RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 APPL2Q8NEU8 664 aa17.83■□□□□ 0.44
SUMO1-208ENST00000409627 SPATA18Q8TC71 538 aa17.83■□□□□ 0.44
SUMO1-208ENST00000409627 GDPD5Q8WTR4 605 aa17.83■□□□□ 0.44
SUMO1-208ENST00000409627 NT5C1BQ96P26 610 aa17.83■□□□□ 0.44
SUMO1-208ENST00000409627 CRACR2AQ9BSW2 395 aa17.83■□□□□ 0.44
SUMO1-208ENST00000409627 TTPALQ9BTX7 342 aa17.83■□□□□ 0.44
SUMO1-208ENST00000409627 NIF3L1Q9GZT8 377 aa17.83■□□□□ 0.44
SUMO1-208ENST00000409627 RTN4Q9NQC3 1192 aaKnown RBP17.83■□□□□ 0.44
SUMO1-208ENST00000409627 TLR9Q9NR96 1032 aa17.83■□□□□ 0.44
SUMO1-208ENST00000409627 NXF1Q9UBU9 619 aaKnown RBP17.83■□□□□ 0.44
SUMO1-208ENST00000409627 URODP06132 367 aa17.82■□□□□ 0.44
SUMO1-208ENST00000409627 FAM163BP0C2L3 166 aa17.82■□□□□ 0.44
SUMO1-208ENST00000409627 PON1P27169 355 aa17.82■□□□□ 0.44
SUMO1-208ENST00000409627 ASPAP45381 313 aa17.82■□□□□ 0.44
SUMO1-208ENST00000409627 UBXN1Q04323 297 aa17.82■□□□□ 0.44
SUMO1-208ENST00000409627 KCNMA1Q12791 1236 aa17.82■□□□□ 0.44
SUMO1-208ENST00000409627 SOWAHAQ2M3V2 549 aa17.82■□□□□ 0.44
SUMO1-208ENST00000409627 RTP2Q5QGT7 225 aa17.82■□□□□ 0.44
SUMO1-208ENST00000409627 PDE12Q6L8Q7 609 aaKnown RBP17.82■□□□□ 0.44
SUMO1-208ENST00000409627 PDXDC1Q6P996 788 aa17.82■□□□□ 0.44
SUMO1-208ENST00000409627 TMEM86AQ8N2M4 240 aa17.82■□□□□ 0.44
SUMO1-208ENST00000409627 PIK3R5Q8WYR1 880 aa17.82■□□□□ 0.44
SUMO1-208ENST00000409627 ELMO3Q96BJ8 720 aa17.82■□□□□ 0.44
SUMO1-208ENST00000409627 NAP1L5Q96NT1 182 aaPredicted RBP17.82■□□□□ 0.44
SUMO1-208ENST00000409627 ERGIC2Q96RQ1 377 aa17.82■□□□□ 0.44
SUMO1-208ENST00000409627 BCO2Q9BYV7 579 aa17.82■□□□□ 0.44
SUMO1-208ENST00000409627 L1RE1Q9UN81 338 aa17.82■□□□□ 0.44
SUMO1-208ENST00000409627 POLIQ9UNA4 740 aa17.82■□□□□ 0.44
SUMO1-208ENST00000409627 SSX2IPQ9Y2D8 614 aa17.82■□□□□ 0.44
SUMO1-208ENST00000409627 FSCN2O14926 492 aa17.81■□□□□ 0.44
SUMO1-208ENST00000409627 LPXNO60711 386 aa17.81■□□□□ 0.44
SUMO1-208ENST00000409627 TACC1O75410 805 aa17.81■□□□□ 0.44
SUMO1-208ENST00000409627 SLC9A1P19634 815 aa17.81■□□□□ 0.44
SUMO1-208ENST00000409627 UBASH3AP57075 661 aa17.81■□□□□ 0.44
SUMO1-208ENST00000409627 ERVFC1P60507 584 aa17.81■□□□□ 0.44
SUMO1-208ENST00000409627 CAMK1Q14012 370 aa17.81■□□□□ 0.44
SUMO1-208ENST00000409627 MRPL58Q14197 206 aaKnown RBP17.81■□□□□ 0.44
SUMO1-208ENST00000409627 BMS1Q14692 1282 aaKnown RBP17.81■□□□□ 0.44
SUMO1-208ENST00000409627 NR1I3Q14994 352 aa17.81■□□□□ 0.44
SUMO1-208ENST00000409627 VARS2Q5ST30 1063 aaKnown RBP17.81■□□□□ 0.44
SUMO1-208ENST00000409627 KIAA0319Q5VV43 1072 aa17.81■□□□□ 0.44
SUMO1-208ENST00000409627 KIAA1841Q6NSI8 718 aa17.81■□□□□ 0.44
SUMO1-208ENST00000409627 CEP57Q86XR8 500 aa17.81■□□□□ 0.44
SUMO1-208ENST00000409627 ADGRF2Q8IZF7 708 aa17.81■□□□□ 0.44
SUMO1-208ENST00000409627 PDCL2Q8N4E4 241 aa17.81■□□□□ 0.44
SUMO1-208ENST00000409627 TATDN2Q93075 761 aa17.81■□□□□ 0.44
SUMO1-208ENST00000409627 B3GALT6Q96L58 329 aa17.81■□□□□ 0.44
SUMO1-208ENST00000409627 MMS19Q96T76 1030 aa17.81■□□□□ 0.44
SUMO1-208ENST00000409627 TCF25Q9BQ70 676 aa17.81■□□□□ 0.44
SUMO1-208ENST00000409627 FAM124BQ9H5Z6 455 aaPredicted RBP17.81■□□□□ 0.44
SUMO1-208ENST00000409627 CYP3A43Q9HB55 503 aa17.81■□□□□ 0.44
SUMO1-208ENST00000409627 NGRNQ9NPE2 291 aaKnown RBP17.81■□□□□ 0.44
SUMO1-208ENST00000409627 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.81■□□□□ 0.445e-8■■■■■ 101.2
SUMO1-208ENST00000409627 IRAK3Q9Y616 596 aa17.81■□□□□ 0.44
SUMO1-208ENST00000409627 LAMA3Q16787 3333 aa17.8■□□□□ 0.44
SUMO1-208ENST00000409627 OAZ2O95190 189 aa17.8■□□□□ 0.44
SUMO1-208ENST00000409627 WARSP23381 471 aaKnown RBP17.8■□□□□ 0.44
SUMO1-208ENST00000409627 TBXAS1P24557 533 aaPredicted RBP17.8■□□□□ 0.44
SUMO1-208ENST00000409627 GCNT1Q02742 428 aa17.8■□□□□ 0.44
SUMO1-208ENST00000409627 YWHAHQ04917 246 aaPredicted RBP17.8■□□□□ 0.44
SUMO1-208ENST00000409627 LRMPQ12912 555 aa17.8■□□□□ 0.44
SUMO1-208ENST00000409627 SMC1AQ14683 1233 aaKnown RBP17.8■□□□□ 0.44
SUMO1-208ENST00000409627 PTPN14Q15678 1187 aa17.8■□□□□ 0.44
SUMO1-208ENST00000409627 PTPROQ16827 1216 aa17.8■□□□□ 0.44
SUMO1-208ENST00000409627 UVSSAQ2YD98 709 aa17.8■□□□□ 0.44
SUMO1-208ENST00000409627 WSCD1Q658N2 575 aa17.8■□□□□ 0.44
SUMO1-208ENST00000409627 SARM1Q6SZW1 724 aa17.8■□□□□ 0.44
SUMO1-208ENST00000409627 SCARA5Q6ZMJ2 495 aa17.8■□□□□ 0.44
SUMO1-208ENST00000409627 ANKS3Q6ZW76 656 aa17.8■□□□□ 0.44
SUMO1-208ENST00000409627 TMC7Q7Z402 723 aa17.8■□□□□ 0.44
SUMO1-208ENST00000409627 METTL23Q86XA0 190 aa17.8■□□□□ 0.44
SUMO1-208ENST00000409627 LNX1Q8TBB1 728 aaPredicted RBP17.8■□□□□ 0.44
SUMO1-208ENST00000409627 KBTBD7Q8WVZ9 684 aa17.8■□□□□ 0.44
SUMO1-208ENST00000409627 RIN2Q8WYP3 895 aaPredicted RBP17.8■□□□□ 0.44
SUMO1-208ENST00000409627 SMYD3Q9H7B4 428 aa17.8■□□□□ 0.44
SUMO1-208ENST00000409627 SIX2Q9NPC8 291 aa17.8■□□□□ 0.44
SUMO1-208ENST00000409627 PLCB1Q9NQ66 1216 aa17.8■□□□□ 0.44
SUMO1-208ENST00000409627 ENTPD7Q9NQZ7 604 aa17.8■□□□□ 0.44
SUMO1-208ENST00000409627 MRPL17Q9NRX2 175 aaKnown RBP17.8■□□□□ 0.44
SUMO1-208ENST00000409627 IFNKQ9P0W0 207 aa17.8■□□□□ 0.44
SUMO1-208ENST00000409627 APEX2Q9UBZ4 518 aa17.8■□□□□ 0.44
SUMO1-208ENST00000409627 SIK3Q9Y2K2 1263 aa17.8■□□□□ 0.44
SUMO1-208ENST00000409627 TIMM13Q9Y5L4 95 aaPredicted RBP17.8■□□□□ 0.44
SUMO1-208ENST00000409627 CHD7Q9P2D1 2997 aa17.79■□□□□ 0.44
SUMO1-208ENST00000409627 H7C4K7 107 aa17.79■□□□□ 0.44
SUMO1-208ENST00000409627 RFXAPO00287 272 aa17.79■□□□□ 0.44
SUMO1-208ENST00000409627 GABRDO14764 452 aa17.79■□□□□ 0.44
SUMO1-208ENST00000409627 TEX33O43247 280 aa17.79■□□□□ 0.44
SUMO1-208ENST00000409627 CBFA2T2O43439 604 aa17.79■□□□□ 0.44
SUMO1-208ENST00000409627 LILRB3O75022 631 aa17.79■□□□□ 0.44
SUMO1-208ENST00000409627 CREMQ03060 361 aa17.79■□□□□ 0.44
SUMO1-208ENST00000409627 CUL2Q13617 745 aa17.79■□□□□ 0.44
SUMO1-208ENST00000409627 GRIN2CQ14957 1233 aa17.79■□□□□ 0.44
SUMO1-208ENST00000409627 SYCP1Q15431 976 aa17.79■□□□□ 0.44
SUMO1-208ENST00000409627 PSMD5Q16401 504 aa17.79■□□□□ 0.44
SUMO1-208ENST00000409627 OVOS1Q6IE37 1185 aa17.79■□□□□ 0.44
SUMO1-208ENST00000409627 ZNF280DQ6N043 979 aa17.79■□□□□ 0.44
SUMO1-208ENST00000409627 PHLDB3Q6NSJ2 640 aa17.79■□□□□ 0.44
SUMO1-208ENST00000409627 DPY19L2P1Q6NXN4 242 aa17.79■□□□□ 0.44
SUMO1-208ENST00000409627 ARHGEF19Q8IW93 802 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms