RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 EIF3DO15371 548 aaKnown RBP eCLIP13.89□□□□□ -0.19
SNORD88B-201ENST00000408454 LAMTOR5O43504 91 aa13.89□□□□□ -0.19
SNORD88B-201ENST00000408454 CUTAO60888 179 aa13.89□□□□□ -0.19
SNORD88B-201ENST00000408454 N4BP1O75113 896 aaKnown RBP13.89□□□□□ -0.19
SNORD88B-201ENST00000408454 CYP11A1P05108 521 aa13.89□□□□□ -0.19
SNORD88B-201ENST00000408454 TMEM191BP0C7N4 346 aa13.89□□□□□ -0.19
SNORD88B-201ENST00000408454 PSMC3P17980 439 aa13.89□□□□□ -0.19
SNORD88B-201ENST00000408454 DDX6P26196 483 aaKnown RBP eCLIP13.89□□□□□ -0.19
SNORD88B-201ENST00000408454 PCSK1P29120 753 aa13.89□□□□□ -0.19
SNORD88B-201ENST00000408454 PDE6CP51160 858 aa13.89□□□□□ -0.19
SNORD88B-201ENST00000408454 EPHA5P54756 1037 aa13.89□□□□□ -0.19
SNORD88B-201ENST00000408454 NRLP54845 237 aa13.89□□□□□ -0.19
SNORD88B-201ENST00000408454 PLCB2Q00722 1185 aa13.89□□□□□ -0.19
SNORD88B-201ENST00000408454 TWF1Q12792 350 aa13.89□□□□□ -0.19
SNORD88B-201ENST00000408454 ANGPT1Q15389 498 aa13.89□□□□□ -0.19
SNORD88B-201ENST00000408454 MAPRE1Q15691 268 aaKnown RBP13.89□□□□□ -0.19
SNORD88B-201ENST00000408454 C9orf57Q5W0N0 161 aa13.89□□□□□ -0.19
SNORD88B-201ENST00000408454 CWF19L1Q69YN2 538 aaKnown RBP13.89□□□□□ -0.19
SNORD88B-201ENST00000408454 JADE1Q6IE81 842 aa13.89□□□□□ -0.19
SNORD88B-201ENST00000408454 PJA1Q8NG27 643 aa13.89□□□□□ -0.19
SNORD88B-201ENST00000408454 GOLGA5Q8TBA6 731 aa13.89□□□□□ -0.19
SNORD88B-201ENST00000408454 CSGALNACT1Q8TDX6 532 aa13.89□□□□□ -0.19
SNORD88B-201ENST00000408454 EPSTI1Q96J88 318 aa13.89□□□□□ -0.19
SNORD88B-201ENST00000408454 SENP8Q96LD8 212 aa13.89□□□□□ -0.19
SNORD88B-201ENST00000408454 OBP2AQ9NY56 170 aa13.89□□□□□ -0.19
SNORD88B-201ENST00000408454 RBAKQ9NYW8 714 aaPredicted RBP13.89□□□□□ -0.19
SNORD88B-201ENST00000408454 FBXO4Q9UKT5 387 aa13.89□□□□□ -0.19
SNORD88B-201ENST00000408454 YIPF1Q9Y548 306 aa13.89□□□□□ -0.19
SNORD88B-201ENST00000408454 CLIC4Q9Y696 253 aa13.89□□□□□ -0.19
SNORD88B-201ENST00000408454 ZNF318Q5VUA4 2279 aa13.89□□□□□ -0.19
SNORD88B-201ENST00000408454 KMT2EQ8IZD2 1858 aa13.89□□□□□ -0.19
SNORD88B-201ENST00000408454 ZNF263O14978 683 aa13.88□□□□□ -0.19
SNORD88B-201ENST00000408454 ADAM12O43184 909 aa13.88□□□□□ -0.19
SNORD88B-201ENST00000408454 EXTL3O43909 919 aa13.88□□□□□ -0.19
SNORD88B-201ENST00000408454 PDGFBP01127 241 aaPredicted RBP13.88□□□□□ -0.19
SNORD88B-201ENST00000408454 TNNC2P02585 160 aa13.88□□□□□ -0.19
SNORD88B-201ENST00000408454 NMT1P30419 496 aaKnown RBP13.88□□□□□ -0.19
SNORD88B-201ENST00000408454 RPS9P46781 194 aaKnown RBP13.88□□□□□ -0.19
SNORD88B-201ENST00000408454 RPL10AP62906 217 aaKnown RBP13.88□□□□□ -0.19
SNORD88B-201ENST00000408454 CEBPZQ03701 1054 aaKnown RBP13.88□□□□□ -0.19
SNORD88B-201ENST00000408454 LRRC32Q14392 662 aa13.88□□□□□ -0.19
SNORD88B-201ENST00000408454 ZNF528Q3MIS6 628 aa13.88□□□□□ -0.19
SNORD88B-201ENST00000408454 SEZ6Q53EL9 994 aa13.88□□□□□ -0.19
SNORD88B-201ENST00000408454 SLC44A4Q53GD3 710 aa13.88□□□□□ -0.19
SNORD88B-201ENST00000408454 PARM1Q6UWI2 310 aa13.88□□□□□ -0.19
SNORD88B-201ENST00000408454 DPH6Q7L8W6 267 aa13.88□□□□□ -0.19
SNORD88B-201ENST00000408454 GPR161Q8N6U8 529 aaKnown RBP13.88□□□□□ -0.19
SNORD88B-201ENST00000408454 FGF14Q92915 247 aa13.88□□□□□ -0.19
SNORD88B-201ENST00000408454 MCRS1Q96EZ8 462 aa13.88□□□□□ -0.19
SNORD88B-201ENST00000408454 CEP295NLQ96MC4 621 aa13.88□□□□□ -0.19
SNORD88B-201ENST00000408454 TRPV4Q9HBA0 871 aa13.88□□□□□ -0.19
SNORD88B-201ENST00000408454 C2orf16Q68DN1 1984 aa13.88□□□□□ -0.19
SNORD88B-201ENST00000408454 PIEZO1Q92508 2521 aa13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 ANO9A1A5B4 782 aa13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 ZNF233A6NK53 670 aa13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 KPNA7A9QM74 516 aa13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 PIRO00625 290 aa13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 CYB561D2O14569 222 aa13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 SPTLC1O15269 473 aa13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 NARSO43776 548 aaKnown RBP13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 MYL1P05976 194 aa13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 MYL4P12829 197 aa13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 TNFSF9P41273 254 aa13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 LHX1P48742 406 aa13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 ACOT2P49753 483 aa13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 GPC5P78333 572 aa13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 RBP5P82980 135 aa13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 TFAMQ00059 246 aaKnown RBP13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 FOXK2Q01167 660 aa13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 UBXN2BQ14CS0 331 aa13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 ARHGAP29Q52LW3 1261 aa13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 CD300LGQ6UXG3 332 aa13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 C1orf210Q8IVY1 113 aa13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 BRSK2Q8IWQ3 736 aa13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 CEP57L1Q8IYX8 460 aa13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 GPD1LQ8N335 351 aa13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 CCDC26Q8TAB7 109 aa13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 ITFG1Q8TB96 612 aa13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 RSAD2Q8WXG1 361 aa13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 C8orf33Q9H7E9 229 aaPredicted RBP13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 KIF9Q9HAQ2 790 aa13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 ABCB6Q9NP58 842 aa13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 TBC1D7Q9P0N9 293 aa13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 USP25Q9UHP3 1055 aa13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 MTMR6Q9Y217 621 aa13.87□□□□□ -0.19
SNORD88B-201ENST00000408454 FAM189A1O60320 539 aa13.86□□□□□ -0.19
SNORD88B-201ENST00000408454 KINO60870 393 aaKnown RBP13.86□□□□□ -0.19
SNORD88B-201ENST00000408454 CSH1P0DML2 217 aa13.86□□□□□ -0.19
SNORD88B-201ENST00000408454 CSH2P0DML3 217 aa13.86□□□□□ -0.19
SNORD88B-201ENST00000408454 NPR3P17342 541 aa13.86□□□□□ -0.19
SNORD88B-201ENST00000408454 SDHBP21912 280 aa13.86□□□□□ -0.19
SNORD88B-201ENST00000408454 WEE1P30291 646 aa13.86□□□□□ -0.19
SNORD88B-201ENST00000408454 NTHL1P78549 312 aa13.86□□□□□ -0.19
SNORD88B-201ENST00000408454 MGAT5BQ3V5L5 792 aa13.86□□□□□ -0.19
SNORD88B-201ENST00000408454 CENPPQ6IPU0 288 aa13.86□□□□□ -0.19
SNORD88B-201ENST00000408454 C4orf50Q6ZRC1 276 aa13.86□□□□□ -0.19
SNORD88B-201ENST00000408454 FSIP1Q8NA03 581 aa13.86□□□□□ -0.19
SNORD88B-201ENST00000408454 LINC00301Q8NCQ3 95 aa13.86□□□□□ -0.19
SNORD88B-201ENST00000408454 ING5Q8WYH8 240 aa13.86□□□□□ -0.19
SNORD88B-201ENST00000408454 PSMG2Q969U7 264 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms