RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 MMP3P08254 477 aa17.15■□□□□ 0.34
SNX6-202ENST00000396526 MMP8P22894 467 aa17.15■□□□□ 0.34
SNX6-202ENST00000396526 MAMLD1Q13495 774 aa17.15■□□□□ 0.34
SNX6-202ENST00000396526 LRIG3Q6UXM1 1119 aa17.15■□□□□ 0.34
SNX6-202ENST00000396526 PRELID2Q8N945 189 aa17.15■□□□□ 0.34
SNX6-202ENST00000396526 UBLCP1Q8WVY7 318 aaPredicted RBP17.15■□□□□ 0.34
SNX6-202ENST00000396526 CYP3A43Q9HB55 503 aa17.15■□□□□ 0.34
SNX6-202ENST00000396526 LACTBL1A8MY62 500 aa17.15■□□□□ 0.34
SNX6-202ENST00000396526 PTP4A2Q12974 167 aa17.15■□□□□ 0.34
SNX6-202ENST00000396526 CALCOCO2Q13137 446 aa17.15■□□□□ 0.34
SNX6-202ENST00000396526 IRF5Q13568 498 aa17.15■□□□□ 0.34
SNX6-202ENST00000396526 USTQ9Y2C2 406 aa17.15■□□□□ 0.34
SNX6-202ENST00000396526 NR2E1Q9Y466 385 aa17.15■□□□□ 0.34
SNX6-202ENST00000396526 MROH7Q68CQ1 1323 aa17.14■□□□□ 0.33
SNX6-202ENST00000396526 DYNC1LI2O43237 492 aaPredicted RBP17.14■□□□□ 0.33
SNX6-202ENST00000396526 ECEL1O95672 775 aa17.14■□□□□ 0.33
SNX6-202ENST00000396526 GAS8O95995 478 aa17.14■□□□□ 0.33
SNX6-202ENST00000396526 SMPD1P17405 629 aa17.14■□□□□ 0.33
SNX6-202ENST00000396526 TMEM132DQ14C87 1099 aa17.14■□□□□ 0.33
SNX6-202ENST00000396526 FAM129AQ9BZQ8 928 aa17.14■□□□□ 0.33
SNX6-202ENST00000396526 SYNCQ9H7C4 482 aa17.14■□□□□ 0.33
SNX6-202ENST00000396526 PAEPP09466 180 aa17.14■□□□□ 0.33
SNX6-202ENST00000396526 BRD2P25440 801 aaKnown RBP17.14■□□□□ 0.33
SNX6-202ENST00000396526 COILP38432 576 aaPredicted RBP17.14■□□□□ 0.33
SNX6-202ENST00000396526 DCAF4L1Q3SXM0 396 aa17.14■□□□□ 0.33
SNX6-202ENST00000396526 UBR7Q8N806 425 aa17.14■□□□□ 0.33
SNX6-202ENST00000396526 ZBTB10Q96DT7 871 aa17.14■□□□□ 0.33
SNX6-202ENST00000396526 SH3GL2Q99962 352 aa17.14■□□□□ 0.33
SNX6-202ENST00000396526 TRIM51Q9BSJ1 452 aa17.14■□□□□ 0.33
SNX6-202ENST00000396526 PCDHGC3Q9UN70 934 aa17.14■□□□□ 0.33
SNX6-202ENST00000396526 FSCN2O14926 492 aa17.14■□□□□ 0.33
SNX6-202ENST00000396526 ARF4P18085 180 aaPredicted RBP17.14■□□□□ 0.33
SNX6-202ENST00000396526 RBP5P82980 135 aa17.14■□□□□ 0.33
SNX6-202ENST00000396526 DHX9Q08211 1270 aaKnown RBP17.14■□□□□ 0.33
SNX6-202ENST00000396526 TRADDQ15628 312 aa17.14■□□□□ 0.33
SNX6-202ENST00000396526 DUPD1Q68J44 220 aa17.14■□□□□ 0.33
SNX6-202ENST00000396526 PDZD7Q9H5P4 517 aa17.14■□□□□ 0.33
SNX6-202ENST00000396526 HUNKP57058 714 aa17.13■□□□□ 0.33
SNX6-202ENST00000396526 CYP1B1Q16678 543 aa17.13■□□□□ 0.33
SNX6-202ENST00000396526 AADACL2Q6P093 401 aa17.13■□□□□ 0.33
SNX6-202ENST00000396526 LINC01465Q8N7H1 131 aa17.13■□□□□ 0.33
SNX6-202ENST00000396526 KATNBL1Q9H079 304 aa17.13■□□□□ 0.33
SNX6-202ENST00000396526 FAM124BQ9H5Z6 455 aaPredicted RBP17.13■□□□□ 0.33
SNX6-202ENST00000396526 RRAGCQ9HB90 399 aa17.13■□□□□ 0.33
SNX6-202ENST00000396526 GINS2Q9Y248 185 aa17.13■□□□□ 0.33
SNX6-202ENST00000396526 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.13■□□□□ 0.33
SNX6-202ENST00000396526 CSDE1O75534 798 aaKnown RBP17.13■□□□□ 0.33
SNX6-202ENST00000396526 ITGB3P05106 788 aa17.13■□□□□ 0.33
SNX6-202ENST00000396526 MYZAPP0CAP1 466 aa17.13■□□□□ 0.33
SNX6-202ENST00000396526 YARSP54577 528 aaKnown RBP17.13■□□□□ 0.33
SNX6-202ENST00000396526 PCBP1Q15365 356 aaKnown RBP eCLIP17.13■□□□□ 0.332e-8■■■■■ 73.5
SNX6-202ENST00000396526 C2CD6Q53TS8 623 aa17.13■□□□□ 0.33
SNX6-202ENST00000396526 SYDE1Q6ZW31 735 aaPredicted RBP17.13■□□□□ 0.33
SNX6-202ENST00000396526 C18orf8Q96DM3 657 aa17.13■□□□□ 0.33
SNX6-202ENST00000396526 CPB2Q96IY4 423 aa17.13■□□□□ 0.33
SNX6-202ENST00000396526 DNAI2Q9GZS0 605 aa17.13■□□□□ 0.33
SNX6-202ENST00000396526 MIS12Q9H081 205 aa17.13■□□□□ 0.33
SNX6-202ENST00000396526 XYLT2Q9H1B5 865 aa17.13■□□□□ 0.33
SNX6-202ENST00000396526 ERVK-5Q9HDB9 667 aa17.13■□□□□ 0.33
SNX6-202ENST00000396526 WDR35Q9P2L0 1181 aa17.13■□□□□ 0.33
SNX6-202ENST00000396526 PLAAQ9Y263 795 aa17.13■□□□□ 0.33
SNX6-202ENST00000396526 SNX24Q9Y343 169 aa17.13■□□□□ 0.33
SNX6-202ENST00000396526 C2CD2Q9Y426 696 aa17.13■□□□□ 0.33
SNX6-202ENST00000396526 SIP14410 1827 aa17.13■□□□□ 0.33
SNX6-202ENST00000396526 LRRC37A2A6NM11 1700 aa17.13■□□□□ 0.33
SNX6-202ENST00000396526 ERICH4A6NGS2 130 aa17.12■□□□□ 0.33
SNX6-202ENST00000396526 RARAP10276 462 aa17.12■□□□□ 0.33
SNX6-202ENST00000396526 SSTR3P32745 418 aaPredicted RBP17.12■□□□□ 0.33
SNX6-202ENST00000396526 PLTPP55058 493 aa17.12■□□□□ 0.33
SNX6-202ENST00000396526 IFFO1Q0D2I5 559 aa17.12■□□□□ 0.33
SNX6-202ENST00000396526 PIGHQ14442 188 aaPredicted RBP17.12■□□□□ 0.33
SNX6-202ENST00000396526 CEP85LQ5SZL2 805 aa17.12■□□□□ 0.33
SNX6-202ENST00000396526 JADE1Q6IE81 842 aa17.12■□□□□ 0.33
SNX6-202ENST00000396526 CATSPER4Q7RTX7 472 aa17.12■□□□□ 0.33
SNX6-202ENST00000396526 C1orf131Q8NDD1 294 aaKnown RBP17.12■□□□□ 0.33
SNX6-202ENST00000396526 RBM41Q96IZ5 413 aaKnown RBP17.12■□□□□ 0.33
SNX6-202ENST00000396526 LRRC19Q9H756 370 aa17.12■□□□□ 0.33
SNX6-202ENST00000396526 ITGA11Q9UKX5 1188 aa17.12■□□□□ 0.33
SNX6-202ENST00000396526 NRCAMQ92823 1304 aa17.12■□□□□ 0.33
SNX6-202ENST00000396526 NFICP08651 508 aa17.12■□□□□ 0.33
SNX6-202ENST00000396526 MYO1EQ12965 1108 aa17.12■□□□□ 0.33
SNX6-202ENST00000396526 SPDYCQ5MJ68 293 aa17.12■□□□□ 0.33
SNX6-202ENST00000396526 AP5M1Q9H0R1 490 aa17.12■□□□□ 0.33
SNX6-202ENST00000396526 MANSC4A6NHS7 340 aaPredicted RBP17.12■□□□□ 0.33
SNX6-202ENST00000396526 BHMG1C9JSJ3 638 aaPredicted RBP17.12■□□□□ 0.33
SNX6-202ENST00000396526 HOXD8P13378 290 aaPredicted RBP17.12■□□□□ 0.33
SNX6-202ENST00000396526 MAP2K5Q13163 448 aa17.12■□□□□ 0.33
SNX6-202ENST00000396526 ARFGAP2Q8N6H7 521 aa17.12■□□□□ 0.33
SNX6-202ENST00000396526 C1orf127Q8N9H9 656 aa17.12■□□□□ 0.33
SNX6-202ENST00000396526 C12orf50Q8NA57 414 aaPredicted RBP17.12■□□□□ 0.33
SNX6-202ENST00000396526 TSPYL1Q9H0U9 437 aa17.12■□□□□ 0.33
SNX6-202ENST00000396526 LHX5Q9H2C1 402 aa17.12■□□□□ 0.33
SNX6-202ENST00000396526 CWC15Q9P013 229 aaKnown RBP17.12■□□□□ 0.33
SNX6-202ENST00000396526 CPA4Q9UI42 421 aa17.12■□□□□ 0.33
SNX6-202ENST00000396526 AGAP1Q9UPQ3 857 aa17.12■□□□□ 0.33
SNX6-202ENST00000396526 A0A1B0GUA9 196 aa17.11■□□□□ 0.33
SNX6-202ENST00000396526 HSD17B3P37058 310 aa17.11■□□□□ 0.33
SNX6-202ENST00000396526 ASPAP45381 313 aa17.11■□□□□ 0.33
SNX6-202ENST00000396526 EIF3BP55884 814 aaKnown RBP17.11■□□□□ 0.33
SNX6-202ENST00000396526 TAF1CQ15572 869 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms