RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 CDC23Q9UJX2 597 aa10.47□□□□□ -0.73
POLR1A-202ENST00000409024 IPPQ9Y573 584 aa10.47□□□□□ -0.73
POLR1A-202ENST00000409024 BDP1A6H8Y1 2624 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 A0A0U1RQJ8 604 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 MACROD2A1Z1Q3 448 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 CES2O00748 559 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 RIOK3O14730 519 aaKnown RBP10.46□□□□□ -0.73
POLR1A-202ENST00000409024 TLR3O15455 904 aaKnown RBP10.46□□□□□ -0.73
POLR1A-202ENST00000409024 MED7O43513 233 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 RECQL4O94761 1208 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 MTA2O94776 668 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 PARNO95453 639 aaKnown RBP10.46□□□□□ -0.73
POLR1A-202ENST00000409024 ABL1P00519 1130 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 FTLP02792 175 aaPredicted RBP10.46□□□□□ -0.73
POLR1A-202ENST00000409024 CYP1A1P04798 512 aaPredicted RBP10.46□□□□□ -0.73
POLR1A-202ENST00000409024 KRT19P08727 400 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 TCP1P17987 556 aaKnown RBP10.46□□□□□ -0.73
POLR1A-202ENST00000409024 LRPAP1P30533 357 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 GNA15P30679 374 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 ASPAP45381 313 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 CDK7P50613 346 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 DSC3Q14574 896 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 STILQ15468 1287 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 CLEC16AQ2KHT3 1053 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 SPOPLQ6IQ16 392 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 TMEM270Q6UE05 265 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 DPH6Q7L8W6 267 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 CEP112Q8N8E3 955 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 RBBP8NLQ8NC74 664 aaPredicted RBP10.46□□□□□ -0.73
POLR1A-202ENST00000409024 SMG8Q8ND04 991 aaKnown RBP10.46□□□□□ -0.73
POLR1A-202ENST00000409024 ATRIPQ8WXE1 791 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 MYLIPQ8WY64 445 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 PGBD4Q96DM1 585 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 HPDLQ96IR7 371 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 RPGRIP1Q96KN7 1286 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 ZNF560Q96MR9 790 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 AVENQ9NQS1 362 aaPredicted RBP10.46□□□□□ -0.73
POLR1A-202ENST00000409024 CISHQ9NSE2 258 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 FAM105AQ9NUU6 356 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 UVRAGQ9P2Y5 699 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 TRIM10Q9UDY6 481 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 OGDHLQ9ULD0 1010 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 PCDHGC3Q9UN70 934 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 AGAP1Q9UPQ3 857 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 MRFAP1Q9Y605 127 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 DUSP10Q9Y6W6 482 aa10.46□□□□□ -0.73
POLR1A-202ENST00000409024 ANK1P16157 1881 aa10.46□□□□□ -0.74
POLR1A-202ENST00000409024 A0A0U1RQF3 1178 aa10.45□□□□□ -0.74
POLR1A-202ENST00000409024 SMIM28A0A1B0GU29 152 aa10.45□□□□□ -0.74
POLR1A-202ENST00000409024 PIRO00625 290 aa10.45□□□□□ -0.74
POLR1A-202ENST00000409024 CTIFO43310 598 aaKnown RBP10.45□□□□□ -0.74
POLR1A-202ENST00000409024 MYCNP04198 464 aaPredicted RBP10.45□□□□□ -0.74
POLR1A-202ENST00000409024 MMEP08473 750 aa10.45□□□□□ -0.74
POLR1A-202ENST00000409024 COL6A1P12109 1028 aa10.45□□□□□ -0.74
POLR1A-202ENST00000409024 UNGP13051 313 aaPredicted RBP10.45□□□□□ -0.74
POLR1A-202ENST00000409024 ITGA4P13612 1032 aa10.45□□□□□ -0.74
POLR1A-202ENST00000409024 FOSL2P15408 326 aa10.45□□□□□ -0.74
POLR1A-202ENST00000409024 POLR2BP30876 1174 aaKnown RBP10.45□□□□□ -0.74
POLR1A-202ENST00000409024 CDH5P33151 784 aaPredicted RBP10.45□□□□□ -0.74
POLR1A-202ENST00000409024 NAP1L1P55209 391 aaKnown RBP10.45□□□□□ -0.74
POLR1A-202ENST00000409024 TNNC1P63316 161 aa10.45□□□□□ -0.74
POLR1A-202ENST00000409024 AMPD2Q01433 879 aa10.45□□□□□ -0.74
POLR1A-202ENST00000409024 CENPCQ03188 943 aa10.45□□□□□ -0.74
POLR1A-202ENST00000409024 INCA1Q0VD86 236 aa10.45□□□□□ -0.74
POLR1A-202ENST00000409024 PAK2Q13177 524 aa10.45□□□□□ -0.74
POLR1A-202ENST00000409024 BFSP2Q13515 415 aa10.45□□□□□ -0.74
POLR1A-202ENST00000409024 WDR72Q3MJ13 1102 aa10.45□□□□□ -0.74
POLR1A-202ENST00000409024 SLFN11Q7Z7L1 901 aa10.45□□□□□ -0.74
POLR1A-202ENST00000409024 UNC93AQ86WB7 457 aa10.45□□□□□ -0.74
POLR1A-202ENST00000409024 MNS1Q8NEH6 495 aa10.45□□□□□ -0.74
POLR1A-202ENST00000409024 SLC20A1Q8WUM9 679 aa10.45□□□□□ -0.74
POLR1A-202ENST00000409024 RSPH1Q8WYR4 309 aa10.45□□□□□ -0.74
POLR1A-202ENST00000409024 FTHL17Q9BXU8 183 aa10.45□□□□□ -0.74
POLR1A-202ENST00000409024 LHX5Q9H2C1 402 aa10.45□□□□□ -0.74
POLR1A-202ENST00000409024 NXF3Q9H4D5 531 aaKnown RBP10.45□□□□□ -0.74
POLR1A-202ENST00000409024 SEPT11Q9NVA2 429 aaKnown RBP10.45□□□□□ -0.74
POLR1A-202ENST00000409024 RNF216Q9NWF9 866 aaPredicted RBP10.45□□□□□ -0.74
POLR1A-202ENST00000409024 GDAP2Q9NXN4 497 aa10.45□□□□□ -0.74
POLR1A-202ENST00000409024 PARP2Q9UGN5 583 aa10.45□□□□□ -0.74
POLR1A-202ENST00000409024 GTF3C4Q9UKN8 822 aa10.45□□□□□ -0.74
POLR1A-202ENST00000409024 CEP83Q9Y592 693 aa10.45□□□□□ -0.74
POLR1A-202ENST00000409024 SAR1BQ9Y6B6 198 aa10.45□□□□□ -0.74
POLR1A-202ENST00000409024 TRIP12Q14669 1992 aaPredicted RBP10.45□□□□□ -0.74
POLR1A-202ENST00000409024 INPPL1O15357 1258 aa10.44□□□□□ -0.74
POLR1A-202ENST00000409024 CILPO75339 1184 aa10.44□□□□□ -0.74
POLR1A-202ENST00000409024 MOCS3O95396 460 aa10.44□□□□□ -0.74
POLR1A-202ENST00000409024 EOMESO95936 686 aa10.44□□□□□ -0.74
POLR1A-202ENST00000409024 CYP1A2P05177 515 aa10.44□□□□□ -0.74
POLR1A-202ENST00000409024 CKBP12277 381 aa10.44□□□□□ -0.74
POLR1A-202ENST00000409024 RPL9P32969 192 aaKnown RBP10.44□□□□□ -0.74
POLR1A-202ENST00000409024 NOP2P46087 812 aaKnown RBP10.44□□□□□ -0.74
POLR1A-202ENST00000409024 C1QBPQ07021 282 aaKnown RBP10.44□□□□□ -0.74
POLR1A-202ENST00000409024 CKAP4Q07065 602 aaKnown RBP10.44□□□□□ -0.74
POLR1A-202ENST00000409024 NFX1Q12986 1120 aaKnown RBP10.44□□□□□ -0.74
POLR1A-202ENST00000409024 LPIN1Q14693 890 aa10.44□□□□□ -0.74
POLR1A-202ENST00000409024 CLUL1Q15846 466 aa10.44□□□□□ -0.74
POLR1A-202ENST00000409024 SV2CQ496J9 727 aa10.44□□□□□ -0.74
POLR1A-202ENST00000409024 LIN9Q5TKA1 542 aa10.44□□□□□ -0.74
POLR1A-202ENST00000409024 C9orf57Q5W0N0 161 aa10.44□□□□□ -0.74
POLR1A-202ENST00000409024 PHF13Q86YI8 300 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms