaKnown RBP22.09■■□□□ 1.13
C4orf48-202ENST00000409860 SMYD3Q9H7B4 428 aa22.09■■□□□ 1.13
C4orf48-202ENST00000409860 RFXAPO00287 272 aa22.08■■□□□ 1.13
C4orf48-202ENST00000409860 C2CD2LO14523 706 aa22.08■■□□□ 1.13
C4orf48-202ENST00000409860 FSCN2O14926 492 aa22.08■■□□□ 1.13
C4orf48-202ENST00000409860 TEX33O43247 280 aa22.08■■□□□ 1.13
C4orf48-202ENST00000409860 TACC1O75410 805 aa22.08■■□□□ 1.13
C4orf48-202ENST00000409860 CSPG5O95196 566 aa22.08■■□□□ 1.13
C4orf48-202ENST00000409860 DNAJB1P25685 340 aa22.08■■□□□ 1.13
C4orf48-202ENST00000409860 CREMQ03060 361 aa22.08■■□□□ 1.13
C4orf48-202ENST00000409860 KCNMA1Q12791 1236 aa22.08■■□□□ 1.13
C4orf48-202ENST00000409860 CUL2Q13617 745 aa22.08■■□□□ 1.13
C4orf48-202ENST00000409860 NR1I3Q14994 352 aa22.08■■□□□ 1.13
C4orf48-202ENST00000409860 SYCP1Q15431 976 aa22.08■■□□□ 1.13
C4orf48-202ENST00000409860 KIAA0319Q5VV43 1072 aa22.08■■□□□ 1.13
C4orf48-202ENST00000409860 PLPP4Q5VZY2 271 aa22.08■■□□□ 1.13
C4orf48-202ENST00000409860 LIMS2Q7Z4I7 341 aa22.08■■□□□ 1.13
C4orf48-202ENST00000409860 PPM1KQ8N3J5 372 aa22.08■■□□□ 1.13
C4orf48-202ENST00000409860 BCO2Q9BYV7 579 aa22.08■■□□□ 1.13
C4orf48-202ENST00000409860 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.08■■□□□ 1.131e-6■■■□□ 15.3
C4orf48-202ENST00000409860 APEX2Q9UBZ4 518 aa22.08■■□□□ 1.13
C4orf48-202ENST00000409860 LAMA3Q16787 3333 aa22.07■■□□□ 1.12
C4orf48-202ENST00000409860 OAZ2O95190 189 aa22.07■■□□□ 1.12
C4orf48-202ENST00000409860 WARSP23381 471 aaKnown RBP22.07■■□□□ 1.12
C4orf48-202ENST00000409860 LHX1P48742 406 aa22.07■■□□□ 1.12
C4orf48-202ENST00000409860 ERVFC1P60507 584 aa22.07■■□□□ 1.12
C4orf48-202ENST00000409860 YWHAEP62258 255 aaKnown RBP22.07■■□□□ 1.12
C4orf48-202ENST00000409860 GCNT1Q02742 428 aa22.07■■□□□ 1.12
C4orf48-202ENST00000409860 PTPN14Q15678 1187 aa22.07■■□□□ 1.12
C4orf48-202ENST00000409860 PSMD5Q16401 504 aa22.07■■□□□ 1.12
C4orf48-202ENST00000409860 SARM1Q6SZW1 724 aa22.07■■□□□ 1.12
C4orf48-202ENST00000409860 THEM5Q8N1Q8 247 aa22.07■■□□□ 1.12
C4orf48-202ENST00000409860 TTC39CQ8N584 583 aa22.07■■□□□ 1.12
C4orf48-202ENST00000409860 OXCT2Q9BYC2 517 aaPredicted RBP22.07■■□□□ 1.12
C4orf48-202ENST00000409860 SNX25Q9H3E2 840 aa22.07■■□□□ 1.12
C4orf48-202ENST00000409860 PRDM12Q9H4Q4 367 aa22.07■■□□□ 1.12
C4orf48-202ENST00000409860 PLCB1Q9NQ66 1216 aa22.07■■□□□ 1.12
C4orf48-202ENST00000409860 SIK3Q9Y2K2 1263 aa22.07■■□□□ 1.12
C4orf48-202ENST00000409860 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.06■■□□□ 1.12
C4orf48-202ENST00000409860 A0A1W2PQC6 194 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms