RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 BOLA3Q53S33 107 aa13.06□□□□□ -0.32
SOCS6-201ENST00000397942 KCNV1Q6PIU1 500 aa13.06□□□□□ -0.32
SOCS6-201ENST00000397942 TATDN2Q93075 761 aa13.06□□□□□ -0.32
SOCS6-201ENST00000397942 NT5C1AQ9BXI3 368 aa13.06□□□□□ -0.32
SOCS6-201ENST00000397942 UPF3AQ9H1J1 476 aaKnown RBP13.06□□□□□ -0.32
SOCS6-201ENST00000397942 PPCSQ9HAB8 311 aa13.06□□□□□ -0.32
SOCS6-201ENST00000397942 ASAP2O43150 1006 aa13.06□□□□□ -0.32
SOCS6-201ENST00000397942 PYGMP11217 842 aa13.06□□□□□ -0.32
SOCS6-201ENST00000397942 STIP1P31948 543 aaKnown RBP13.06□□□□□ -0.32
SOCS6-201ENST00000397942 IDI2Q9BXS1 227 aa13.06□□□□□ -0.32
SOCS6-201ENST00000397942 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.06□□□□□ -0.32
SOCS6-201ENST00000397942 TMEM150BA6NC51 233 aa13.06□□□□□ -0.32
SOCS6-201ENST00000397942 RGL2O15211 777 aa13.06□□□□□ -0.32
SOCS6-201ENST00000397942 PROSCO94903 275 aa13.06□□□□□ -0.32
SOCS6-201ENST00000397942 ESRRGP62508 458 aa13.06□□□□□ -0.32
SOCS6-201ENST00000397942 LVRNQ6Q4G3 990 aa13.06□□□□□ -0.32
SOCS6-201ENST00000397942 AGGF1Q8N302 714 aaeCLIP13.06□□□□□ -0.32
SOCS6-201ENST00000397942 AGBL3Q8NEM8 1001 aa13.06□□□□□ -0.32
SOCS6-201ENST00000397942 KRT35Q92764 455 aa13.06□□□□□ -0.32
SOCS6-201ENST00000397942 MYOZ2Q9NPC6 264 aa13.06□□□□□ -0.32
SOCS6-201ENST00000397942 DONSONQ9NYP3 566 aa13.06□□□□□ -0.32
SOCS6-201ENST00000397942 XPO7Q9UIA9 1087 aaKnown RBP13.06□□□□□ -0.32
SOCS6-201ENST00000397942 SHPRHQ149N8 1683 aa13.06□□□□□ -0.32
SOCS6-201ENST00000397942 SNRPAP09012 282 aaKnown RBP13.06□□□□□ -0.32
SOCS6-201ENST00000397942 KRT4P19013 534 aa13.06□□□□□ -0.32
SOCS6-201ENST00000397942 SLC12A1Q13621 1099 aa13.06□□□□□ -0.32
SOCS6-201ENST00000397942 CBWD6Q4V339 395 aa13.06□□□□□ -0.32
SOCS6-201ENST00000397942 CBWD3Q5JTY5 395 aa13.06□□□□□ -0.32
SOCS6-201ENST00000397942 CBWD5Q5RIA9 395 aa13.06□□□□□ -0.32
SOCS6-201ENST00000397942 CAPRIN2Q6IMN6 1127 aaKnown RBP13.06□□□□□ -0.32
SOCS6-201ENST00000397942 TMC3Q7Z5M5 1100 aa13.06□□□□□ -0.32
SOCS6-201ENST00000397942 PDZD8Q8NEN9 1154 aa13.06□□□□□ -0.32
SOCS6-201ENST00000397942 SLC26A7Q8TE54 656 aa13.06□□□□□ -0.32
SOCS6-201ENST00000397942 SCFD2Q8WU76 684 aa13.06□□□□□ -0.32
SOCS6-201ENST00000397942 ZNF844Q08AG5 666 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 ATF7IP2Q5U623 682 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 KLC3Q6P597 504 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 ARID3BQ8IVW6 561 aaPredicted RBP13.05□□□□□ -0.32
SOCS6-201ENST00000397942 FAM71DQ8N9W8 422 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 INPP4AQ96PE3 977 aaPredicted RBP13.05□□□□□ -0.32
SOCS6-201ENST00000397942 TSC22D3Q99576 134 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 OSBPL1AQ9BXW6 950 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 IGF2BP3O00425 579 aaKnown RBP eCLIP13.05□□□□□ -0.32
SOCS6-201ENST00000397942 APOL1O14791 398 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 RFC5P40937 340 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 STX3Q13277 289 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 MORF4L2Q15014 288 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 CYP4A22Q5TCH4 519 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 C4orf32Q8N8J7 132 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 FAM129AQ9BZQ8 928 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 ACP6Q9NPH0 428 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 PRMT7Q9NVM4 692 aaPredicted RBP13.05□□□□□ -0.32
SOCS6-201ENST00000397942 GGA3Q9NZ52 723 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 PAK5Q9P286 719 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 ZC3H11AO75152 810 aaKnown RBP eCLIP13.05□□□□□ -0.32
SOCS6-201ENST00000397942 FGRP09769 529 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 CASP2P42575 452 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 PLCB4Q15147 1175 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 STILQ15468 1287 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 STYK1Q6J9G0 422 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 KIAA1841Q6NSI8 718 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 GMCL1P1Q8NEA9 526 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 EXT2Q93063 718 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 ZKSCAN4Q969J2 545 aaPredicted RBP13.05□□□□□ -0.32
SOCS6-201ENST00000397942 SDCCAG3Q96C92 435 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 PGBD4Q96DM1 585 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 HSD3B7Q9H2F3 369 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 NDE1Q9NXR1 346 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 USP20Q9Y2K6 914 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 SOX10P56693 466 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 PTK7Q13308 1070 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 TMEM132DQ14C87 1099 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 TEX2Q8IWB9 1127 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 RIBC1Q8N443 379 aaPredicted RBP13.05□□□□□ -0.32
SOCS6-201ENST00000397942 ARHGAP23Q9P227 1491 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 LOC100653049A0A140TA62 436 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 ASB14A6NK59 587 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 B2RBV5 119 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 MEIS2O14770 477 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 MAGEB2O15479 319 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 KRT34O76011 436 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 RARAP10276 462 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 CXCL9Q07325 125 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 FAXCQ5TGI0 409 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 MTBPQ96DY7 904 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 MED15Q96RN5 788 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 FSD1LQ9BXM9 530 aa13.05□□□□□ -0.32
SOCS6-201ENST00000397942 FAF1Q9UNN5 650 aaPredicted RBP13.05□□□□□ -0.32
SOCS6-201ENST00000397942 GAKO14976 1311 aa13.04□□□□□ -0.32
SOCS6-201ENST00000397942 TRIM49D1C9J1S8 452 aa13.04□□□□□ -0.32
SOCS6-201ENST00000397942 GMPSP49915 693 aaPredicted RBP13.04□□□□□ -0.32
SOCS6-201ENST00000397942 LRRC4BQ9NT99 713 aa13.04□□□□□ -0.32
SOCS6-201ENST00000397942 SDK1Q7Z5N4 2213 aa13.04□□□□□ -0.32
SOCS6-201ENST00000397942 ELF1P32519 619 aa13.04□□□□□ -0.32
SOCS6-201ENST00000397942 ACAD11Q709F0 780 aa13.04□□□□□ -0.32
SOCS6-201ENST00000397942 PTF1AQ7RTS3 328 aa13.04□□□□□ -0.32
SOCS6-201ENST00000397942 UBA3Q8TBC4 463 aa13.04□□□□□ -0.32
SOCS6-201ENST00000397942 ZNF606Q8WXB4 792 aa13.04□□□□□ -0.32
SOCS6-201ENST00000397942 CCDC78A2IDD5 438 aa13.04□□□□□ -0.32
SOCS6-201ENST00000397942 H3BRJ5 948 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms