RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 ELMOD1Q8N336 334 aa21.19■□□□□ 0.98
TSPAN4-209ENST00000409543 ZNF507Q8TCN5 953 aa21.19■□□□□ 0.98
TSPAN4-209ENST00000409543 CACTINQ8WUQ7 758 aaKnown RBP21.19■□□□□ 0.98
TSPAN4-209ENST00000409543 BORCS6Q96GS4 357 aa21.19■□□□□ 0.98
TSPAN4-209ENST00000409543 CORO1BQ9BR76 489 aa21.19■□□□□ 0.98
TSPAN4-209ENST00000409543 RPP25Q9BUL9 199 aaKnown RBP21.19■□□□□ 0.98
TSPAN4-209ENST00000409543 GDE1Q9NZC3 331 aa21.19■□□□□ 0.98
TSPAN4-209ENST00000409543 ZDHHC9Q9Y397 364 aa21.19■□□□□ 0.98
TSPAN4-209ENST00000409543 CYB561D2O14569 222 aa21.18■□□□□ 0.98
TSPAN4-209ENST00000409543 ZNF197O14709 1029 aa21.18■□□□□ 0.98
TSPAN4-209ENST00000409543 MICAL2O94851 1124 aa21.18■□□□□ 0.98
TSPAN4-209ENST00000409543 VNN2O95498 520 aa21.18■□□□□ 0.98
TSPAN4-209ENST00000409543 NPR3P17342 541 aa21.18■□□□□ 0.98
TSPAN4-209ENST00000409543 PNPLA4P41247 253 aa21.18■□□□□ 0.98
TSPAN4-209ENST00000409543 PTPN5P54829 565 aa21.18■□□□□ 0.98
TSPAN4-209ENST00000409543 TFAMQ00059 246 aaKnown RBP21.18■□□□□ 0.98
TSPAN4-209ENST00000409543 NHLH1Q02575 133 aa21.18■□□□□ 0.98
TSPAN4-209ENST00000409543 EHHADHQ08426 723 aa21.18■□□□□ 0.98
TSPAN4-209ENST00000409543 SV2CQ496J9 727 aa21.18■□□□□ 0.98
TSPAN4-209ENST00000409543 PRSS36Q5K4E3 855 aa21.18■□□□□ 0.98
TSPAN4-209ENST00000409543 IQCEQ6IPM2 695 aa21.18■□□□□ 0.98
TSPAN4-209ENST00000409543 METTL23Q86XA0 190 aa21.18■□□□□ 0.98
TSPAN4-209ENST00000409543 SIX5Q8N196 739 aa21.18■□□□□ 0.98
TSPAN4-209ENST00000409543 TMEM105Q8N8V8 129 aa21.18■□□□□ 0.98
TSPAN4-209ENST00000409543 ST13P5Q8NFI4 369 aaPredicted RBP21.18■□□□□ 0.98
TSPAN4-209ENST00000409543 ING5Q8WYH8 240 aa21.18■□□□□ 0.98
TSPAN4-209ENST00000409543 ZNF512Q96ME7 567 aaPredicted RBP21.18■□□□□ 0.98
TSPAN4-209ENST00000409543 PGLYRP2Q96PD5 576 aa21.18■□□□□ 0.98
TSPAN4-209ENST00000409543 SLC2A4RGQ9NR83 387 aa21.18■□□□□ 0.98
TSPAN4-209ENST00000409543 CEP72Q9P209 647 aa21.18■□□□□ 0.98
TSPAN4-209ENST00000409543 PVALEFA0A1B0GWK0 134 aa21.17■□□□□ 0.98
TSPAN4-209ENST00000409543 KPNA7A9QM74 516 aa21.17■□□□□ 0.98
TSPAN4-209ENST00000409543 CYP4A22Q5TCH4 519 aa21.17■□□□□ 0.98
TSPAN4-209ENST00000409543 CENPPQ6IPU0 288 aa21.17■□□□□ 0.98
TSPAN4-209ENST00000409543 LEMD2Q8NC56 503 aa21.17■□□□□ 0.98
TSPAN4-209ENST00000409543 FLCNQ8NFG4 579 aa21.17■□□□□ 0.98
TSPAN4-209ENST00000409543 ZNF560Q96MR9 790 aa21.17■□□□□ 0.98
TSPAN4-209ENST00000409543 BLZF1Q9H2G9 400 aa21.17■□□□□ 0.98
TSPAN4-209ENST00000409543 YIPF1Q9Y548 306 aa21.17■□□□□ 0.98
TSPAN4-209ENST00000409543 TSC2P49815 1807 aa21.16■□□□□ 0.98
TSPAN4-209ENST00000409543 UBE4BO95155 1302 aa21.16■□□□□ 0.98
TSPAN4-209ENST00000409543 ZNF233A6NK53 670 aa21.16■□□□□ 0.98
TSPAN4-209ENST00000409543 TULP1O00294 542 aaPredicted RBP21.16■□□□□ 0.98
TSPAN4-209ENST00000409543 SLFN14P0C7P3 912 aa21.16■□□□□ 0.98
TSPAN4-209ENST00000409543 CMA1P23946 247 aa21.16■□□□□ 0.98
TSPAN4-209ENST00000409543 CASP1P29466 404 aa21.16■□□□□ 0.98
TSPAN4-209ENST00000409543 AFMP43652 599 aa21.16■□□□□ 0.98
TSPAN4-209ENST00000409543 EPHA5P54756 1037 aa21.16■□□□□ 0.98
TSPAN4-209ENST00000409543 DUSP4Q13115 394 aa21.16■□□□□ 0.98
TSPAN4-209ENST00000409543 PLD1Q13393 1074 aa21.16■□□□□ 0.98
TSPAN4-209ENST00000409543 CWF19L1Q69YN2 538 aaKnown RBP21.16■□□□□ 0.98
TSPAN4-209ENST00000409543 PDZD4Q76G19 769 aaPredicted RBP21.16■□□□□ 0.98
TSPAN4-209ENST00000409543 CEP57L1Q8IYX8 460 aa21.16■□□□□ 0.98
TSPAN4-209ENST00000409543 THEM5Q8N1Q8 247 aa21.16■□□□□ 0.98
TSPAN4-209ENST00000409543 C1orf127Q8N9H9 656 aa21.16■□□□□ 0.98
TSPAN4-209ENST00000409543 OR10T2Q8NGX3 314 aa21.16■□□□□ 0.98
TSPAN4-209ENST00000409543 GPR152Q8TDT2 470 aa21.16■□□□□ 0.98
TSPAN4-209ENST00000409543 NOC3LQ8WTT2 800 aaKnown RBP21.16■□□□□ 0.98
TSPAN4-209ENST00000409543 LEO1Q8WVC0 666 aaPredicted RBP21.16■□□□□ 0.98
TSPAN4-209ENST00000409543 MCRS1Q96EZ8 462 aa21.16■□□□□ 0.98
TSPAN4-209ENST00000409543 TMEM209Q96SK2 561 aa21.16■□□□□ 0.98
TSPAN4-209ENST00000409543 CRISPLD1Q9H336 500 aa21.16■□□□□ 0.98
TSPAN4-209ENST00000409543 KIAA1586Q9HCI6 787 aa21.16■□□□□ 0.98
TSPAN4-209ENST00000409543 PDE11AQ9HCR9 933 aa21.16■□□□□ 0.98
TSPAN4-209ENST00000409543 HSFX1Q9UBD0 423 aa21.16■□□□□ 0.98
TSPAN4-209ENST00000409543 ITGA11Q9UKX5 1188 aa21.16■□□□□ 0.98
TSPAN4-209ENST00000409543 AGAP1Q9UPQ3 857 aa21.16■□□□□ 0.98
TSPAN4-209ENST00000409543 MTMR11A4FU01 709 aa21.15■□□□□ 0.98
TSPAN4-209ENST00000409543 KRBA1A5PL33 1030 aa21.15■□□□□ 0.98
TSPAN4-209ENST00000409543 ITGB3P05106 788 aa21.15■□□□□ 0.98
TSPAN4-209ENST00000409543 CEBPBP17676 345 aa21.15■□□□□ 0.98
TSPAN4-209ENST00000409543 POLR2BP30876 1174 aaKnown RBP21.15■□□□□ 0.98
TSPAN4-209ENST00000409543 HOXD11P31277 338 aaPredicted RBP21.15■□□□□ 0.98
TSPAN4-209ENST00000409543 SNRPFP62306 86 aaKnown RBP21.15■□□□□ 0.98
TSPAN4-209ENST00000409543 KRT85P78386 507 aa21.15■□□□□ 0.98
TSPAN4-209ENST00000409543 TCF15Q12870 199 aa21.15■□□□□ 0.98
TSPAN4-209ENST00000409543 CUL4BQ13620 913 aa21.15■□□□□ 0.98
TSPAN4-209ENST00000409543 SURF1Q15526 300 aa21.15■□□□□ 0.98
TSPAN4-209ENST00000409543 WSCD1Q658N2 575 aa21.15■□□□□ 0.98
TSPAN4-209ENST00000409543 HS6ST3Q8IZP7 471 aa21.15■□□□□ 0.98
TSPAN4-209ENST00000409543 LRRC52Q8N7C0 313 aa21.15■□□□□ 0.98
TSPAN4-209ENST00000409543 ATAD1Q8NBU5 361 aa21.15■□□□□ 0.98
TSPAN4-209ENST00000409543 CXorf38Q8TB03 319 aa21.15■□□□□ 0.98
TSPAN4-209ENST00000409543 SCFD1Q8WVM8 642 aa21.15■□□□□ 0.98
TSPAN4-209ENST00000409543 TCEAL4Q96EI5 215 aa21.15■□□□□ 0.98
TSPAN4-209ENST00000409543 SPATA32Q96LK8 384 aa21.15■□□□□ 0.98
TSPAN4-209ENST00000409543 RTP3Q9BQQ7 232 aa21.15■□□□□ 0.98
TSPAN4-209ENST00000409543 ZCWPW1Q9H0M4 648 aa21.15■□□□□ 0.98
TSPAN4-209ENST00000409543 HSPBP1Q9NZL4 362 aa21.15■□□□□ 0.98
TSPAN4-209ENST00000409543 SERTAD1Q9UHV2 236 aa21.15■□□□□ 0.98
TSPAN4-209ENST00000409543 TGFB1I1O43294 461 aa21.14■□□□□ 0.97
TSPAN4-209ENST00000409543 GALR2O43603 387 aaPredicted RBP21.14■□□□□ 0.97
TSPAN4-209ENST00000409543 AOC1P19801 751 aa21.14■□□□□ 0.97
TSPAN4-209ENST00000409543 CCR2P41597 374 aa21.14■□□□□ 0.97
TSPAN4-209ENST00000409543 ALDH1A3P47895 512 aa21.14■□□□□ 0.97
TSPAN4-209ENST00000409543 EPHB3P54753 998 aa21.14■□□□□ 0.97
TSPAN4-209ENST00000409543 GPC5P78333 572 aa21.14■□□□□ 0.97
TSPAN4-209ENST00000409543 POTEHQ6S545 545 aa21.14■□□□□ 0.97
TSPAN4-209ENST00000409543 CBWD2Q8IUF1 395 aa21.14■□□□□ 0.97
TSPAN4-209ENST00000409543 CSGALNACT2Q8N6G5 542 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms