RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 GIT1Q9Y2X7 761 aa13.3□□□□□ -0.28
CHMP3-204ENST00000409727 DCDC2CA8MYV0 355 aa13.29□□□□□ -0.28
CHMP3-204ENST00000409727 THP07101 528 aa13.29□□□□□ -0.28
CHMP3-204ENST00000409727 CD19P15391 556 aa13.29□□□□□ -0.28
CHMP3-204ENST00000409727 NOP2P46087 812 aaKnown RBP13.29□□□□□ -0.28
CHMP3-204ENST00000409727 ZNF132P52740 706 aa13.29□□□□□ -0.28
CHMP3-204ENST00000409727 TLE2Q04725 743 aa13.29□□□□□ -0.28
CHMP3-204ENST00000409727 PKN2Q16513 984 aaKnown RBP13.29□□□□□ -0.28
CHMP3-204ENST00000409727 DPH6Q7L8W6 267 aa13.29□□□□□ -0.28
CHMP3-204ENST00000409727 MRPL10Q7Z7H8 261 aaKnown RBP13.29□□□□□ -0.28
CHMP3-204ENST00000409727 ECHDC2Q86YB7 292 aa13.29□□□□□ -0.28
CHMP3-204ENST00000409727 LINC01599Q8WXQ3 324 aa13.29□□□□□ -0.28
CHMP3-204ENST00000409727 CPA5Q8WXQ8 436 aa13.29□□□□□ -0.28
CHMP3-204ENST00000409727 TWNKQ96RR1 684 aa13.29□□□□□ -0.28
CHMP3-204ENST00000409727 HIPK3Q9H422 1215 aa13.29□□□□□ -0.28
CHMP3-204ENST00000409727 CHORDC1Q9UHD1 332 aaPredicted RBP13.29□□□□□ -0.28
CHMP3-204ENST00000409727 SCN1AP35498 2009 aa13.29□□□□□ -0.28
CHMP3-204ENST00000409727 PDCD11Q14690 1871 aaKnown RBP13.29□□□□□ -0.28
CHMP3-204ENST00000409727 ANO9A1A5B4 782 aa13.29□□□□□ -0.28
CHMP3-204ENST00000409727 CASTOR2A6NHX0 329 aa13.29□□□□□ -0.28
CHMP3-204ENST00000409727 PIRO00625 290 aa13.29□□□□□ -0.28
CHMP3-204ENST00000409727 ENC1O14682 589 aa13.29□□□□□ -0.28
CHMP3-204ENST00000409727 SPTLC1O15269 473 aa13.29□□□□□ -0.28
CHMP3-204ENST00000409727 ZNF623O75123 536 aa13.29□□□□□ -0.28
CHMP3-204ENST00000409727 URI1O94763 535 aaPredicted RBP13.29□□□□□ -0.28
CHMP3-204ENST00000409727 TUBB4AP04350 444 aa13.29□□□□□ -0.28
CHMP3-204ENST00000409727 IGFBP6P24592 240 aaPredicted RBP13.29□□□□□ -0.28
CHMP3-204ENST00000409727 GJA8P48165 433 aa13.29□□□□□ -0.28
CHMP3-204ENST00000409727 FAAP100Q0VG06 881 aa13.29□□□□□ -0.28
CHMP3-204ENST00000409727 LRRC52Q8N7C0 313 aa13.29□□□□□ -0.28
CHMP3-204ENST00000409727 CTNNBL1Q8WYA6 563 aaPredicted RBP13.29□□□□□ -0.28
CHMP3-204ENST00000409727 PGBD4Q96DM1 585 aa13.29□□□□□ -0.28
CHMP3-204ENST00000409727 NOX5Q96PH1 765 aa13.29□□□□□ -0.28
CHMP3-204ENST00000409727 MRPL45Q9BRJ2 306 aaKnown RBP13.29□□□□□ -0.28
CHMP3-204ENST00000409727 TRAIPQ9BWF2 469 aa13.29□□□□□ -0.28
CHMP3-204ENST00000409727 RGS18Q9NS28 235 aa13.29□□□□□ -0.28
CHMP3-204ENST00000409727 CTAGE9A4FU28 777 aa13.28□□□□□ -0.28
CHMP3-204ENST00000409727 PITPNM1O00562 1244 aa13.28□□□□□ -0.28
CHMP3-204ENST00000409727 ATMINO43313 823 aaPredicted RBP13.28□□□□□ -0.28
CHMP3-204ENST00000409727 RTN2O75298 545 aa13.28□□□□□ -0.28
CHMP3-204ENST00000409727 SKIP12755 728 aa13.28□□□□□ -0.28
CHMP3-204ENST00000409727 CYP3A5P20815 502 aa13.28□□□□□ -0.28
CHMP3-204ENST00000409727 CYP2C18P33260 490 aa13.28□□□□□ -0.28
CHMP3-204ENST00000409727 RAD23BP54727 409 aa13.28□□□□□ -0.28
CHMP3-204ENST00000409727 GPNMBQ14956 572 aa13.28□□□□□ -0.28
CHMP3-204ENST00000409727 CLEC16AQ2KHT3 1053 aa13.28□□□□□ -0.28
CHMP3-204ENST00000409727 NAA35Q5VZE5 725 aa13.28□□□□□ -0.28
CHMP3-204ENST00000409727 ANKRD33Q7Z3H0 272 aa13.28□□□□□ -0.28
CHMP3-204ENST00000409727 DBF4BQ8NFT6 615 aa13.28□□□□□ -0.28
CHMP3-204ENST00000409727 ZNF606Q8WXB4 792 aa13.28□□□□□ -0.28
CHMP3-204ENST00000409727 TFAP2BQ92481 460 aa13.28□□□□□ -0.28
CHMP3-204ENST00000409727 ARHGEF26Q96DR7 871 aa13.28□□□□□ -0.28
CHMP3-204ENST00000409727 CYFIP2Q96F07 1278 aa13.28□□□□□ -0.28
CHMP3-204ENST00000409727 PAWRQ96IZ0 340 aaKnown RBP13.28□□□□□ -0.28
CHMP3-204ENST00000409727 ZNF560Q96MR9 790 aa13.28□□□□□ -0.28
CHMP3-204ENST00000409727 ZSWIM1Q9BR11 485 aa13.28□□□□□ -0.28
CHMP3-204ENST00000409727 ELOVL4Q9GZR5 314 aa13.28□□□□□ -0.28
CHMP3-204ENST00000409727 CYP3A43Q9HB55 503 aa13.28□□□□□ -0.28
CHMP3-204ENST00000409727 SLC38A7Q9NVC3 462 aa13.28□□□□□ -0.28
CHMP3-204ENST00000409727 PCDH10Q9P2E7 1040 aa13.28□□□□□ -0.28
CHMP3-204ENST00000409727 MYO1AQ9UBC5 1043 aa13.28□□□□□ -0.28
CHMP3-204ENST00000409727 KPNA7A9QM74 516 aa13.27□□□□□ -0.28
CHMP3-204ENST00000409727 C9IYK1 514 aa13.27□□□□□ -0.28
CHMP3-204ENST00000409727 CILPO75339 1184 aa13.27□□□□□ -0.28
CHMP3-204ENST00000409727 TACC1O75410 805 aa13.27□□□□□ -0.28
CHMP3-204ENST00000409727 STAU1O95793 577 aaKnown RBP13.27□□□□□ -0.28
CHMP3-204ENST00000409727 FGFR1P11362 822 aa13.27□□□□□ -0.28
CHMP3-204ENST00000409727 TAF6P49848 677 aa13.27□□□□□ -0.28
CHMP3-204ENST00000409727 CLCNKBP51801 687 aa13.27□□□□□ -0.28
CHMP3-204ENST00000409727 NDST1P52848 882 aa13.27□□□□□ -0.28
CHMP3-204ENST00000409727 PTPROQ16827 1216 aa13.27□□□□□ -0.28
CHMP3-204ENST00000409727 C2CD6Q53TS8 623 aa13.27□□□□□ -0.28
CHMP3-204ENST00000409727 SLC24A5Q71RS6 500 aa13.27□□□□□ -0.28
CHMP3-204ENST00000409727 DEFB128Q7Z7B8 93 aa13.27□□□□□ -0.28
CHMP3-204ENST00000409727 PHLDB2Q86SQ0 1253 aa13.27□□□□□ -0.28
CHMP3-204ENST00000409727 ZNF677Q86XU0 584 aa13.27□□□□□ -0.28
CHMP3-204ENST00000409727 WHAMMQ8TF30 809 aa13.27□□□□□ -0.28
CHMP3-204ENST00000409727 HEXIM2Q96MH2 286 aaKnown RBP13.27□□□□□ -0.28
CHMP3-204ENST00000409727 ALS2CR12Q96Q35 445 aa13.27□□□□□ -0.28
CHMP3-204ENST00000409727 TSPAN18Q96SJ8 248 aa13.27□□□□□ -0.28
CHMP3-204ENST00000409727 NAPGQ99747 312 aaPredicted RBP13.27□□□□□ -0.28
CHMP3-204ENST00000409727 PAAF1Q9BRP4 392 aa13.27□□□□□ -0.28
CHMP3-204ENST00000409727 TSPYL2Q9H2G4 693 aaPredicted RBP13.27□□□□□ -0.28
CHMP3-204ENST00000409727 OSGEPQ9NPF4 335 aa13.27□□□□□ -0.28
CHMP3-204ENST00000409727 SSUH2Q9Y2M2 353 aa13.27□□□□□ -0.28
CHMP3-204ENST00000409727 ANKRD62A6NC57 917 aa13.27□□□□□ -0.29
CHMP3-204ENST00000409727 SPDYE4A6NLX3 237 aa13.27□□□□□ -0.29
CHMP3-204ENST00000409727 HCRTO43612 131 aa13.27□□□□□ -0.29
CHMP3-204ENST00000409727 PALMO75781 387 aa13.27□□□□□ -0.29
CHMP3-204ENST00000409727 TMEM253P0C7T8 217 aa13.27□□□□□ -0.29
CHMP3-204ENST00000409727 COL6A1P12109 1028 aa13.27□□□□□ -0.29
CHMP3-204ENST00000409727 LILRA4P59901 499 aa13.27□□□□□ -0.29
CHMP3-204ENST00000409727 SOWAHAQ2M3V2 549 aa13.27□□□□□ -0.29
CHMP3-204ENST00000409727 SV2CQ496J9 727 aa13.27□□□□□ -0.29
CHMP3-204ENST00000409727 PAN2Q504Q3 1202 aaKnown RBP13.27□□□□□ -0.29
CHMP3-204ENST00000409727 ACAD10Q6JQN1 1059 aa13.27□□□□□ -0.29
CHMP3-204ENST00000409727 SLC4A11Q8NBS3 891 aa13.27□□□□□ -0.29
CHMP3-204ENST00000409727 TRIM58Q8NG06 486 aa13.27□□□□□ -0.29
CHMP3-204ENST00000409727 OR6B3Q8NGW1 331 aa13.27□□□□□ -0.29
CHMP3-204ENST00000409727 TMEM176AQ96HP8 235 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms