RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 RHBDF2Q6PJF5 856 aa19.46■□□□□ 0.71
CHRFAM7A-202ENST00000397827 CPLX4Q7Z7G2 160 aa19.46■□□□□ 0.71
CHRFAM7A-202ENST00000397827 KCNN1Q92952 543 aa19.46■□□□□ 0.71
CHRFAM7A-202ENST00000397827 OSBPL8Q9BZF1 889 aa19.46■□□□□ 0.71
CHRFAM7A-202ENST00000397827 IMPG2Q9BZV3 1241 aa19.46■□□□□ 0.71
CHRFAM7A-202ENST00000397827 CNTN6Q9UQ52 1028 aa19.46■□□□□ 0.71
CHRFAM7A-202ENST00000397827 SIP14410 1827 aa19.46■□□□□ 0.71
CHRFAM7A-202ENST00000397827 ARIH2O95376 493 aa19.45■□□□□ 0.7
CHRFAM7A-202ENST00000397827 GAS8O95995 478 aa19.45■□□□□ 0.7
CHRFAM7A-202ENST00000397827 ZFYVE27Q5T4F4 411 aa19.45■□□□□ 0.7
CHRFAM7A-202ENST00000397827 C6orf89Q6UWU4 347 aa19.45■□□□□ 0.7
CHRFAM7A-202ENST00000397827 GADL1Q6ZQY3 521 aa19.45■□□□□ 0.7
CHRFAM7A-202ENST00000397827 RIOX2Q8IUF8 465 aa19.45■□□□□ 0.7
CHRFAM7A-202ENST00000397827 BRSK2Q8IWQ3 736 aa19.45■□□□□ 0.7
CHRFAM7A-202ENST00000397827 ATL2Q8NHH9 583 aa19.45■□□□□ 0.7
CHRFAM7A-202ENST00000397827 MAIP1Q8WWC4 291 aa19.45■□□□□ 0.7
CHRFAM7A-202ENST00000397827 SPATC1LQ9H0A9 340 aa19.45■□□□□ 0.7
CHRFAM7A-202ENST00000397827 WDR90Q96KV7 1748 aa19.45■□□□□ 0.7
CHRFAM7A-202ENST00000397827 KLHL33A6NCF5 533 aa19.45■□□□□ 0.7
CHRFAM7A-202ENST00000397827 PSTPIP1O43586 416 aa19.45■□□□□ 0.7
CHRFAM7A-202ENST00000397827 FAM189A1O60320 539 aa19.45■□□□□ 0.7
CHRFAM7A-202ENST00000397827 AGTP01019 485 aa19.45■□□□□ 0.7
CHRFAM7A-202ENST00000397827 ATF2P15336 505 aa19.45■□□□□ 0.7
CHRFAM7A-202ENST00000397827 ACTN3Q08043 901 aaPredicted RBP19.45■□□□□ 0.7
CHRFAM7A-202ENST00000397827 HSDL1Q3SXM5 330 aa19.45■□□□□ 0.7
CHRFAM7A-202ENST00000397827 RNF149Q8NC42 400 aa19.45■□□□□ 0.7
CHRFAM7A-202ENST00000397827 SEPT1Q8WYJ6 367 aa19.45■□□□□ 0.7
CHRFAM7A-202ENST00000397827 SEC16BQ96JE7 1060 aa19.45■□□□□ 0.7
CHRFAM7A-202ENST00000397827 SCLT1Q96NL6 688 aa19.45■□□□□ 0.7
CHRFAM7A-202ENST00000397827 ATXN2Q99700 1313 aaKnown RBP19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 ASS1P00966 412 aaKnown RBP19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 PGK2P07205 417 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 KRT10P13645 584 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 EDNRBP24530 442 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 KYNUQ16719 465 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 ZNF568Q3ZCX4 644 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 FAM160B1Q5W0V3 765 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 KAZNQ674X7 775 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 CDR2LQ86X02 465 aaPredicted RBP19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 FEZF2Q8TBJ5 459 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 VCPIP1Q96JH7 1222 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 FAM129AQ9BZQ8 928 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 SH3BP1Q9Y3L3 701 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 FOXO6A8MYZ6 492 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 GJB1P08034 283 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 WEE2P0C1S8 567 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 OSTNP61366 133 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 CRYMQ14894 314 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 SCARA5Q6ZMJ2 495 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 TRMT10CQ7L0Y3 403 aaKnown RBP19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 GRK7Q8WTQ7 553 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 ATXN2LQ8WWM7 1075 aaKnown RBP19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 ZBTB10Q96DT7 871 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 TMEM109Q9BVC6 243 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 PARVAQ9NVD7 372 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 SCINQ9Y6U3 715 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 LOC285556D6RIA3 1793 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 TOM1L1O75674 476 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 DRD4P21917 467 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 MMP8P22894 467 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 C1QBPQ07021 282 aaKnown RBP19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 LAMTOR4Q0VGL1 99 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 METTL7BQ6UX53 244 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 ZPBP2Q6X784 338 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 KATNAL2Q8IYT4 538 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 NLGN2Q8NFZ4 835 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 CHMP6Q96FZ7 201 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 MRPL4Q9BYD3 311 aaKnown RBP19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 CTNNAL1Q9UBT7 734 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 ANAPC5Q9UJX4 755 aa19.44■□□□□ 0.7
CHRFAM7A-202ENST00000397827 MAN1A1P33908 653 aa19.43■□□□□ 0.7
CHRFAM7A-202ENST00000397827 ZNF132P52740 706 aa19.43■□□□□ 0.7
CHRFAM7A-202ENST00000397827 YTHDF3Q7Z739 585 aaKnown RBP19.43■□□□□ 0.7
CHRFAM7A-202ENST00000397827 ACSF2Q96CM8 615 aaPredicted RBP19.43■□□□□ 0.7
CHRFAM7A-202ENST00000397827 PRMT1Q99873 361 aaKnown RBP19.43■□□□□ 0.7
CHRFAM7A-202ENST00000397827 INTS9Q9NV88 658 aaKnown RBP19.43■□□□□ 0.7
CHRFAM7A-202ENST00000397827 CD2APQ9Y5K6 639 aa19.43■□□□□ 0.7
CHRFAM7A-202ENST00000397827 PPP2R3BQ9Y5P8 575 aa19.43■□□□□ 0.7
CHRFAM7A-202ENST00000397827 C5orf60A6NFR6 353 aa19.43■□□□□ 0.7
CHRFAM7A-202ENST00000397827 FSBPO95073 299 aa19.43■□□□□ 0.7
CHRFAM7A-202ENST00000397827 IFNAR2P48551 515 aa19.43■□□□□ 0.7
CHRFAM7A-202ENST00000397827 CCNHP51946 323 aaPredicted RBP19.43■□□□□ 0.7
CHRFAM7A-202ENST00000397827 CEP57Q86XR8 500 aa19.43■□□□□ 0.7
CHRFAM7A-202ENST00000397827 WDR49Q8IV35 697 aa19.43■□□□□ 0.7
CHRFAM7A-202ENST00000397827 TRAPPC12Q8WVT3 735 aa19.43■□□□□ 0.7
CHRFAM7A-202ENST00000397827 CENPTQ96BT3 561 aa19.43■□□□□ 0.7
CHRFAM7A-202ENST00000397827 MCEEQ96PE7 176 aa19.43■□□□□ 0.7
CHRFAM7A-202ENST00000397827 ACO2Q99798 780 aaKnown RBP19.43■□□□□ 0.7
CHRFAM7A-202ENST00000397827 CISHQ9NSE2 258 aa19.43■□□□□ 0.7
CHRFAM7A-202ENST00000397827 PTPRFP10586 1907 aa19.42■□□□□ 0.7
CHRFAM7A-202ENST00000397827 F8VP50 259 aa19.42■□□□□ 0.7
CHRFAM7A-202ENST00000397827 CREB1P16220 341 aa19.42■□□□□ 0.7
CHRFAM7A-202ENST00000397827 CLNS1AP54105 237 aaKnown RBP19.42■□□□□ 0.7
CHRFAM7A-202ENST00000397827 TFAMQ00059 246 aaKnown RBP19.42■□□□□ 0.7
CHRFAM7A-202ENST00000397827 ZNF252P-AS1Q0IIN9 211 aa19.42■□□□□ 0.7
CHRFAM7A-202ENST00000397827 CCNG2Q16589 344 aa19.42■□□□□ 0.7
CHRFAM7A-202ENST00000397827 TNFAIP8L3Q5GJ75 292 aa19.42■□□□□ 0.7
CHRFAM7A-202ENST00000397827 SYDE1Q6ZW31 735 aaPredicted RBP19.42■□□□□ 0.7
CHRFAM7A-202ENST00000397827 ZNF365Q70YC5 407 aa19.42■□□□□ 0.7
CHRFAM7A-202ENST00000397827 EXOC3L1Q86VI1 746 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms