RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 GABRDO14764 452 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 LUC7L3O95232 432 aaKnown RBP5.98□□□□□ -1.45
CLK1-202ENST00000409403 SERPINC1P01008 464 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 PTX3P26022 381 aaPredicted RBP5.98□□□□□ -1.45
CLK1-202ENST00000409403 TM4SF1P30408 202 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 LSP1P33241 339 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 RPS6KA3P51812 740 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 NEK2P51955 445 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 GP2P55259 537 aaKnown RBP5.98□□□□□ -1.45
CLK1-202ENST00000409403 UBASH3AP57075 661 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 MYL5Q02045 173 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 APBA1Q02410 837 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 ACTN3Q08043 901 aaPredicted RBP5.98□□□□□ -1.45
CLK1-202ENST00000409403 TMEM62Q0P6H9 643 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 RESTQ13127 1097 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 MTA1Q13330 715 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 KRT32Q14532 448 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 NAA25Q14CX7 972 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 CCDC40Q4G0X9 1142 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 HSP90AB4PQ58FF6 505 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 GPR158Q5T848 1215 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 FYB2Q5VWT5 728 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 TTC19Q6DKK2 380 aaPredicted RBP5.98□□□□□ -1.45
CLK1-202ENST00000409403 RPTNQ6XPR3 784 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 USP50Q70EL3 339 aaPredicted RBP5.98□□□□□ -1.45
CLK1-202ENST00000409403 ARRDC4Q8NCT1 418 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 TTLL11Q8NHH1 800 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 SMARCC2Q8TAQ2 1214 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 CCDC47Q96A33 483 aaKnown RBP5.98□□□□□ -1.45
CLK1-202ENST00000409403 AHCYL2Q96HN2 611 aaKnown RBP5.98□□□□□ -1.45
CLK1-202ENST00000409403 RUFY1Q96T51 708 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 SDF4Q9BRK5 362 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 LLPHQ9BRT6 129 aaKnown RBP5.98□□□□□ -1.45
CLK1-202ENST00000409403 SLC6A17Q9H1V8 727 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 SLC12A5Q9H2X9 1139 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 VTA1Q9NP79 307 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 CHCHD3Q9NX63 227 aaKnown RBP5.98□□□□□ -1.45
CLK1-202ENST00000409403 HMG20BQ9P0W2 317 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 ASAP1Q9ULH1 1129 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 ZNF609O15014 1411 aa5.97□□□□□ -1.45
CLK1-202ENST00000409403 MYH15Q9Y2K3 1946 aa5.97□□□□□ -1.45
CLK1-202ENST00000409403 FZD9O00144 591 aa5.97□□□□□ -1.45
CLK1-202ENST00000409403 NDUFAB1O14561 156 aa5.97□□□□□ -1.45
CLK1-202ENST00000409403 N4BP1O75113 896 aaKnown RBP5.97□□□□□ -1.45
CLK1-202ENST00000409403 COQ9O75208 318 aa5.97□□□□□ -1.45
CLK1-202ENST00000409403 RASSF9O75901 435 aa5.97□□□□□ -1.45
CLK1-202ENST00000409403 LARGE1O95461 756 aa5.97□□□□□ -1.45
CLK1-202ENST00000409403 MYBL2P10244 700 aa5.97□□□□□ -1.45
CLK1-202ENST00000409403 SDHAP31040 664 aa5.97□□□□□ -1.45
CLK1-202ENST00000409403 ERVK-21P61565 698 aa5.97□□□□□ -1.45
CLK1-202ENST00000409403 GNGT1P63211 74 aa5.97□□□□□ -1.45
CLK1-202ENST00000409403 LRRC32Q14392 662 aa5.97□□□□□ -1.45
CLK1-202ENST00000409403 KCTD2Q14681 263 aa5.97□□□□□ -1.45
CLK1-202ENST00000409403 SLC5A9Q2M3M2 681 aa5.97□□□□□ -1.45
CLK1-202ENST00000409403 SDCCAG8Q86SQ7 713 aaPredicted RBP5.97□□□□□ -1.45
CLK1-202ENST00000409403 ATG4DQ86TL0 474 aaPredicted RBP5.97□□□□□ -1.45
CLK1-202ENST00000409403 RASSF3Q86WH2 238 aa5.97□□□□□ -1.45
CLK1-202ENST00000409403 MFN1Q8IWA4 741 aa5.97□□□□□ -1.45
CLK1-202ENST00000409403 ZZZ3Q8IYH5 903 aa5.97□□□□□ -1.45
CLK1-202ENST00000409403 CCDC170Q8IYT3 715 aa5.97□□□□□ -1.45
CLK1-202ENST00000409403 ZNF610Q8N9Z0 462 aa5.97□□□□□ -1.45
CLK1-202ENST00000409403 FSIP1Q8NA03 581 aa5.97□□□□□ -1.45
CLK1-202ENST00000409403 DRAXINQ8NBI3 349 aaPredicted RBP5.97□□□□□ -1.45
CLK1-202ENST00000409403 TSPAN17Q96FV3 270 aa5.97□□□□□ -1.45
CLK1-202ENST00000409403 WDR24Q96S15 920 aa5.97□□□□□ -1.45
CLK1-202ENST00000409403 NAPGQ99747 312 aaPredicted RBP5.97□□□□□ -1.45
CLK1-202ENST00000409403 TCEAL9Q9UHQ7 104 aa5.97□□□□□ -1.45
CLK1-202ENST00000409403 ANAPC4Q9UJX5 808 aa5.97□□□□□ -1.45
CLK1-202ENST00000409403 HPCAL4Q9UM19 191 aa5.97□□□□□ -1.45
CLK1-202ENST00000409403 SPEF1Q9Y4P9 236 aa5.97□□□□□ -1.45
CLK1-202ENST00000409403 ZNF646O15015 1829 aaPredicted RBP5.96□□□□□ -1.46
CLK1-202ENST00000409403 KIF20BQ96Q89 1820 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 TCF20Q9UGU0 1960 aaKnown RBP5.96□□□□□ -1.46
CLK1-202ENST00000409403 OR14I1A6ND48 311 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 GOLGA6BA6NDN3 693 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 PRAMEF25A6NGN4 478 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 GOLGA6L10A6NI86 522 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 ANKRD65E5RJM6 399 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 AHCYL1O43865 530 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 PFKFB2O60825 505 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 RPS6KA4O75676 772 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 FBXO21O94952 628 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 SYF2O95926 243 aaKnown RBP5.96□□□□□ -1.46
CLK1-202ENST00000409403 C4BPAP04003 597 aaKnown RBP5.96□□□□□ -1.46
CLK1-202ENST00000409403 SLC3A2P08195 630 aaKnown RBP5.96□□□□□ -1.46
CLK1-202ENST00000409403 EPB41P11171 864 aaKnown RBP5.96□□□□□ -1.46
CLK1-202ENST00000409403 ATP5JP18859 108 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 PRKAR2BP31323 418 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 MAPKAPK2P49137 400 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 FNTBP49356 437 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 VSNL1P62760 191 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 PRR5P85299 388 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 GRIN1Q05586 938 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 MCL1Q07820 350 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 ME3Q16798 604 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 SLC4A8Q2Y0W8 1093 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 PLEKHN1Q494U1 663 aaPredicted RBP5.96□□□□□ -1.46
CLK1-202ENST00000409403 BLOC1S2Q6QNY1 142 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 OLFM4Q6UX06 510 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 ARMC9Q7Z3E5 817 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms