RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 ANKRD20A12PQ8NF67 263 aa31.51■■■□□ 2.63
USP42-202ENST00000404008 RIN2Q8WYP3 895 aaPredicted RBP31.51■■■□□ 2.63
USP42-202ENST00000404008 ELMO3Q96BJ8 720 aa31.51■■■□□ 2.63
USP42-202ENST00000404008 IMPG2Q9BZV3 1241 aa31.51■■■□□ 2.63
USP42-202ENST00000404008 MRPL17Q9NRX2 175 aaKnown RBP31.51■■■□□ 2.63
USP42-202ENST00000404008 IRAK3Q9Y616 596 aa31.51■■■□□ 2.63
USP42-202ENST00000404008 C2CD2LO14523 706 aa31.5■■■□□ 2.63
USP42-202ENST00000404008 LILRB3O75022 631 aa31.5■■■□□ 2.63
USP42-202ENST00000404008 CXCL14O95715 111 aa31.5■■■□□ 2.63
USP42-202ENST00000404008 CYP11A1P05108 521 aa31.5■■■□□ 2.63
USP42-202ENST00000404008 TYMPP19971 482 aa31.5■■■□□ 2.63
USP42-202ENST00000404008 CETN1Q12798 172 aa31.5■■■□□ 2.63
USP42-202ENST00000404008 VARS2Q5ST30 1063 aaKnown RBP31.5■■■□□ 2.63
USP42-202ENST00000404008 MICAL1Q8TDZ2 1067 aa31.5■■■□□ 2.63
USP42-202ENST00000404008 PIK3R5Q8WYR1 880 aa31.5■■■□□ 2.63
USP42-202ENST00000404008 GUCD1Q96NT3 240 aa31.5■■■□□ 2.63
USP42-202ENST00000404008 CDX2Q99626 313 aaPredicted RBP31.5■■■□□ 2.63
USP42-202ENST00000404008 MTMR10Q9NXD2 777 aa31.5■■■□□ 2.63
USP42-202ENST00000404008 SSX2IPQ9Y2D8 614 aa31.5■■■□□ 2.63
USP42-202ENST00000404008 TIMM13Q9Y5L4 95 aaPredicted RBP31.5■■■□□ 2.63
USP42-202ENST00000404008 GOLGA6L19H0YKK7 550 aa31.49■■■□□ 2.63
USP42-202ENST00000404008 HUS1O60921 280 aa31.49■■■□□ 2.63
USP42-202ENST00000404008 CLSTN1O94985 981 aa31.49■■■□□ 2.63
USP42-202ENST00000404008 TNNC1P63316 161 aa31.49■■■□□ 2.63
USP42-202ENST00000404008 NOP14P78316 857 aaKnown RBP31.49■■■□□ 2.63
USP42-202ENST00000404008 ZNF667Q5HYK9 610 aa31.49■■■□□ 2.63
USP42-202ENST00000404008 SPOPLQ6IQ16 392 aa31.49■■■□□ 2.63
USP42-202ENST00000404008 APTXQ7Z2E3 356 aaKnown RBP31.49■■■□□ 2.63
USP42-202ENST00000404008 LIMS2Q7Z4I7 341 aa31.49■■■□□ 2.63
USP42-202ENST00000404008 TOP6BLQ8N6T0 577 aa31.49■■■□□ 2.63
USP42-202ENST00000404008 MRPL43Q8N983 215 aaKnown RBP31.49■■■□□ 2.63
USP42-202ENST00000404008 CCDC150Q8NCX0 1101 aa31.49■■■□□ 2.63
USP42-202ENST00000404008 LNX1Q8TBB1 728 aaPredicted RBP31.49■■■□□ 2.63
USP42-202ENST00000404008 GAS2L1Q99501 681 aaPredicted RBP31.49■■■□□ 2.63
USP42-202ENST00000404008 UTP3Q9NQZ2 479 aaKnown RBP eCLIP31.49■■■□□ 2.636e-8■■■■■ 55.9
USP42-202ENST00000404008 NXF1Q9UBU9 619 aaKnown RBP31.49■■■□□ 2.63
USP42-202ENST00000404008 DSEQ9UL01 958 aa31.49■■■□□ 2.63
USP42-202ENST00000404008 L1RE1Q9UN81 338 aa31.49■■■□□ 2.63
USP42-202ENST00000404008 MTCH2Q9Y6C9 303 aa31.49■■■□□ 2.63
USP42-202ENST00000404008 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP31.48■■■□□ 2.63
USP42-202ENST00000404008 C2orf71A6NGG8 1288 aa31.48■■■□□ 2.63
USP42-202ENST00000404008 LRRC10BA6NIK2 292 aa31.48■■■□□ 2.63
USP42-202ENST00000404008 HIDE1A8MVS5 230 aa31.48■■■□□ 2.63
USP42-202ENST00000404008 TPM4P67936 248 aa31.48■■■□□ 2.63
USP42-202ENST00000404008 MRPL58Q14197 206 aaKnown RBP31.48■■■□□ 2.63
USP42-202ENST00000404008 SOWAHAQ2M3V2 549 aa31.48■■■□□ 2.63
USP42-202ENST00000404008 PDXDC1Q6P996 788 aa31.48■■■□□ 2.63
USP42-202ENST00000404008 PRSS55Q6UWB4 352 aaPredicted RBP31.48■■■□□ 2.63
USP42-202ENST00000404008 PDCL2Q8N4E4 241 aa31.48■■■□□ 2.63
USP42-202ENST00000404008 LMO3Q8TAP4 145 aa31.48■■■□□ 2.63
USP42-202ENST00000404008 VPS16Q9H269 839 aa31.48■■■□□ 2.63
USP42-202ENST00000404008 APOBEC3GQ9HC16 384 aaKnown RBP31.48■■■□□ 2.63
USP42-202ENST00000404008 POLIQ9UNA4 740 aa31.48■■■□□ 2.63
USP42-202ENST00000404008 GTPBP10A4D1E9 387 aaKnown RBP31.47■■■□□ 2.63
USP42-202ENST00000404008 TPM2P07951 284 aa31.47■■■□□ 2.63
USP42-202ENST00000404008 COPB1P53618 953 aaKnown RBP31.47■■■□□ 2.63
USP42-202ENST00000404008 YWHAHQ04917 246 aaPredicted RBP31.47■■■□□ 2.63
USP42-202ENST00000404008 WSCD1Q658N2 575 aa31.47■■■□□ 2.63
USP42-202ENST00000404008 ANKS3Q6ZW76 656 aa31.47■■■□□ 2.63
USP42-202ENST00000404008 DPH6Q7L8W6 267 aa31.47■■■□□ 2.63
USP42-202ENST00000404008 MYLIPQ8WY64 445 aa31.47■■■□□ 2.63
USP42-202ENST00000404008 MMS19Q96T76 1030 aa31.47■■■□□ 2.63
USP42-202ENST00000404008 ANP32EQ9BTT0 268 aa31.47■■■□□ 2.63
USP42-202ENST00000404008 OAZ2O95190 189 aa31.46■■■□□ 2.63
USP42-202ENST00000404008 P4HA1P13674 534 aa31.46■■■□□ 2.63
USP42-202ENST00000404008 CA8P35219 290 aa31.46■■■□□ 2.63
USP42-202ENST00000404008 PSMD5Q16401 504 aa31.46■■■□□ 2.63
USP42-202ENST00000404008 WDR44Q5JSH3 913 aa31.46■■■□□ 2.63
USP42-202ENST00000404008 OVOS1Q6IE37 1185 aa31.46■■■□□ 2.63
USP42-202ENST00000404008 TMEM86AQ8N2M4 240 aa31.46■■■□□ 2.63
USP42-202ENST00000404008 RXFP1Q9HBX9 757 aa31.46■■■□□ 2.63
USP42-202ENST00000404008 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP31.46■■■□□ 2.63
USP42-202ENST00000404008 GCNT4Q9P109 453 aa31.46■■■□□ 2.63
USP42-202ENST00000404008 MTRRQ9UBK8 725 aa31.46■■■□□ 2.63
USP42-202ENST00000404008 EYSQ5T1H1 3165 aa31.45■■■□□ 2.63
USP42-202ENST00000404008 PES1O00541 588 aaKnown RBP31.45■■■□□ 2.63
USP42-202ENST00000404008 IGFBP4P22692 258 aa31.45■■■□□ 2.63
USP42-202ENST00000404008 CREMQ03060 361 aa31.45■■■□□ 2.63
USP42-202ENST00000404008 METTL23Q86XA0 190 aa31.45■■■□□ 2.63
USP42-202ENST00000404008 EHBP1Q8NDI1 1231 aa31.45■■■□□ 2.63
USP42-202ENST00000404008 MYO7AQ13402 2215 aa31.45■■■□□ 2.63
USP42-202ENST00000404008 ASPAP45381 313 aa31.44■■■□□ 2.62
USP42-202ENST00000404008 GBP6Q6ZN66 633 aa31.44■■■□□ 2.62
USP42-202ENST00000404008 ADGRF2Q8IZF7 708 aa31.44■■■□□ 2.62
USP42-202ENST00000404008 RNF214Q8ND24 703 aa31.44■■■□□ 2.62
USP42-202ENST00000404008 SPATA18Q8TC71 538 aa31.44■■■□□ 2.62
USP42-202ENST00000404008 CRACR2AQ9BSW2 395 aa31.44■■■□□ 2.62
USP42-202ENST00000404008 NIF3L1Q9GZT8 377 aa31.44■■■□□ 2.62
USP42-202ENST00000404008 INTS2Q9H0H0 1204 aaKnown RBP31.44■■■□□ 2.62
USP42-202ENST00000404008 NSUN3Q9H649 340 aaKnown RBP31.44■■■□□ 2.62
USP42-202ENST00000404008 FNIP2Q9P278 1114 aa31.44■■■□□ 2.62
USP42-202ENST00000404008 BACE2Q9Y5Z0 518 aa31.44■■■□□ 2.62
USP42-202ENST00000404008 PRRC2BQ5JSZ5 2229 aaKnown RBP31.44■■■□□ 2.62
USP42-202ENST00000404008 H7C4K7 107 aa31.43■■■□□ 2.62
USP42-202ENST00000404008 TBC1D4O60343 1298 aa31.43■■■□□ 2.62
USP42-202ENST00000404008 CNPP09543 421 aaKnown RBP31.43■■■□□ 2.62
USP42-202ENST00000404008 ZNF280DQ6N043 979 aa31.43■■■□□ 2.62
USP42-202ENST00000404008 SCARA5Q6ZMJ2 495 aa31.43■■■□□ 2.62
USP42-202ENST00000404008 ADGRD2Q7Z7M1 963 aa31.43■■■□□ 2.62
USP42-202ENST00000404008 KBTBD7Q8WVZ9 684 aa31.43■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms