RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 FAM189A1O60320 539 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 PHACTR2O75167 634 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 IL18RAPO95256 599 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 C22orf31O95567 290 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 LGALS2P05162 132 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 CLTAP09496 248 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 HOXD8P13378 290 aaPredicted RBP8.01□□□□□ -1.13
CXCR4-202ENST00000409817 KRT5P13647 590 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 TMOD1P28289 359 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 PHKA2P46019 1235 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 TNFAIP2Q03169 654 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 CUL2Q13617 745 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 GRB14Q14449 540 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 SMC1AQ14683 1233 aaKnown RBP8.01□□□□□ -1.13
CXCR4-202ENST00000409817 DUOXA2Q1HG44 320 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 CLEC16AQ2KHT3 1053 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 MAP1SQ66K74 1059 aaPredicted RBP8.01□□□□□ -1.13
CXCR4-202ENST00000409817 EFCAB12Q6NXP0 572 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 PALB2Q86YC2 1186 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 RHPN2Q8IUC4 686 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 ZNF295-AS1Q8N0V1 137 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 ARHGEF26Q96DR7 871 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 MS4A14Q96JA4 679 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 VCPIP1Q96JH7 1222 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 ZBTB45Q96K62 511 aaPredicted RBP8.01□□□□□ -1.13
CXCR4-202ENST00000409817 PCDHB18PQ96TA0 734 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 C2orf49Q9BVC5 232 aaPredicted RBP8.01□□□□□ -1.13
CXCR4-202ENST00000409817 KLF16Q9BXK1 252 aaPredicted RBP8.01□□□□□ -1.13
CXCR4-202ENST00000409817 HAPLN2Q9GZV7 340 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 WNT8AQ9H1J5 351 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 ABHD16BQ9H3Z7 469 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 SLITRK6Q9H5Y7 841 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 ZNF408Q9H9D4 720 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 PTPRHQ9HD43 1115 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 OSGEPQ9NPF4 335 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 MED4Q9NPJ6 270 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 TAS2R14Q9NYV8 317 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 KIAA1522Q9P206 1035 aaPredicted RBP8.01□□□□□ -1.13
CXCR4-202ENST00000409817 LCMT1Q9UIC8 334 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 CPSF3Q9UKF6 684 aaKnown RBP8.01□□□□□ -1.13
CXCR4-202ENST00000409817 PACSIN2Q9UNF0 486 aaPredicted RBP8.01□□□□□ -1.13
CXCR4-202ENST00000409817 TNFSF13BQ9Y275 285 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 ZNF236Q9UL36 1845 aa8.01□□□□□ -1.13
CXCR4-202ENST00000409817 GOLGA6L10A0A0M3HER8 536 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 CCDC66A2RUB6 948 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 SLC15A5A6NIM6 579 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 ABLIM1O14639 778 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 B4GALT4O60513 344 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 VNN1O95497 513 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 ASS1P00966 412 aaKnown RBP8□□□□□ -1.13
CXCR4-202ENST00000409817 MMEP08473 750 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 HOXC6P09630 235 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 SRGAP2CP0DJJ0 459 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 ZNF16P17020 682 aaPredicted RBP8□□□□□ -1.13
CXCR4-202ENST00000409817 YWHAEP62258 255 aaKnown RBP8□□□□□ -1.13
CXCR4-202ENST00000409817 NOP14P78316 857 aaKnown RBP8□□□□□ -1.13
CXCR4-202ENST00000409817 CDC42EP1Q00587 391 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 PAK2Q13177 524 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 DRP2Q13474 957 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 SGSM1Q2NKQ1 1148 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 HSP90B2PQ58FF3 399 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 ATF7IP2Q5U623 682 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 IQSEC1Q6DN90 963 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 MAATS1Q7Z4T9 603 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 GPR142Q7Z601 462 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 PLEKHH3Q7Z736 793 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 DPP9Q86TI2 863 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 LRRC71Q8N4P6 559 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 LINC01465Q8N7H1 131 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 CCDC26Q8TAB7 109 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 AENQ8WTP8 325 aaKnown RBP8□□□□□ -1.13
CXCR4-202ENST00000409817 PKNOX2Q96KN3 472 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 PLVAPQ9BX97 442 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 KATNBL1Q9H079 304 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 FAM124BQ9H5Z6 455 aaPredicted RBP8□□□□□ -1.13
CXCR4-202ENST00000409817 GDF3Q9NR23 364 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 PDGFCQ9NRA1 345 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 NOC2LQ9Y3T9 749 aaKnown RBP8□□□□□ -1.13
CXCR4-202ENST00000409817 ALG6Q9Y672 507 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 INO80B-WBP1J3KQ70 363 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 DDX3YO15523 660 aaKnown RBP8□□□□□ -1.13
CXCR4-202ENST00000409817 ZEB2O60315 1214 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 CYP1A1P04798 512 aaPredicted RBP8□□□□□ -1.13
CXCR4-202ENST00000409817 EDN1P05305 212 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 UNGP13051 313 aaPredicted RBP8□□□□□ -1.13
CXCR4-202ENST00000409817 INSRRP14616 1297 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 ACO1P21399 889 aaKnown RBP8□□□□□ -1.13
CXCR4-202ENST00000409817 AARSP49588 968 aaKnown RBP eCLIP8□□□□□ -1.13
CXCR4-202ENST00000409817 CENPCQ03188 943 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 CBLBQ13191 982 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 CUL1Q13616 776 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 ZNF568Q3ZCX4 644 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 DUSP28Q4G0W2 176 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 TAF3Q5VWG9 929 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 ZNF564Q8TBZ8 553 aaPredicted RBP8□□□□□ -1.13
CXCR4-202ENST00000409817 COPS5Q92905 334 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 CAVIN3Q969G5 261 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 ZNF653Q96CK0 615 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 MAML3Q96JK9 1138 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 PI4K2AQ9BTU6 479 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms