RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 CFLARO15519 480 aa8.79□□□□□ -1
SNX13-201ENST00000409076 KRT36O76013 467 aa8.79□□□□□ -1
SNX13-201ENST00000409076 INHBAP08476 426 aa8.79□□□□□ -1
SNX13-201ENST00000409076 CD48P09326 243 aa8.79□□□□□ -1
SNX13-201ENST00000409076 TMEM191BP0C7N4 346 aa8.79□□□□□ -1
SNX13-201ENST00000409076 ALDH1B1P30837 517 aa8.79□□□□□ -1
SNX13-201ENST00000409076 DSG3P32926 999 aa8.79□□□□□ -1
SNX13-201ENST00000409076 RFC5P40937 340 aa8.79□□□□□ -1
SNX13-201ENST00000409076 SARNPP82979 210 aaKnown RBP8.79□□□□□ -1
SNX13-201ENST00000409076 CDR2Q01850 454 aa8.79□□□□□ -1
SNX13-201ENST00000409076 BTKQ06187 659 aa8.79□□□□□ -1
SNX13-201ENST00000409076 SWT1Q5T5J6 900 aaKnown RBP8.79□□□□□ -1
SNX13-201ENST00000409076 MROH9Q5TGP6 573 aa8.79□□□□□ -1
SNX13-201ENST00000409076 OR6B2Q6IFH4 312 aa8.79□□□□□ -1
SNX13-201ENST00000409076 ACAD10Q6JQN1 1059 aa8.79□□□□□ -1
SNX13-201ENST00000409076 GPAT2Q6NUI2 795 aa8.79□□□□□ -1
SNX13-201ENST00000409076 RNF148Q8N7C7 305 aa8.79□□□□□ -1
SNX13-201ENST00000409076 ZNF317Q96PQ6 595 aaPredicted RBP8.79□□□□□ -1
SNX13-201ENST00000409076 POLR3CQ9BUI4 534 aaPredicted RBP8.79□□□□□ -1
SNX13-201ENST00000409076 PCMTD2Q9NV79 361 aa8.79□□□□□ -1
SNX13-201ENST00000409076 SLC17A6Q9P2U8 582 aa8.79□□□□□ -1
SNX13-201ENST00000409076 RIPK3Q9Y572 518 aa8.79□□□□□ -1
SNX13-201ENST00000409076 AFF2P51816 1311 aa8.79□□□□□ -1
SNX13-201ENST00000409076 IGLV3-22A0A075B6J6 115 aa8.78□□□□□ -1
SNX13-201ENST00000409076 DGKIO75912 1065 aa8.78□□□□□ -1
SNX13-201ENST00000409076 TROVE2P10155 538 aaKnown RBP eCLIP8.78□□□□□ -1
SNX13-201ENST00000409076 NCF2P19878 526 aaPredicted RBP8.78□□□□□ -1
SNX13-201ENST00000409076 SERPINB3P29508 390 aa8.78□□□□□ -1
SNX13-201ENST00000409076 ANKRD22Q5VYY1 191 aa8.78□□□□□ -1
SNX13-201ENST00000409076 NLRP9Q7RTR0 991 aa8.78□□□□□ -1
SNX13-201ENST00000409076 ARMC2Q8NEN0 867 aa8.78□□□□□ -1
SNX13-201ENST00000409076 SPDYE1Q8NFV5 336 aaPredicted RBP8.78□□□□□ -1
SNX13-201ENST00000409076 DONSONQ9NYP3 566 aa8.78□□□□□ -1
SNX13-201ENST00000409076 A0A1B0GUL6 1792 aa8.78□□□□□ -1
SNX13-201ENST00000409076 CLGNO14967 610 aa8.78□□□□□ -1
SNX13-201ENST00000409076 MAPK13O15264 365 aa8.78□□□□□ -1
SNX13-201ENST00000409076 ADSSP30520 456 aa8.78□□□□□ -1
SNX13-201ENST00000409076 CTCFP49711 727 aaPredicted RBP8.78□□□□□ -1
SNX13-201ENST00000409076 PSMC5P62195 406 aa8.78□□□□□ -1
SNX13-201ENST00000409076 THOC5Q13769 683 aaKnown RBP8.78□□□□□ -1
SNX13-201ENST00000409076 C16orf46Q6P387 395 aa8.78□□□□□ -1
SNX13-201ENST00000409076 POLNQ7Z5Q5 900 aa8.78□□□□□ -1
SNX13-201ENST00000409076 RASGEF1CQ8N431 466 aa8.78□□□□□ -1
SNX13-201ENST00000409076 FBXO36Q8NEA4 188 aa8.78□□□□□ -1
SNX13-201ENST00000409076 TCP10LQ8TDR4 215 aa8.78□□□□□ -1
SNX13-201ENST00000409076 TLCD1Q96CP7 247 aa8.78□□□□□ -1
SNX13-201ENST00000409076 THTPAQ9BU02 230 aa8.78□□□□□ -1
SNX13-201ENST00000409076 TRAIPQ9BWF2 469 aa8.78□□□□□ -1
SNX13-201ENST00000409076 RPAP3Q9H6T3 665 aaPredicted RBP8.78□□□□□ -1
SNX13-201ENST00000409076 TUFT1Q9NNX1 390 aa8.78□□□□□ -1
SNX13-201ENST00000409076 FAM49BQ9NUQ9 324 aa8.78□□□□□ -1
SNX13-201ENST00000409076 POLIQ9UNA4 740 aa8.78□□□□□ -1
SNX13-201ENST00000409076 CCDC88AQ3V6T2 1871 aa8.78□□□□□ -1
SNX13-201ENST00000409076 CITO14578 2027 aa8.78□□□□□ -1
SNX13-201ENST00000409076 LPXNO60711 386 aa8.78□□□□□ -1
SNX13-201ENST00000409076 CDH16O75309 829 aa8.78□□□□□ -1
SNX13-201ENST00000409076 APRTP07741 180 aa8.78□□□□□ -1
SNX13-201ENST00000409076 SERPINB6P35237 376 aa8.78□□□□□ -1
SNX13-201ENST00000409076 WDR4P57081 412 aaKnown RBP8.78□□□□□ -1
SNX13-201ENST00000409076 PSMC1P62191 440 aaKnown RBP8.78□□□□□ -1
SNX13-201ENST00000409076 OTUD4Q01804 1114 aaKnown RBP8.78□□□□□ -1
SNX13-201ENST00000409076 PRKCEQ02156 737 aa8.78□□□□□ -1
SNX13-201ENST00000409076 NFX1Q12986 1120 aaKnown RBP8.78□□□□□ -1
SNX13-201ENST00000409076 KRT81Q14533 505 aa8.78□□□□□ -1
SNX13-201ENST00000409076 WDR72Q3MJ13 1102 aa8.78□□□□□ -1
SNX13-201ENST00000409076 Q4G0T1 1027 aa8.78□□□□□ -1
SNX13-201ENST00000409076 RASIP1Q5U651 963 aa8.78□□□□□ -1
SNX13-201ENST00000409076 BZW1Q7L1Q6 419 aaKnown RBP8.78□□□□□ -1
SNX13-201ENST00000409076 NCAPG2Q86XI2 1143 aa8.78□□□□□ -1
SNX13-201ENST00000409076 CCDC125Q86Z20 511 aa8.78□□□□□ -1
SNX13-201ENST00000409076 ARID3BQ8IVW6 561 aaPredicted RBP8.78□□□□□ -1
SNX13-201ENST00000409076 SPNS2Q8IVW8 549 aa8.78□□□□□ -1
SNX13-201ENST00000409076 LMNTD2Q8IXW0 634 aa8.78□□□□□ -1
SNX13-201ENST00000409076 MCOLN2Q8IZK6 566 aa8.78□□□□□ -1
SNX13-201ENST00000409076 GRK7Q8WTQ7 553 aa8.78□□□□□ -1
SNX13-201ENST00000409076 MOCOSQ96EN8 888 aa8.78□□□□□ -1
SNX13-201ENST00000409076 ZNF570Q96NI8 536 aa8.78□□□□□ -1
SNX13-201ENST00000409076 AGAP3Q96P47 875 aa8.78□□□□□ -1
SNX13-201ENST00000409076 OLFML3Q9NRN5 406 aa8.78□□□□□ -1
SNX13-201ENST00000409076 BCL9LQ86UU0 1499 aa8.78□□□□□ -1
SNX13-201ENST00000409076 SPDYE5A6NIY4 337 aa8.77□□□□□ -1
SNX13-201ENST00000409076 WDR64B1ANS9 1081 aa8.77□□□□□ -1
SNX13-201ENST00000409076 NEMP1O14524 444 aa8.77□□□□□ -1
SNX13-201ENST00000409076 CYB561D2O14569 222 aa8.77□□□□□ -1
SNX13-201ENST00000409076 HAUS5O94927 633 aa8.77□□□□□ -1
SNX13-201ENST00000409076 EGFRP00533 1210 aa8.77□□□□□ -1
SNX13-201ENST00000409076 NPR1P16066 1061 aa8.77□□□□□ -1
SNX13-201ENST00000409076 TCN1P20061 433 aaPredicted RBP8.77□□□□□ -1
SNX13-201ENST00000409076 CYP3A7P24462 503 aa8.77□□□□□ -1
SNX13-201ENST00000409076 GTF2A2P52657 109 aa8.77□□□□□ -1
SNX13-201ENST00000409076 PGGT1BP53609 377 aa8.77□□□□□ -1
SNX13-201ENST00000409076 GDF10P55107 478 aa8.77□□□□□ -1
SNX13-201ENST00000409076 MYL6P60660 151 aa8.77□□□□□ -1
SNX13-201ENST00000409076 KPNB1Q14974 876 aaKnown RBP8.77□□□□□ -1
SNX13-201ENST00000409076 RAB6CQ53S08 254 aa8.77□□□□□ -1
SNX13-201ENST00000409076 ZNF572Q7Z3I7 529 aaPredicted RBP8.77□□□□□ -1
SNX13-201ENST00000409076 ALYREFQ86V81 257 aaKnown RBP8.77□□□□□ -1
SNX13-201ENST00000409076 RHOT1Q8IXI2 618 aa8.77□□□□□ -1
SNX13-201ENST00000409076 GPD1LQ8N335 351 aa8.77□□□□□ -1
SNX13-201ENST00000409076 ACTL9Q8TC94 416 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms