RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 RPRD1AQ96P16 312 aaPredicted RBP8.8□□□□□ -1
SCN9A-203ENST00000409672 KCTD10Q9H3F6 313 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 ANGPTL2Q9UKU9 493 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.8□□□□□ -1
SCN9A-203ENST00000409672 ANGPT2O15123 496 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 RGS2P41220 211 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 ACTR2P61160 394 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 SHROOM1Q2M3G4 852 aaPredicted RBP8.8□□□□□ -1
SCN9A-203ENST00000409672 TPGS1Q6ZTW0 290 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 MRPS31Q92665 395 aaKnown RBP8.8□□□□□ -1
SCN9A-203ENST00000409672 FHOD1Q9Y613 1164 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 CDC42BPGQ6DT37 1551 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 TRIM16O95361 564 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 MMEP08473 750 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 SCP2P22307 547 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 MAP2K2P36507 400 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 SRSF11Q05519 484 aaKnown RBP8.8□□□□□ -1
SCN9A-203ENST00000409672 TFDP2Q14188 446 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 EML3Q32P44 896 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 CAPRIN2Q6IMN6 1127 aaKnown RBP8.8□□□□□ -1
SCN9A-203ENST00000409672 NFRKBQ6P4R8 1299 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 EXD1Q8NHP7 514 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 BFARQ9NZS9 450 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 AXIN2Q9Y2T1 843 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 ESYT3A0FGR9 886 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 A6NNZ2 444 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 HMGB1P1B2RPK0 211 aaPredicted RBP8.8□□□□□ -1
SCN9A-203ENST00000409672 FEN1P39748 380 aaKnown RBP8.8□□□□□ -1
SCN9A-203ENST00000409672 GTF2A2P52657 109 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 RBP5P82980 135 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 TUBB8Q3ZCM7 444 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 FAM124AQ86V42 546 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 SP8Q8IXZ3 490 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 RSPH1Q8WYR4 309 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 TMEM117Q9H0C3 514 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.8□□□□□ -1
SCN9A-203ENST00000409672 NUP153P49790 1475 aaKnown RBP8.8□□□□□ -1
SCN9A-203ENST00000409672 FYNP06241 537 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 STAG3L1P0CL83 205 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 GYS1P13807 737 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 GTF2E2P29084 291 aaKnown RBP8.8□□□□□ -1
SCN9A-203ENST00000409672 FNTAP49354 379 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 LRRC63Q05C16 580 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 SGCGQ13326 291 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 NOTUMQ6P988 496 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 CEP68Q76N32 757 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 TRMT11Q7Z4G4 463 aaKnown RBP8.8□□□□□ -1
SCN9A-203ENST00000409672 SYTL1Q8IYJ3 562 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 STRBPQ96SI9 672 aaKnown RBP8.8□□□□□ -1
SCN9A-203ENST00000409672 TEX13BQ9BXU2 312 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 DYRK3O43781 588 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 STAU1O95793 577 aaKnown RBP8.8□□□□□ -1
SCN9A-203ENST00000409672 FAXCQ5TGI0 409 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 GRAMD4Q6IC98 578 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 UNC13DQ70J99 1090 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 TRIM69Q86WT6 500 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 DHX40Q8IX18 779 aaKnown RBP8.8□□□□□ -1
SCN9A-203ENST00000409672 SERAC1Q96JX3 654 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 ATXN3LQ9H3M9 355 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 PAPOLBQ9NRJ5 636 aaKnown RBP8.8□□□□□ -1
SCN9A-203ENST00000409672 SOHLH2Q9NX45 425 aa8.8□□□□□ -1
SCN9A-203ENST00000409672 PTPRKQ15262 1439 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 KRT38O76015 456 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 CCNE1P24864 410 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 HPDLQ96IR7 371 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 WWOXQ9NZC7 414 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 THEGQ9P2T0 379 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 RPS6KB2Q9UBS0 482 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 ODC1P11926 461 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 SKIV2L2P42285 1042 aaKnown RBP8.79□□□□□ -1
SCN9A-203ENST00000409672 PFKFB3Q16875 520 aaPredicted RBP8.79□□□□□ -1
SCN9A-203ENST00000409672 KIAA1324Q6UXG2 1013 aaKnown RBP8.79□□□□□ -1
SCN9A-203ENST00000409672 DET1Q7L5Y6 550 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 ANKRD13AQ8IZ07 590 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 MYRIPQ8NFW9 859 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 SGF29Q96ES7 293 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 HDAC6Q9UBN7 1215 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 STRNO43815 780 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 H2AFYO75367 372 aaKnown RBP8.79□□□□□ -1
SCN9A-203ENST00000409672 FAM200BP0CF97 657 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 ACOX1Q15067 660 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 CLEC16AQ2KHT3 1053 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 CTXN3Q4LDR2 81 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 C2CD6Q53TS8 623 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 EPHA10Q5JZY3 1008 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 CDC42EP5Q6NZY7 148 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 CCDC81Q6ZN84 652 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 MAP4K1Q92918 833 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 PCMTD2Q9NV79 361 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 ERAP1Q9NZ08 941 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 ZNF229Q9UJW7 825 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 CPSF4O95639 269 aaKnown RBP8.79□□□□□ -1
SCN9A-203ENST00000409672 SERPINB4P48594 390 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 EPHB3P54753 998 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 B3GALNT2Q8NCR0 500 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 FAM129AQ9BZQ8 928 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 PZPP20742 1482 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 CBX4O00257 560 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 CTIFO43310 598 aaKnown RBP8.79□□□□□ -1
SCN9A-203ENST00000409672 EIF2S1P05198 315 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms