RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 TDP1Q9NUW8 608 aa3.48□□□□□ -1.85
CD47-203ENST00000398258 FAM30AQ9NZY2 134 aa3.48□□□□□ -1.85
CD47-203ENST00000398258 USP25Q9UHP3 1055 aa3.48□□□□□ -1.85
CD47-203ENST00000398258 CHST2Q9Y4C5 530 aa3.48□□□□□ -1.85
CD47-203ENST00000398258 CAPN8A6NHC0 703 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 UNC119BA6NIH7 251 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 NT5C1B-RDH14C9J2C7 533 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 WNT10BO00744 389 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 IPO13O94829 963 aaKnown RBP3.47□□□□□ -1.85
CD47-203ENST00000398258 FTLP02792 175 aaPredicted RBP3.47□□□□□ -1.85
CD47-203ENST00000398258 TYRP14679 529 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 ALOX15P16050 662 aaPredicted RBP3.47□□□□□ -1.85
CD47-203ENST00000398258 RPL17P18621 184 aaKnown RBP3.47□□□□□ -1.85
CD47-203ENST00000398258 GNAT2P19087 354 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 MPLP40238 635 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 CACNB3P54284 484 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 ELLP55199 621 aaPredicted RBP3.47□□□□□ -1.85
CD47-203ENST00000398258 CTXN1P60606 82 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 RAB1AP62820 205 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 NHLH1Q02575 133 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 SP140Q13342 867 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 BIRC2Q13490 618 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 PICALMQ13492 652 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 BEAN1Q3B7T3 259 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 DACT2Q5SW24 774 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 SYCP2LQ5T4T6 812 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 EMC10Q5UCC4 262 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 OTUD7BQ6GQQ9 843 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 DARS2Q6PI48 645 aaKnown RBP3.47□□□□□ -1.85
CD47-203ENST00000398258 MAEAQ7L5Y9 396 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 XYLT1Q86Y38 959 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 RHOT1Q8IXI2 618 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 PQLC1Q8N2U9 271 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 LCORLQ8N3X6 602 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 ZGPATQ8N5A5 531 aaKnown RBP3.47□□□□□ -1.85
CD47-203ENST00000398258 IL17RAQ96F46 866 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 ZC3H10Q96K80 434 aaKnown RBP3.47□□□□□ -1.85
CD47-203ENST00000398258 CLPTM1LQ96KA5 538 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 COQ10AQ96MF6 247 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 STRBPQ96SI9 672 aaKnown RBP3.47□□□□□ -1.85
CD47-203ENST00000398258 CDC5LQ99459 802 aaKnown RBP3.47□□□□□ -1.85
CD47-203ENST00000398258 ADAM2Q99965 735 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 NAA15Q9BXJ9 866 aaKnown RBP3.47□□□□□ -1.85
CD47-203ENST00000398258 ATP6V0A4Q9HBG4 840 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 LANCL2Q9NS86 450 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 KLHL11Q9NVR0 708 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 RGS17Q9UGC6 210 aaPredicted RBP3.47□□□□□ -1.85
CD47-203ENST00000398258 RIPOR2Q9Y4F9 1068 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 NR2E3Q9Y5X4 410 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 COMMD10Q9Y6G5 202 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 ZMYM3Q14202 1370 aa3.47□□□□□ -1.85
CD47-203ENST00000398258 MYBBP1AQ9BQG0 1328 aaKnown RBP3.46□□□□□ -1.85
CD47-203ENST00000398258 PLEKHD1A6NEE1 506 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 LEFTY2O00292 366 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 PMM2O15305 246 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 TEX33O43247 280 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 HOXA3O43365 443 aaPredicted RBP3.46□□□□□ -1.86
CD47-203ENST00000398258 TPD52L2O43399 206 aaKnown RBP3.46□□□□□ -1.86
CD47-203ENST00000398258 PPFIA4O75335 1185 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 GPR32O75388 356 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 NDUFA10O95299 355 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 MYBP10242 640 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 IL2RBP14784 551 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 DDCP20711 480 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 MALP21145 153 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 PCSK1P29120 753 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 FLT3LGP49771 235 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 GZMKP49863 264 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 ALDH5A1P51649 535 aaPredicted RBP3.46□□□□□ -1.86
CD47-203ENST00000398258 APBA1Q02410 837 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 MRPL49Q13405 166 aaKnown RBP3.46□□□□□ -1.86
CD47-203ENST00000398258 SNAPC2Q13487 334 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 POLD3Q15054 466 aaPredicted RBP3.46□□□□□ -1.86
CD47-203ENST00000398258 LLGL1Q15334 1064 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 LONRF3Q496Y0 759 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 FAM47AQ5JRC9 791 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 PRAMEF14Q5SWL7 426 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 RNF220Q5VTB9 566 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 IL31Q6EBC2 164 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 TOGARAM2Q6ZUX3 1019 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 PDZD4Q76G19 769 aaPredicted RBP3.46□□□□□ -1.86
CD47-203ENST00000398258 DAAM2Q86T65 1068 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 FAM90A1Q86YD7 464 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 REPS2Q8NFH8 660 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 OR52N2Q8NGI0 321 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 GJA10Q969M2 543 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 CPPED1Q9BRF8 314 aaPredicted RBP3.46□□□□□ -1.86
CD47-203ENST00000398258 LSM14BQ9BX40 385 aaKnown RBP3.46□□□□□ -1.86
CD47-203ENST00000398258 C22orf23Q9BZE7 217 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 BTBD1Q9H0C5 482 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 WDCPQ9H6R7 721 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 AKIP1Q9NQ31 210 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 SIDT1Q9NXL6 827 aaKnown RBP3.46□□□□□ -1.86
CD47-203ENST00000398258 AJAP1Q9UKB5 411 aaPredicted RBP3.46□□□□□ -1.86
CD47-203ENST00000398258 PHTF1Q9UMS5 762 aa3.46□□□□□ -1.86
CD47-203ENST00000398258 PIPSLA2A3N6 862 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 LRRC14BA6NHZ5 514 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 ISM1B1AKI9 464 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 MYO1FO00160 1098 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 PJA2O43164 708 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms