RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 BAIAP3O94812 1187 aa18.01■□□□□ 0.47
SSB-202ENST00000409333 AMHP03971 560 aa18.01■□□□□ 0.47
SSB-202ENST00000409333 EIF4A3P38919 411 aaKnown RBP18.01■□□□□ 0.47
SSB-202ENST00000409333 PTK2Q05397 1052 aa18.01■□□□□ 0.47
SSB-202ENST00000409333 PAN2Q504Q3 1202 aaKnown RBP18.01■□□□□ 0.47
SSB-202ENST00000409333 ZNF365Q70YC5 407 aa18.01■□□□□ 0.47
SSB-202ENST00000409333 COLGALT2Q8IYK4 626 aa18.01■□□□□ 0.47
SSB-202ENST00000409333 CNTN6Q9UQ52 1028 aa18.01■□□□□ 0.47
SSB-202ENST00000409333 DGKIO75912 1065 aa18■□□□□ 0.47
SSB-202ENST00000409333 MAPK8IP2Q13387 824 aaPredicted RBP18■□□□□ 0.47
SSB-202ENST00000409333 FAM117BQ6P1L5 589 aa18■□□□□ 0.47
SSB-202ENST00000409333 TOGARAM2Q6ZUX3 1019 aa18■□□□□ 0.47
SSB-202ENST00000409333 ZNF571Q7Z3V5 609 aaPredicted RBP18■□□□□ 0.47
SSB-202ENST00000409333 FMNL3Q8IVF7 1028 aa18■□□□□ 0.47
SSB-202ENST00000409333 RBBP8NLQ8NC74 664 aaPredicted RBP18■□□□□ 0.47
SSB-202ENST00000409333 HASPINQ8TF76 798 aa18■□□□□ 0.47
SSB-202ENST00000409333 DPF3Q92784 378 aa18■□□□□ 0.47
SSB-202ENST00000409333 DDX27Q96GQ7 796 aaKnown RBP18■□□□□ 0.47
SSB-202ENST00000409333 UROC1Q96N76 676 aa18■□□□□ 0.47
SSB-202ENST00000409333 FAM193BQ96PV7 902 aaPredicted RBP18■□□□□ 0.47
SSB-202ENST00000409333 CYP3A43Q9HB55 503 aa18■□□□□ 0.47
SSB-202ENST00000409333 GDAP2Q9NXN4 497 aa18■□□□□ 0.47
SSB-202ENST00000409333 HMGXB4Q9UGU5 601 aa18■□□□□ 0.47
SSB-202ENST00000409333 NLRC5Q86WI3 1866 aa18■□□□□ 0.47
SSB-202ENST00000409333 LAMA2P24043 3122 aaKnown RBP17.99■□□□□ 0.47
SSB-202ENST00000409333 KIF4AO95239 1232 aa17.99■□□□□ 0.47
SSB-202ENST00000409333 ITGB1P05556 798 aa17.99■□□□□ 0.47
SSB-202ENST00000409333 CCDC172P0C7W6 258 aa17.99■□□□□ 0.47
SSB-202ENST00000409333 ZNF132P52740 706 aa17.99■□□□□ 0.47
SSB-202ENST00000409333 SOWAHAQ2M3V2 549 aa17.99■□□□□ 0.47
SSB-202ENST00000409333 ASTE1Q2TB18 679 aaPredicted RBP17.99■□□□□ 0.47
SSB-202ENST00000409333 ZNF394Q53GI3 561 aa17.99■□□□□ 0.47
SSB-202ENST00000409333 CD300LGQ6UXG3 332 aa17.99■□□□□ 0.47
SSB-202ENST00000409333 OLIG1Q8TAK6 271 aa17.99■□□□□ 0.47
SSB-202ENST00000409333 EPS8L1Q8TE68 723 aa17.99■□□□□ 0.47
SSB-202ENST00000409333 SLC20A1Q8WUM9 679 aa17.99■□□□□ 0.47
SSB-202ENST00000409333 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.99■□□□□ 0.474e-8■■■■■ 28.7
SSB-202ENST00000409333 MRPL45Q9BRJ2 306 aaKnown RBP17.99■□□□□ 0.47
SSB-202ENST00000409333 DESI2Q9BSY9 194 aa17.99■□□□□ 0.47
SSB-202ENST00000409333 NRDE2Q9H7Z3 1164 aa17.99■□□□□ 0.47
SSB-202ENST00000409333 BZW2Q9Y6E2 419 aaKnown RBP17.99■□□□□ 0.47
SSB-202ENST00000409333 SSU72P8A0A1W2PR75 194 aa17.99■□□□□ 0.47
SSB-202ENST00000409333 ZBBXA8MT70 800 aa17.99■□□□□ 0.47
SSB-202ENST00000409333 B3GAT3O94766 335 aa17.99■□□□□ 0.47
SSB-202ENST00000409333 FGBP02675 491 aa17.99■□□□□ 0.47
SSB-202ENST00000409333 CYP11B1P15538 503 aa17.99■□□□□ 0.47
SSB-202ENST00000409333 KIF11P52732 1056 aa17.99■□□□□ 0.47
SSB-202ENST00000409333 YWHAEP62258 255 aaKnown RBP17.99■□□□□ 0.47
SSB-202ENST00000409333 INCA1Q0VD86 236 aa17.99■□□□□ 0.47
SSB-202ENST00000409333 ORC1Q13415 861 aa17.99■□□□□ 0.47
SSB-202ENST00000409333 TMEM240Q5SV17 173 aa17.99■□□□□ 0.47
SSB-202ENST00000409333 NOP9Q86U38 636 aaKnown RBP17.99■□□□□ 0.47
SSB-202ENST00000409333 WHAMMQ8TF30 809 aa17.99■□□□□ 0.47
SSB-202ENST00000409333 SENP8Q96LD8 212 aa17.99■□□□□ 0.47
SSB-202ENST00000409333 CCDC42Q96M95 316 aa17.99■□□□□ 0.47
SSB-202ENST00000409333 TWNKQ96RR1 684 aa17.99■□□□□ 0.47
SSB-202ENST00000409333 SYT11Q9BT88 431 aa17.99■□□□□ 0.47
SSB-202ENST00000409333 MRPL9Q9BYD2 267 aaKnown RBP17.99■□□□□ 0.47
SSB-202ENST00000409333 DEF6Q9H4E7 631 aa17.99■□□□□ 0.47
SSB-202ENST00000409333 RC3H2Q9HBD1 1191 aaKnown RBP17.99■□□□□ 0.47
SSB-202ENST00000409333 SPTLC3Q9NUV7 552 aa17.99■□□□□ 0.47
SSB-202ENST00000409333 NOCTQ9UK39 431 aaKnown RBP17.99■□□□□ 0.47
SSB-202ENST00000409333 L1RE1Q9UN81 338 aa17.99■□□□□ 0.47
SSB-202ENST00000409333 EPN1Q9Y6I3 576 aaPredicted RBP17.99■□□□□ 0.47
SSB-202ENST00000409333 CEP290O15078 2479 aa17.98■□□□□ 0.47
SSB-202ENST00000409333 I3L4J1 428 aa17.98■□□□□ 0.47
SSB-202ENST00000409333 CILPO75339 1184 aa17.98■□□□□ 0.47
SSB-202ENST00000409333 NDUFA10O95299 355 aa17.98■□□□□ 0.47
SSB-202ENST00000409333 BRCC3P46736 316 aa17.98■□□□□ 0.47
SSB-202ENST00000409333 OR1G1P47890 313 aa17.98■□□□□ 0.47
SSB-202ENST00000409333 KCNJ6P48051 423 aa17.98■□□□□ 0.47
SSB-202ENST00000409333 AARSP49588 968 aaKnown RBP eCLIP17.98■□□□□ 0.47
SSB-202ENST00000409333 PDE6CP51160 858 aa17.98■□□□□ 0.47
SSB-202ENST00000409333 GFPT1Q06210 699 aaPredicted RBP17.98■□□□□ 0.47
SSB-202ENST00000409333 TIGD5Q53EQ6 642 aa17.98■□□□□ 0.47
SSB-202ENST00000409333 PSRC1Q6PGN9 363 aaPredicted RBP17.98■□□□□ 0.47
SSB-202ENST00000409333 LRRC43Q8N309 656 aa17.98■□□□□ 0.47
SSB-202ENST00000409333 ACRBPQ8NEB7 543 aa17.98■□□□□ 0.47
SSB-202ENST00000409333 APPL2Q8NEU8 664 aa17.98■□□□□ 0.47
SSB-202ENST00000409333 PRG3Q9Y2Y8 225 aaPredicted RBP17.98■□□□□ 0.47
SSB-202ENST00000409333 NME7Q9Y5B8 376 aa17.98■□□□□ 0.47
SSB-202ENST00000409333 CYB561D2O14569 222 aa17.97■□□□□ 0.47
SSB-202ENST00000409333 AKR1B10O60218 316 aa17.97■□□□□ 0.47
SSB-202ENST00000409333 GNA15P30679 374 aa17.97■□□□□ 0.47
SSB-202ENST00000409333 TAF3Q5VWG9 929 aa17.97■□□□□ 0.47
SSB-202ENST00000409333 DCLRE1AQ6PJP8 1040 aa17.97■□□□□ 0.47
SSB-202ENST00000409333 LIMS2Q7Z4I7 341 aa17.97■□□□□ 0.47
SSB-202ENST00000409333 CCDC170Q8IYT3 715 aa17.97■□□□□ 0.47
SSB-202ENST00000409333 C17orf53Q8N3J3 647 aaPredicted RBP17.97■□□□□ 0.47
SSB-202ENST00000409333 TOP6BLQ8N6T0 577 aa17.97■□□□□ 0.47
SSB-202ENST00000409333 KBTBD7Q8WVZ9 684 aa17.97■□□□□ 0.47
SSB-202ENST00000409333 ZNF689Q96CS4 500 aaPredicted RBP17.97■□□□□ 0.47
SSB-202ENST00000409333 ELOVL4Q9GZR5 314 aa17.97■□□□□ 0.47
SSB-202ENST00000409333 CXXC1Q9P0U4 656 aaPredicted RBP17.97■□□□□ 0.47
SSB-202ENST00000409333 ADAMTS1Q9UHI8 967 aa17.97■□□□□ 0.47
SSB-202ENST00000409333 BARX2Q9UMQ3 279 aaPredicted RBP17.97■□□□□ 0.47
SSB-202ENST00000409333 A0A087X0T9 212 aa17.96■□□□□ 0.47
SSB-202ENST00000409333 ZNF263O14978 683 aa17.96■□□□□ 0.47
SSB-202ENST00000409333 HCRTO43612 131 aa17.96■□□□□ 0.47
SSB-202ENST00000409333 HUS1O60921 280 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms