RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 SGSM1Q2NKQ1 1148 aa18.26■□□□□ 0.51
MCF2L-208ENST00000397030 SLC44A2Q8IWA5 706 aaPredicted RBP18.26■□□□□ 0.51
MCF2L-208ENST00000397030 RPRD1AQ96P16 312 aaPredicted RBP18.26■□□□□ 0.51
MCF2L-208ENST00000397030 RNF14Q9UBS8 474 aa18.26■□□□□ 0.51
MCF2L-208ENST00000397030 RAB23Q9ULC3 237 aa18.26■□□□□ 0.51
MCF2L-208ENST00000397030 NPC1L1Q9UHC9 1359 aa18.26■□□□□ 0.51
MCF2L-208ENST00000397030 KDM6AO15550 1401 aaPredicted RBP18.26■□□□□ 0.51
MCF2L-208ENST00000397030 HBP1O60381 514 aa18.26■□□□□ 0.51
MCF2L-208ENST00000397030 LLGL2Q6P1M3 1020 aa18.26■□□□□ 0.51
MCF2L-208ENST00000397030 TMEM60Q9H2L4 133 aa18.26■□□□□ 0.51
MCF2L-208ENST00000397030 ADNPQ9H2P0 1102 aa18.26■□□□□ 0.51
MCF2L-208ENST00000397030 SPATA31A6Q5VVP1 1343 aa18.26■□□□□ 0.51
MCF2L-208ENST00000397030 IL18RAPO95256 599 aa18.26■□□□□ 0.51
MCF2L-208ENST00000397030 HPGDP15428 266 aa18.26■□□□□ 0.51
MCF2L-208ENST00000397030 CCDC137Q6PK04 289 aaKnown RBP18.26■□□□□ 0.51
MCF2L-208ENST00000397030 ENOSF1Q7L5Y1 443 aa18.26■□□□□ 0.51
MCF2L-208ENST00000397030 RBBP8NLQ8NC74 664 aaPredicted RBP18.26■□□□□ 0.51
MCF2L-208ENST00000397030 PI4K2AQ9BTU6 479 aa18.26■□□□□ 0.51
MCF2L-208ENST00000397030 V9GYQ6 96 aa18.26■□□□□ 0.51
MCF2L-208ENST00000397030 CASTOR2A6NHX0 329 aa18.26■□□□□ 0.51
MCF2L-208ENST00000397030 GSG1L2A8MUP6 293 aa18.26■□□□□ 0.51
MCF2L-208ENST00000397030 PSMD3O43242 534 aa18.26■□□□□ 0.51
MCF2L-208ENST00000397030 EIF3BP55884 814 aaKnown RBP18.26■□□□□ 0.51
MCF2L-208ENST00000397030 NFRKBQ6P4R8 1299 aa18.26■□□□□ 0.51
MCF2L-208ENST00000397030 C16orf87Q6PH81 154 aa18.26■□□□□ 0.51
MCF2L-208ENST00000397030 CHST13Q8NET6 341 aa18.26■□□□□ 0.51
MCF2L-208ENST00000397030 BLOC1S5Q8TDH9 187 aa18.26■□□□□ 0.51
MCF2L-208ENST00000397030 ZNF556Q9HAH1 456 aa18.26■□□□□ 0.51
MCF2L-208ENST00000397030 SENP2Q9HC62 589 aa18.26■□□□□ 0.51
MCF2L-208ENST00000397030 DPP3Q9NY33 737 aa18.26■□□□□ 0.51
MCF2L-208ENST00000397030 SPACA6W5XKT8 324 aa18.26■□□□□ 0.51
MCF2L-208ENST00000397030 RGS4P49798 205 aa18.26■□□□□ 0.51
MCF2L-208ENST00000397030 STYK1Q6J9G0 422 aa18.26■□□□□ 0.51
MCF2L-208ENST00000397030 RNF168Q8IYW5 571 aaPredicted RBP18.26■□□□□ 0.51
MCF2L-208ENST00000397030 WNT8AQ9H1J5 351 aa18.26■□□□□ 0.51
MCF2L-208ENST00000397030 TMA16Q96EY4 203 aaKnown RBP18.25■□□□□ 0.51
MCF2L-208ENST00000397030 HPDLQ96IR7 371 aa18.25■□□□□ 0.51
MCF2L-208ENST00000397030 IL1RL2Q9HB29 575 aa18.25■□□□□ 0.51
MCF2L-208ENST00000397030 RFC5P40937 340 aa18.25■□□□□ 0.51
MCF2L-208ENST00000397030 TAF6P49848 677 aa18.25■□□□□ 0.51
MCF2L-208ENST00000397030 MTM1Q13496 603 aa18.25■□□□□ 0.51
MCF2L-208ENST00000397030 LVRNQ6Q4G3 990 aa18.25■□□□□ 0.51
MCF2L-208ENST00000397030 CDHR2Q9BYE9 1310 aa18.25■□□□□ 0.51
MCF2L-208ENST00000397030 FGFR4P22455 802 aa18.25■□□□□ 0.51
MCF2L-208ENST00000397030 KAT2BQ92831 832 aa18.25■□□□□ 0.51
MCF2L-208ENST00000397030 PNMA5Q96PV4 448 aa18.25■□□□□ 0.51
MCF2L-208ENST00000397030 PANX2Q96RD6 677 aa18.25■□□□□ 0.51
MCF2L-208ENST00000397030 VCPKMTQ9H867 229 aa18.25■□□□□ 0.51
MCF2L-208ENST00000397030 OLFML3Q9NRN5 406 aa18.25■□□□□ 0.51
MCF2L-208ENST00000397030 XPO7Q9UIA9 1087 aaKnown RBP18.25■□□□□ 0.51
MCF2L-208ENST00000397030 PCNAP12004 261 aa18.25■□□□□ 0.51
MCF2L-208ENST00000397030 OCA2Q04671 838 aa18.25■□□□□ 0.51
MCF2L-208ENST00000397030 FAM136AQ96C01 138 aa18.25■□□□□ 0.51
MCF2L-208ENST00000397030 TMEM117Q9H0C3 514 aa18.25■□□□□ 0.51
MCF2L-208ENST00000397030 ABHD10Q9NUJ1 306 aa18.25■□□□□ 0.51
MCF2L-208ENST00000397030 MTMR4Q9NYA4 1195 aa18.25■□□□□ 0.51
MCF2L-208ENST00000397030 SYNMO15061 1565 aa18.25■□□□□ 0.51
MCF2L-208ENST00000397030 CYTH3O43739 400 aa18.25■□□□□ 0.51
MCF2L-208ENST00000397030 SNRNP35Q16560 246 aaKnown RBP18.25■□□□□ 0.51
MCF2L-208ENST00000397030 WWOXQ9NZC7 414 aa18.25■□□□□ 0.51
MCF2L-208ENST00000397030 PLA2G4CQ9UP65 541 aa18.25■□□□□ 0.51
MCF2L-208ENST00000397030 CAMK2GQ13555 558 aaPredicted RBP18.24■□□□□ 0.51
MCF2L-208ENST00000397030 CEP70Q8NHQ1 597 aa18.24■□□□□ 0.51
MCF2L-208ENST00000397030 SENP6Q9GZR1 1112 aaPredicted RBP18.24■□□□□ 0.51
MCF2L-208ENST00000397030 SKIP12755 728 aa18.24■□□□□ 0.51
MCF2L-208ENST00000397030 NOL9Q5SY16 702 aaKnown RBP18.24■□□□□ 0.51
MCF2L-208ENST00000397030 DHX40Q8IX18 779 aaKnown RBP18.24■□□□□ 0.51
MCF2L-208ENST00000397030 KRT78Q8N1N4 520 aa18.24■□□□□ 0.51
MCF2L-208ENST00000397030 FAM151AQ8WW52 585 aa18.24■□□□□ 0.51
MCF2L-208ENST00000397030 RPS6KB2Q9UBS0 482 aa18.24■□□□□ 0.51
MCF2L-208ENST00000397030 FHOD1Q9Y613 1164 aa18.24■□□□□ 0.51
MCF2L-208ENST00000397030 ADGRL2O95490 1459 aa18.24■□□□□ 0.51
MCF2L-208ENST00000397030 PITPNM2Q9BZ72 1349 aa18.24■□□□□ 0.51
MCF2L-208ENST00000397030 CAND2O75155 1236 aa18.24■□□□□ 0.51
MCF2L-208ENST00000397030 ZC2HC1CQ53FD0 456 aaPredicted RBP18.24■□□□□ 0.51
MCF2L-208ENST00000397030 TSPAN17Q96FV3 270 aa18.24■□□□□ 0.51
MCF2L-208ENST00000397030 EXO5Q9H790 373 aa18.24■□□□□ 0.51
MCF2L-208ENST00000397030 THG1LQ9NWX6 298 aaKnown RBP18.24■□□□□ 0.51
MCF2L-208ENST00000397030 GSNP06396 782 aa18.24■□□□□ 0.51
MCF2L-208ENST00000397030 PMS1P54277 932 aaKnown RBP18.24■□□□□ 0.51
MCF2L-208ENST00000397030 SPATA18Q8TC71 538 aa18.24■□□□□ 0.51
MCF2L-208ENST00000397030 NSUN4Q96CB9 384 aaKnown RBP18.24■□□□□ 0.51
MCF2L-208ENST00000397030 ACSF2Q96CM8 615 aaPredicted RBP18.24■□□□□ 0.51
MCF2L-208ENST00000397030 CYP7B1O75881 506 aa18.24■□□□□ 0.51
MCF2L-208ENST00000397030 GABPB1Q06547 395 aaPredicted RBP18.24■□□□□ 0.51
MCF2L-208ENST00000397030 SRBD1Q8N5C6 995 aaKnown RBP18.24■□□□□ 0.51
MCF2L-208ENST00000397030 RAB6BQ9NRW1 208 aa18.24■□□□□ 0.51
MCF2L-208ENST00000397030 LGALS16A8MUM7 142 aa18.23■□□□□ 0.51
MCF2L-208ENST00000397030 CHI3L1P36222 383 aaPredicted RBP18.23■□□□□ 0.51
MCF2L-208ENST00000397030 PLIN5Q00G26 463 aa18.23■□□□□ 0.51
MCF2L-208ENST00000397030 EFEMP1Q12805 493 aa18.23■□□□□ 0.51
MCF2L-208ENST00000397030 C12orf60Q5U649 245 aa18.23■□□□□ 0.51
MCF2L-208ENST00000397030 CAMKK1Q8N5S9 505 aa18.23■□□□□ 0.51
MCF2L-208ENST00000397030 REEP2Q9BRK0 252 aa18.23■□□□□ 0.51
MCF2L-208ENST00000397030 MRPL40Q9NQ50 206 aaKnown RBP18.23■□□□□ 0.51
MCF2L-208ENST00000397030 USE1Q9NZ43 259 aa18.23■□□□□ 0.51
MCF2L-208ENST00000397030 HOXA7P31268 230 aaPredicted RBP18.23■□□□□ 0.51
MCF2L-208ENST00000397030 STARD3Q14849 445 aa18.23■□□□□ 0.51
MCF2L-208ENST00000397030 PCSK9Q8NBP7 692 aaKnown RBP18.23■□□□□ 0.51
MCF2L-208ENST00000397030 WDCPQ9H6R7 721 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms