RNA–Protein interactions for RNA: ENST00000409712.5

SUMO1-209, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 2 BASIC

Gene SUMO1, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-209ENST00000409712 TRIM65Q6PJ69 517 aa17.83■□□□□ 0.44
SUMO1-209ENST00000409712 TAS1R1Q7RTX1 841 aa17.83■□□□□ 0.44
SUMO1-209ENST00000409712 VPS52Q8N1B4 723 aa17.83■□□□□ 0.44
SUMO1-209ENST00000409712 APPL2Q8NEU8 664 aa17.83■□□□□ 0.44
SUMO1-209ENST00000409712 SPATA18Q8TC71 538 aa17.83■□□□□ 0.44
SUMO1-209ENST00000409712 GDPD5Q8WTR4 605 aa17.83■□□□□ 0.44
SUMO1-209ENST00000409712 NT5C1BQ96P26 610 aa17.83■□□□□ 0.44
SUMO1-209ENST00000409712 CRACR2AQ9BSW2 395 aa17.83■□□□□ 0.44
SUMO1-209ENST00000409712 TTPALQ9BTX7 342 aa17.83■□□□□ 0.44
SUMO1-209ENST00000409712 NIF3L1Q9GZT8 377 aa17.83■□□□□ 0.44
SUMO1-209ENST00000409712 RTN4Q9NQC3 1192 aaKnown RBP17.83■□□□□ 0.44
SUMO1-209ENST00000409712 TLR9Q9NR96 1032 aa17.83■□□□□ 0.44
SUMO1-209ENST00000409712 NXF1Q9UBU9 619 aaKnown RBP17.83■□□□□ 0.44
SUMO1-209ENST00000409712 URODP06132 367 aa17.82■□□□□ 0.44
SUMO1-209ENST00000409712 FAM163BP0C2L3 166 aa17.82■□□□□ 0.44
SUMO1-209ENST00000409712 PON1P27169 355 aa17.82■□□□□ 0.44
SUMO1-209ENST00000409712 ASPAP45381 313 aa17.82■□□□□ 0.44
SUMO1-209ENST00000409712 UBXN1Q04323 297 aa17.82■□□□□ 0.44
SUMO1-209ENST00000409712 KCNMA1Q12791 1236 aa17.82■□□□□ 0.44
SUMO1-209ENST00000409712 SOWAHAQ2M3V2 549 aa17.82■□□□□ 0.44
SUMO1-209ENST00000409712 RTP2Q5QGT7 225 aa17.82■□□□□ 0.44
SUMO1-209ENST00000409712 PDE12Q6L8Q7 609 aaKnown RBP17.82■□□□□ 0.44
SUMO1-209ENST00000409712 PDXDC1Q6P996 788 aa17.82■□□□□ 0.44
SUMO1-209ENST00000409712 TMEM86AQ8N2M4 240 aa17.82■□□□□ 0.44
SUMO1-209ENST00000409712 PIK3R5Q8WYR1 880 aa17.82■□□□□ 0.44
SUMO1-209ENST00000409712 ELMO3Q96BJ8 720 aa17.82■□□□□ 0.44
SUMO1-209ENST00000409712 NAP1L5Q96NT1 182 aaPredicted RBP17.82■□□□□ 0.44
SUMO1-209ENST00000409712 ERGIC2Q96RQ1 377 aa17.82■□□□□ 0.44
SUMO1-209ENST00000409712 BCO2Q9BYV7 579 aa17.82■□□□□ 0.44
SUMO1-209ENST00000409712 L1RE1Q9UN81 338 aa17.82■□□□□ 0.44
SUMO1-209ENST00000409712 POLIQ9UNA4 740 aa17.82■□□□□ 0.44
SUMO1-209ENST00000409712 SSX2IPQ9Y2D8 614 aa17.82■□□□□ 0.44
SUMO1-209ENST00000409712 FSCN2O14926 492 aa17.81■□□□□ 0.44
SUMO1-209ENST00000409712 LPXNO60711 386 aa17.81■□□□□ 0.44
SUMO1-209ENST00000409712 TACC1O75410 805 aa17.81■□□□□ 0.44
SUMO1-209ENST00000409712 SLC9A1P19634 815 aa17.81■□□□□ 0.44
SUMO1-209ENST00000409712 UBASH3AP57075 661 aa17.81■□□□□ 0.44
SUMO1-209ENST00000409712 ERVFC1P60507 584 aa17.81■□□□□ 0.44
SUMO1-209ENST00000409712 CAMK1Q14012 370 aa17.81■□□□□ 0.44
SUMO1-209ENST00000409712 MRPL58Q14197 206 aaKnown RBP17.81■□□□□ 0.44
SUMO1-209ENST00000409712 BMS1Q14692 1282 aaKnown RBP17.81■□□□□ 0.44
SUMO1-209ENST00000409712 NR1I3Q14994 352 aa17.81■□□□□ 0.44
SUMO1-209ENST00000409712 VARS2Q5ST30 1063 aaKnown RBP17.81■□□□□ 0.44
SUMO1-209ENST00000409712 KIAA0319Q5VV43 1072 aa17.81■□□□□ 0.44
SUMO1-209ENST00000409712 KIAA1841Q6NSI8 718 aa17.81■□□□□ 0.44
SUMO1-209ENST00000409712 CEP57Q86XR8 500 aa17.81■□□□□ 0.44
SUMO1-209ENST00000409712 ADGRF2Q8IZF7 708 aa17.81■□□□□ 0.44
SUMO1-209ENST00000409712 PDCL2Q8N4E4 241 aa17.81■□□□□ 0.44
SUMO1-209ENST00000409712 TATDN2Q93075 761 aa17.81■□□□□ 0.44
SUMO1-209ENST00000409712 B3GALT6Q96L58 329 aa17.81■□□□□ 0.44
SUMO1-209ENST00000409712 MMS19Q96T76 1030 aa17.81■□□□□ 0.44
SUMO1-209ENST00000409712 TCF25Q9BQ70 676 aa17.81■□□□□ 0.44
SUMO1-209ENST00000409712 FAM124BQ9H5Z6 455 aaPredicted RBP17.81■□□□□ 0.44
SUMO1-209ENST00000409712 CYP3A43Q9HB55 503 aa17.81■□□□□ 0.44
SUMO1-209ENST00000409712 NGRNQ9NPE2 291 aaKnown RBP17.81■□□□□ 0.44
SUMO1-209ENST00000409712 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.81■□□□□ 0.445e-8■■■■■ 101.2
SUMO1-209ENST00000409712 IRAK3Q9Y616 596 aa17.81■□□□□ 0.44
SUMO1-209ENST00000409712 LAMA3Q16787 3333 aa17.8■□□□□ 0.44
SUMO1-209ENST00000409712 OAZ2O95190 189 aa17.8■□□□□ 0.44
SUMO1-209ENST00000409712 WARSP23381 471 aaKnown RBP17.8■□□□□ 0.44
SUMO1-209ENST00000409712 TBXAS1P24557 533 aaPredicted RBP17.8■□□□□ 0.44
SUMO1-209ENST00000409712 GCNT1Q02742 428 aa17.8■□□□□ 0.44
SUMO1-209ENST00000409712 YWHAHQ04917 246 aaPredicted RBP17.8■□□□□ 0.44
SUMO1-209ENST00000409712 LRMPQ12912 555 aa17.8■□□□□ 0.44
SUMO1-209ENST00000409712 SMC1AQ14683 1233 aaKnown RBP17.8■□□□□ 0.44
SUMO1-209ENST00000409712 PTPN14Q15678 1187 aa17.8■□□□□ 0.44
SUMO1-209ENST00000409712 PTPROQ16827 1216 aa17.8■□□□□ 0.44
SUMO1-209ENST00000409712 UVSSAQ2YD98 709 aa17.8■□□□□ 0.44
SUMO1-209ENST00000409712 WSCD1Q658N2 575 aa17.8■□□□□ 0.44
SUMO1-209ENST00000409712 SARM1Q6SZW1 724 aa17.8■□□□□ 0.44
SUMO1-209ENST00000409712 SCARA5Q6ZMJ2 495 aa17.8■□□□□ 0.44
SUMO1-209ENST00000409712 ANKS3Q6ZW76 656 aa17.8■□□□□ 0.44
SUMO1-209ENST00000409712 TMC7Q7Z402 723 aa17.8■□□□□ 0.44
SUMO1-209ENST00000409712 METTL23Q86XA0 190 aa17.8■□□□□ 0.44
SUMO1-209ENST00000409712 LNX1Q8TBB1 728 aaPredicted RBP17.8■□□□□ 0.44
SUMO1-209ENST00000409712 KBTBD7Q8WVZ9 684 aa17.8■□□□□ 0.44
SUMO1-209ENST00000409712 RIN2Q8WYP3 895 aaPredicted RBP17.8■□□□□ 0.44
SUMO1-209ENST00000409712 SMYD3Q9H7B4 428 aa17.8■□□□□ 0.44
SUMO1-209ENST00000409712 SIX2Q9NPC8 291 aa17.8■□□□□ 0.44
SUMO1-209ENST00000409712 PLCB1Q9NQ66 1216 aa17.8■□□□□ 0.44
SUMO1-209ENST00000409712 ENTPD7Q9NQZ7 604 aa17.8■□□□□ 0.44
SUMO1-209ENST00000409712 MRPL17Q9NRX2 175 aaKnown RBP17.8■□□□□ 0.44
SUMO1-209ENST00000409712 IFNKQ9P0W0 207 aa17.8■□□□□ 0.44
SUMO1-209ENST00000409712 APEX2Q9UBZ4 518 aa17.8■□□□□ 0.44
SUMO1-209ENST00000409712 SIK3Q9Y2K2 1263 aa17.8■□□□□ 0.44
SUMO1-209ENST00000409712 TIMM13Q9Y5L4 95 aaPredicted RBP17.8■□□□□ 0.44
SUMO1-209ENST00000409712 CHD7Q9P2D1 2997 aa17.79■□□□□ 0.44
SUMO1-209ENST00000409712 H7C4K7 107 aa17.79■□□□□ 0.44
SUMO1-209ENST00000409712 RFXAPO00287 272 aa17.79■□□□□ 0.44
SUMO1-209ENST00000409712 GABRDO14764 452 aa17.79■□□□□ 0.44
SUMO1-209ENST00000409712 TEX33O43247 280 aa17.79■□□□□ 0.44
SUMO1-209ENST00000409712 CBFA2T2O43439 604 aa17.79■□□□□ 0.44
SUMO1-209ENST00000409712 LILRB3O75022 631 aa17.79■□□□□ 0.44
SUMO1-209ENST00000409712 CREMQ03060 361 aa17.79■□□□□ 0.44
SUMO1-209ENST00000409712 CUL2Q13617 745 aa17.79■□□□□ 0.44
SUMO1-209ENST00000409712 GRIN2CQ14957 1233 aa17.79■□□□□ 0.44
SUMO1-209ENST00000409712 SYCP1Q15431 976 aa17.79■□□□□ 0.44
SUMO1-209ENST00000409712 PSMD5Q16401 504 aa17.79■□□□□ 0.44
SUMO1-209ENST00000409712 OVOS1Q6IE37 1185 aa17.79■□□□□ 0.44
SUMO1-209ENST00000409712 ZNF280DQ6N043 979 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms