RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 LIN7AO14910 233 aaPredicted RBP10.04□□□□□ -0.8
SMAD9-203ENST00000399275 FLT3P36888 993 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 GALK1P51570 392 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 RHAGQ02094 409 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 SNX30Q5VWJ9 437 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 KRT39Q6A163 491 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 RASSF6Q6ZTQ3 369 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 FRMD5Q7Z6J6 570 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 DGCR14Q96DF8 476 aaKnown RBP10.04□□□□□ -0.8
SMAD9-203ENST00000399275 OTUD5Q96G74 571 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 AIPL1Q9NZN9 384 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 CTNNAL1Q9UBT7 734 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 PLAGL2Q9UPG8 496 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 ABCB11O95342 1321 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 CLIC2O15247 247 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 DYNLL1P63167 89 aaKnown RBP10.04□□□□□ -0.8
SMAD9-203ENST00000399275 DDR1Q08345 913 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 ATG9AQ7Z3C6 839 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 KBTBD2Q8IY47 623 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 PIGSQ96S52 555 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 GINM1Q9NU53 330 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 TTLL3Q9Y4R7 772 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 MROH2AA6NES4 1674 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 ARHGEF37A1IGU5 675 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 GNPATO15228 680 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 ALBP02768 609 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 ENO2P09104 434 aaPredicted RBP10.03□□□□□ -0.8
SMAD9-203ENST00000399275 FOXO4P98177 505 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 MTA1Q13330 715 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 COG2Q14746 738 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 MDH1BQ5I0G3 518 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 CDAN1Q8IWY9 1227 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 FUKQ8N0W3 1084 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 TEKT3Q9BXF9 490 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 PCDH12Q9NPG4 1184 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 METTL5Q9NRN9 209 aaKnown RBP10.03□□□□□ -0.8
SMAD9-203ENST00000399275 FBXO28Q9NVF7 368 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 TRNAU1APQ9NX07 287 aaKnown RBP10.03□□□□□ -0.8
SMAD9-203ENST00000399275 TRMT6Q9UJA5 497 aaKnown RBP10.03□□□□□ -0.8
SMAD9-203ENST00000399275 SMIM31A0A1B0GVY4 71 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 KRT1P04264 644 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 TNFRSF8P28908 595 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 USP11P51784 963 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 CACNB1Q02641 598 aaPredicted RBP10.03□□□□□ -0.8
SMAD9-203ENST00000399275 RBM12BQ8IXT5 1001 aaKnown RBP10.03□□□□□ -0.8
SMAD9-203ENST00000399275 GRPEL2Q8TAA5 225 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 ZC3H12CQ9C0D7 883 aaKnown RBP10.03□□□□□ -0.8
SMAD9-203ENST00000399275 PKD2L1Q9P0L9 805 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 CIDEBQ9UHD4 219 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 DDX20Q9UHI6 824 aaKnown RBP10.03□□□□□ -0.8
SMAD9-203ENST00000399275 PIPSLA2A3N6 862 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 GOLGA8SH3BPF8 625 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 MSR1P21757 451 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 TNFAIP2Q03169 654 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 MCL1Q07820 350 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 USH1GQ495M9 461 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 UTS2BQ765I0 119 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 PACSIN1Q9BY11 444 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 NPHS2Q9NP85 383 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 TRPV5Q9NQA5 729 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 ZSCAN9O15535 394 aaPredicted RBP10.03□□□□□ -0.8
SMAD9-203ENST00000399275 B3GALNT1O75752 331 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 IFNA16P05015 189 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 FCER1AP12319 257 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 ITGAXP20702 1163 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 SFNP31947 248 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 QARSP47897 775 aaKnown RBP10.03□□□□□ -0.8
SMAD9-203ENST00000399275 ARL4CP56559 192 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 PDIK1LQ8N165 341 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 RBM17Q96I25 401 aaKnown RBP10.03□□□□□ -0.8
SMAD9-203ENST00000399275 ZBTB18Q99592 522 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 SMARCAL1Q9NZC9 954 aa10.03□□□□□ -0.8
SMAD9-203ENST00000399275 KPNA7A9QM74 516 aa10.02□□□□□ -0.8
SMAD9-203ENST00000399275 F8W810 466 aa10.02□□□□□ -0.8
SMAD9-203ENST00000399275 CDH16O75309 829 aa10.02□□□□□ -0.8
SMAD9-203ENST00000399275 NR3C1P04150 777 aa10.02□□□□□ -0.8
SMAD9-203ENST00000399275 FGFR4P22455 802 aa10.02□□□□□ -0.8
SMAD9-203ENST00000399275 SARSP49591 514 aaKnown RBP10.02□□□□□ -0.8
SMAD9-203ENST00000399275 RPS8P62241 208 aaKnown RBP10.02□□□□□ -0.8
SMAD9-203ENST00000399275 TRAF2Q12933 501 aa10.02□□□□□ -0.8
SMAD9-203ENST00000399275 TTBK2Q6IQ55 1244 aa10.02□□□□□ -0.8
SMAD9-203ENST00000399275 C16orf89Q6UX73 402 aa10.02□□□□□ -0.8
SMAD9-203ENST00000399275 RBM46Q8TBY0 533 aaKnown RBP10.02□□□□□ -0.8
SMAD9-203ENST00000399275 ANKS1AQ92625 1134 aa10.02□□□□□ -0.8
SMAD9-203ENST00000399275 ZNF512BQ96KM6 892 aaPredicted RBP10.02□□□□□ -0.8
SMAD9-203ENST00000399275 USE1Q9NZ43 259 aa10.02□□□□□ -0.8
SMAD9-203ENST00000399275 UFL1O94874 794 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 TJP3O95049 919 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 ITIH2P19823 946 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 PSEN1P49768 467 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 DGUOKQ16854 277 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 PERM1Q5SV97 790 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 P3H2Q8IVL5 708 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 ERP44Q9BS26 406 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 ACAT2Q9BWD1 397 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 ELOVL6Q9H5J4 265 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 GGA1Q9UJY5 639 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 GSG1L2A8MUP6 293 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 ZNF862O60290 1169 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 USP1O94782 785 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms