RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 HDAC6Q9UBN7 1215 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 CCDC39Q9UFE4 941 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 PHTF1Q9UMS5 762 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 DMTF1Q9Y222 760 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 GIT1Q9Y2X7 761 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 NUP210Q8TEM1 1887 aaPredicted RBP4.13□□□□□ -1.75
UBE3A-202ENST00000397954 DCDC2BA2VCK2 349 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 MYADML2A6NDP7 307 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 FAM86B1E9PN63 330 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 GFRA2O00451 464 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 PQBP1O60828 265 aaKnown RBP4.13□□□□□ -1.75
UBE3A-202ENST00000397954 CD2BP2O95400 341 aaKnown RBP4.13□□□□□ -1.75
UBE3A-202ENST00000397954 FAM86B2P0C5J1 330 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 ATP2A2P16615 1042 aaKnown RBP4.13□□□□□ -1.75
UBE3A-202ENST00000397954 ATF7P17544 494 aaPredicted RBP4.13□□□□□ -1.75
UBE3A-202ENST00000397954 PFKLP17858 780 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 POU3F2P20265 443 aaPredicted RBP4.13□□□□□ -1.75
UBE3A-202ENST00000397954 HOXA13P31271 388 aaPredicted RBP4.13□□□□□ -1.75
UBE3A-202ENST00000397954 PRKCEQ02156 737 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 PPP2R3AQ06190 1150 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 TBC1D8BQ0IIM8 1120 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 ITGB3BPQ13352 177 aaPredicted RBP4.13□□□□□ -1.75
UBE3A-202ENST00000397954 CCINQ13939 588 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 ME3Q16798 604 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 TTC38Q5R3I4 469 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 USP17L6PQ6QN14 398 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 ZPBP2Q6X784 338 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 PDZD3Q86UT5 571 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 FCHSD1Q86WN1 690 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 SCUBE1Q8IWY4 988 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 CMIPQ8IY22 773 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 DIS3L2Q8IYB7 885 aaKnown RBP4.13□□□□□ -1.75
UBE3A-202ENST00000397954 PDILTQ8N807 584 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 LRRN4CLQ8ND94 238 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 URGCPQ8TCY9 931 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 PLPPR2Q96GM1 343 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 MSANTD3Q96H12 275 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 HSD17B14Q9BPX1 270 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 EPN3Q9H201 632 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 IFT22Q9H7X7 185 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 ZFYVE1Q9HBF4 777 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 CYP26B1Q9NR63 512 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 SLC38A7Q9NVC3 462 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 CFAP45Q9UL16 551 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 PCDHA12Q9UN75 941 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 SMC3Q9UQE7 1217 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 TRAF6Q9Y4K3 522 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 CITO14578 2027 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 C9IYK1 514 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 AGRPO00253 132 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 FSCN2O14926 492 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 MAPK13O15264 365 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 CTDNEP1O95476 244 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 ECEL1O95672 775 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 FGF19O95750 216 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 DARSP14868 501 aaKnown RBP4.13□□□□□ -1.75
UBE3A-202ENST00000397954 HOXB8P17481 243 aaPredicted RBP4.13□□□□□ -1.75
UBE3A-202ENST00000397954 GPC1P35052 558 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 ARL2P36404 184 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 RENBPP51606 427 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 NFIL3Q16649 462 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 HSDL1Q3SXM5 330 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 MINDY4Q4G0A6 757 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 PRAMEF19Q5SWL8 479 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 KRT79Q5XKE5 535 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 NOTUMQ6P988 496 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 ABHD17CQ6PCB6 329 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 ZNF227Q86WZ6 799 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 HSCBQ8IWL3 235 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 CPA6Q8N4T0 437 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 TMEM102Q8N9M5 508 aaPredicted RBP4.13□□□□□ -1.75
UBE3A-202ENST00000397954 LEMD2Q8NC56 503 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 IL31RAQ8NI17 732 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 GOLGA5Q8TBA6 731 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 KCNG4Q8TDN1 519 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 MRPL38Q96DV4 380 aaKnown RBP4.13□□□□□ -1.75
UBE3A-202ENST00000397954 CALML4Q96GE6 196 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 FUBP3Q96I24 572 aaKnown RBP eCLIP4.13□□□□□ -1.75
UBE3A-202ENST00000397954 NECTIN4Q96NY8 510 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 IPO9Q96P70 1041 aaKnown RBP4.13□□□□□ -1.75
UBE3A-202ENST00000397954 CTAGE1Q96RT6 745 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 PCYT2Q99447 389 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 SENP2Q9HC62 589 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 KIAA1586Q9HCI6 787 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 AGPAT5Q9NUQ2 364 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 DACH1Q9UI36 760 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 EXOC7Q9UPT5 735 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 WASF2Q9Y6W5 498 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 TSC2P49815 1807 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 ANK1P16157 1881 aa4.13□□□□□ -1.75
UBE3A-202ENST00000397954 FAM237AA0A1B0GTK4 181 aa4.12□□□□□ -1.75
UBE3A-202ENST00000397954 H3BNC9 293 aa4.12□□□□□ -1.75
UBE3A-202ENST00000397954 GPR32O75388 356 aa4.12□□□□□ -1.75
UBE3A-202ENST00000397954 STBD1O95210 358 aa4.12□□□□□ -1.75
UBE3A-202ENST00000397954 MAP3K6O95382 1288 aa4.12□□□□□ -1.75
UBE3A-202ENST00000397954 AGR2O95994 175 aa4.12□□□□□ -1.75
UBE3A-202ENST00000397954 B3GALT4O96024 378 aa4.12□□□□□ -1.75
UBE3A-202ENST00000397954 ADRB2P07550 413 aa4.12□□□□□ -1.75
UBE3A-202ENST00000397954 FDPSP14324 419 aaKnown RBP4.12□□□□□ -1.75
UBE3A-202ENST00000397954 INSRRP14616 1297 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms