RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 PDE9AO76083 593 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 SH2D3CQ8N5H7 860 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 DDX50Q9BQ39 737 aaKnown RBP10.78□□□□□ -0.68
COL4A4-201ENST00000396625 BTG4Q9NY30 223 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 B2RBV5 119 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 KPNA4O00629 521 aaPredicted RBP10.78□□□□□ -0.68
COL4A4-201ENST00000396625 GNAT1P11488 350 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 ARHGEF6Q15052 776 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 IP6K1Q92551 441 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 PRRG3Q9BZD7 231 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 POLR1BQ9H9Y6 1135 aa10.78□□□□□ -0.68
COL4A4-201ENST00000396625 CYP2D7A0A087X1C5 515 aa10.77□□□□□ -0.68
COL4A4-201ENST00000396625 KCNH2Q12809 1159 aa10.77□□□□□ -0.68
COL4A4-201ENST00000396625 LRRC71Q8N4P6 559 aa10.77□□□□□ -0.68
COL4A4-201ENST00000396625 MPP4Q96JB8 637 aa10.77□□□□□ -0.68
COL4A4-201ENST00000396625 NOD2Q9HC29 1040 aa10.77□□□□□ -0.68
COL4A4-201ENST00000396625 KIAA1586Q9HCI6 787 aa10.77□□□□□ -0.68
COL4A4-201ENST00000396625 RIC8BQ9NVN3 520 aa10.77□□□□□ -0.68
COL4A4-201ENST00000396625 BCL10O95999 233 aa10.77□□□□□ -0.68
COL4A4-201ENST00000396625 ATP1A1P05023 1023 aaKnown RBP10.77□□□□□ -0.68
COL4A4-201ENST00000396625 ZCCHC18P0CG32 403 aa10.77□□□□□ -0.68
COL4A4-201ENST00000396625 AP1S2P56377 157 aa10.77□□□□□ -0.68
COL4A4-201ENST00000396625 MOV10L1Q9BXT6 1211 aaKnown RBP10.77□□□□□ -0.68
COL4A4-201ENST00000396625 CAPN10Q9HC96 672 aa10.77□□□□□ -0.68
COL4A4-201ENST00000396625 CYLDQ9NQC7 956 aa10.77□□□□□ -0.68
COL4A4-201ENST00000396625 SPASTQ9UBP0 616 aa10.77□□□□□ -0.68
COL4A4-201ENST00000396625 CDC40O60508 579 aaKnown RBP eCLIP10.77□□□□□ -0.69
COL4A4-201ENST00000396625 AKR1B1P15121 316 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 NT5C2P49902 561 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 PMF1Q6P1K2 205 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 NLRP10Q86W26 655 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 MIEF2Q96C03 454 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 APOL4Q9BPW4 351 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 ZC3H4Q9UPT8 1303 aaKnown RBP10.77□□□□□ -0.69
COL4A4-201ENST00000396625 TRIM49BA6NDI0 452 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 GDF11O95390 407 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 YWHAZP63104 245 aaKnown RBP10.77□□□□□ -0.69
COL4A4-201ENST00000396625 CACHD1Q5VU97 1274 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 C4orf33Q8N1A6 199 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 AMACRQ9UHK6 382 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 DRAP1Q14919 205 aaPredicted RBP10.77□□□□□ -0.69
COL4A4-201ENST00000396625 OTOAQ7RTW8 1153 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 GIMAP8Q8ND71 665 aaPredicted RBP10.77□□□□□ -0.69
COL4A4-201ENST00000396625 SEPT1Q8WYJ6 367 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 MXD3Q9BW11 206 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 PLEKHA5Q9HAU0 1116 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 AATKQ6ZMQ8 1374 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 PHF2O75151 1096 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 DDR2Q16832 855 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 ZNF57Q68EA5 555 aaPredicted RBP10.77□□□□□ -0.69
COL4A4-201ENST00000396625 GPR101Q96P66 508 aaPredicted RBP10.77□□□□□ -0.69
COL4A4-201ENST00000396625 PPP1R2P1Q96PQ5 205 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 SPON2Q9BUD6 331 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 BHMT2Q9H2M3 363 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 DBR1Q9UK59 544 aaKnown RBP10.77□□□□□ -0.69
COL4A4-201ENST00000396625 C3orf70A6NLC5 250 aaPredicted RBP10.77□□□□□ -0.69
COL4A4-201ENST00000396625 NDUFAF6Q330K2 333 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 DPY19L2Q6NUT2 758 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 MS4A14Q96JA4 679 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 ZNF624Q9P2J8 865 aaPredicted RBP10.77□□□□□ -0.69
COL4A4-201ENST00000396625 KLHL3Q9UH77 587 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 MYL3P08590 195 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 SERPINB5P36952 375 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 POU4F1Q01851 419 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 LGALS3BPQ08380 585 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 CNTN1Q12860 1018 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 SGSM3Q96HU1 749 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 CD248Q9HCU0 757 aa10.77□□□□□ -0.69
COL4A4-201ENST00000396625 TMEM120BA0PK00 339 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 SERPINB9P50453 376 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 STX4Q12846 297 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 COASYQ13057 564 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 KBTBD12Q3ZCT8 623 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 KANSL2Q9H9L4 492 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 IARS2Q9NSE4 1012 aaKnown RBP10.76□□□□□ -0.69
COL4A4-201ENST00000396625 WDR62O43379 1518 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 SFI1A8K8P3 1242 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 ATP6V1B2P21281 511 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 CHI3L2Q15782 390 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 MFSD4BQ5TF39 518 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 KIAA0408Q6ZU52 694 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 EFL1Q7Z2Z2 1120 aaKnown RBP10.76□□□□□ -0.69
COL4A4-201ENST00000396625 HS6ST3Q8IZP7 471 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 ATL2Q8NHH9 583 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 ADAM33Q9BZ11 813 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 KLHL1Q9NR64 748 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 KIAA0556O60303 1618 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 SF3B1O75533 1304 aaKnown RBP eCLIP10.76□□□□□ -0.69
COL4A4-201ENST00000396625 SH2B2O14492 632 aaPredicted RBP10.76□□□□□ -0.69
COL4A4-201ENST00000396625 MOCS2O96007 188 aaPredicted RBP10.76□□□□□ -0.69
COL4A4-201ENST00000396625 NFICP08651 508 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 VAMP7P51809 220 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 FUT11Q495W5 492 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 LAYNQ6UX15 382 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 ARHGAP22Q7Z5H3 698 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 COMMD2Q86X83 199 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 CACTIN-AS1Q8N1I8 211 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 RFFLQ8WZ73 363 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 SMARCAL1Q9NZC9 954 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 F8W810 466 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms