RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 SPACA7Q96KW9 195 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 WDR24Q96S15 920 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 CCT7Q99832 543 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 LRRC1Q9BTT6 524 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 SLC40A1Q9NP59 571 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 TTC37Q6PGP7 1564 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 IKBKBO14920 756 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 CASP4P49662 377 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 ARSEP51690 589 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 DDX39BQ13838 428 aaKnown RBP9.78□□□□□ -0.84
ATL3-201ENST00000398868 POP1Q99575 1024 aaKnown RBP9.78□□□□□ -0.84
ATL3-201ENST00000398868 NFKBIZQ9BYH8 718 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 TMEM117Q9H0C3 514 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 EPN3Q9H201 632 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 CUEDC2Q9H467 287 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 RUBCNLQ9H714 662 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.78□□□□□ -0.84
ATL3-201ENST00000398868 ZCCHC11Q5TAX3 1644 aaKnown RBP9.78□□□□□ -0.84
ATL3-201ENST00000398868 DEAF1O75398 565 aaPredicted RBP9.78□□□□□ -0.84
ATL3-201ENST00000398868 FGFR1P11362 822 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 SLC16A1P53985 500 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 NME5P56597 212 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 EIF3EP60228 445 aaKnown RBP9.78□□□□□ -0.84
ATL3-201ENST00000398868 LAMB3Q13751 1172 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 AKIRIN2Q53H80 203 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 AARS2Q5JTZ9 985 aaKnown RBP9.78□□□□□ -0.84
ATL3-201ENST00000398868 UNC13DQ70J99 1090 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 NSUN4Q96CB9 384 aaKnown RBP9.78□□□□□ -0.84
ATL3-201ENST00000398868 SEC16BQ96JE7 1060 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 TRIM33Q9UPN9 1127 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 N6AMT1Q9Y5N5 214 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 APOL1O14791 398 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 NPM3O75607 178 aaKnown RBP9.78□□□□□ -0.84
ATL3-201ENST00000398868 AKAP5P24588 427 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 MED21Q13503 144 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 TMC5Q6UXY8 1006 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 NUDT18Q6ZVK8 323 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 IFNEQ86WN2 208 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 SIKE1Q9BRV8 207 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 BBS2Q9BXC9 721 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 THAP9Q9H5L6 903 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 TUT1Q9H6E5 874 aaKnown RBP9.78□□□□□ -0.84
ATL3-201ENST00000398868 SYTL2Q9HCH5 934 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 TMEM39AQ9NV64 488 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 CFAP73A6NFT4 308 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 S100A5P33763 92 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 KPNA1P52294 538 aaPredicted RBP9.78□□□□□ -0.84
ATL3-201ENST00000398868 TOMM20Q15388 145 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 C10orf53Q8N6V4 93 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 CCT8L2Q96SF2 557 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 AMACRQ9UHK6 382 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 C17orf102A2RUQ5 167 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 PCDH8O95206 1070 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 SMARCA1P28370 1054 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 SEC24CP53992 1094 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 CDH18Q13634 790 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 CHSY1Q86X52 802 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 GPR63Q9BZJ6 419 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 MTIF3Q9H2K0 278 aaKnown RBP9.78□□□□□ -0.84
ATL3-201ENST00000398868 PIH1D1Q9NWS0 290 aaKnown RBP9.78□□□□□ -0.84
ATL3-201ENST00000398868 ARIH1Q9Y4X5 557 aaPredicted RBP9.78□□□□□ -0.84
ATL3-201ENST00000398868 IQSEC2Q5JU85 1478 aa9.77□□□□□ -0.84
ATL3-201ENST00000398868 MOXD2PA6NHM9 499 aa9.77□□□□□ -0.84
ATL3-201ENST00000398868 AIM2O14862 343 aa9.77□□□□□ -0.84
ATL3-201ENST00000398868 PDE5AO76074 875 aa9.77□□□□□ -0.84
ATL3-201ENST00000398868 MBL2P11226 248 aaPredicted RBP9.77□□□□□ -0.84
ATL3-201ENST00000398868 SERPINB1P30740 379 aa9.77□□□□□ -0.84
ATL3-201ENST00000398868 KCNB1Q14721 858 aa9.77□□□□□ -0.84
ATL3-201ENST00000398868 KCTD19Q17RG1 926 aaPredicted RBP9.77□□□□□ -0.84
ATL3-201ENST00000398868 ALFQ53S48 1182 aa9.77□□□□□ -0.84
ATL3-201ENST00000398868 ARMC6Q6NXE6 501 aa9.77□□□□□ -0.84
ATL3-201ENST00000398868 SH3BP5LQ7L8J4 393 aa9.77□□□□□ -0.84
ATL3-201ENST00000398868 TMC7Q7Z402 723 aa9.77□□□□□ -0.84
ATL3-201ENST00000398868 TEX9Q8N6V9 391 aa9.77□□□□□ -0.84
ATL3-201ENST00000398868 PDGFDQ9GZP0 370 aaPredicted RBP9.77□□□□□ -0.84
ATL3-201ENST00000398868 C2orf40Q9H1Z8 148 aa9.77□□□□□ -0.84
ATL3-201ENST00000398868 CAAP1Q9H8G2 361 aa9.77□□□□□ -0.84
ATL3-201ENST00000398868 EXOSC4Q9NPD3 245 aaKnown RBP9.77□□□□□ -0.84
ATL3-201ENST00000398868 TMEM161AQ9NX61 479 aa9.77□□□□□ -0.84
ATL3-201ENST00000398868 STAP1Q9ULZ2 295 aa9.77□□□□□ -0.84
ATL3-201ENST00000398868 GTF2A1LQ9UNN4 478 aa9.77□□□□□ -0.84
ATL3-201ENST00000398868 BAZ2BQ9UIF8 2168 aaKnown RBP9.77□□□□□ -0.85
ATL3-201ENST00000398868 CETPP11597 493 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 TARSP26639 723 aaKnown RBP9.77□□□□□ -0.85
ATL3-201ENST00000398868 BEX3Q00994 111 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 AP3B2Q13367 1082 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 GRM4Q14833 912 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 EMC2Q15006 297 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 KCTD21Q4G0X4 260 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 RESP18Q5W5W9 173 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 RRM2BQ7LG56 351 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 MTERF3Q96E29 417 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 REEP2Q9BRK0 252 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 TEX13BQ9BXU2 312 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 METTL5Q9NRN9 209 aaKnown RBP9.77□□□□□ -0.85
ATL3-201ENST00000398868 ZBED6P86452 979 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 NCOA4Q13772 614 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 PLCL1Q15111 1095 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 ATF7IP2Q5U623 682 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 LAYNQ6UX15 382 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms