RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 SSRP1Q08945 709 aaKnown RBP10.2□□□□□ -0.78
CDRT1-204ENST00000395906 KIAA1755Q5JYT7 1200 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 HGSNATQ68CP4 663 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 RGS9BPQ6ZS82 235 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 RALYLQ86SE5 291 aaKnown RBP10.2□□□□□ -0.78
CDRT1-204ENST00000395906 MTDHQ86UE4 582 aaKnown RBP10.2□□□□□ -0.78
CDRT1-204ENST00000395906 ZNF398Q8TD17 642 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 BAP1Q92560 729 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 EDEM3Q9BZQ6 932 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 ZNF287Q9HBT7 754 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 FAM207AQ9NSI2 230 aaPredicted RBP10.2□□□□□ -0.78
CDRT1-204ENST00000395906 MRGBPQ9NV56 204 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 KIAA1257Q9ULG3 409 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 TRIM75PA6NK02 468 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 EPHB6O15197 1021 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 ITM2AO43736 263 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 EDF1O60869 148 aaKnown RBP10.2□□□□□ -0.78
CDRT1-204ENST00000395906 FGFR4P22455 802 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 TM4SF1P30408 202 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 ETV3P41162 512 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 CDK9P50750 372 aaKnown RBP10.2□□□□□ -0.78
CDRT1-204ENST00000395906 PTENP60484 403 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 RPS8P62241 208 aaKnown RBP10.2□□□□□ -0.78
CDRT1-204ENST00000395906 NTRK3Q16288 839 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 LONRF1Q17RB8 773 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 TMEM266Q2M3C6 531 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 SLC9C1Q4G0N8 1177 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 DCAF6Q58WW2 860 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 UBAP2Q5T6F2 1119 aaKnown RBP10.2□□□□□ -0.78
CDRT1-204ENST00000395906 DCLRE1AQ6PJP8 1040 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 MAMSTRQ6ZN01 415 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 CCDC84Q86UT8 332 aaPredicted RBP10.2□□□□□ -0.78
CDRT1-204ENST00000395906 OSTM1Q86WC4 334 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 IFNLR1Q8IU57 520 aaPredicted RBP10.2□□□□□ -0.78
CDRT1-204ENST00000395906 MARVELD2Q8N4S9 558 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 FAM172AQ8WUF8 416 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 SNF8Q96H20 258 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 CAMKK2Q96RR4 588 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 TCF12Q99081 682 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 CYTH2Q99418 400 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 TRIM55Q9BYV6 548 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 NYXQ9GZU5 481 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 SNX25Q9H3E2 840 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 AS3MTQ9HBK9 375 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 MAN1C1Q9NR34 630 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 ARL8BQ9NVJ2 186 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.2□□□□□ -0.78
CDRT1-204ENST00000395906 ZNF219Q9P2Y4 722 aaPredicted RBP10.2□□□□□ -0.78
CDRT1-204ENST00000395906 MINPP1Q9UNW1 487 aa10.2□□□□□ -0.78
CDRT1-204ENST00000395906 RREB1Q92766 1687 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 H3BSA7 217 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 TXNDC9O14530 226 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 USP1O94782 785 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 BMP15O95972 392 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 SERPING1P05155 500 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 KPNA1P52294 538 aaPredicted RBP10.19□□□□□ -0.78
CDRT1-204ENST00000395906 DNAJC3Q13217 504 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 DHX34Q14147 1143 aaKnown RBP10.19□□□□□ -0.78
CDRT1-204ENST00000395906 KCTD19Q17RG1 926 aaPredicted RBP10.19□□□□□ -0.78
CDRT1-204ENST00000395906 AAGABQ6PD74 315 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 TXNRD3Q86VQ6 643 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 LILRB4Q8NHJ6 448 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 MORC4Q8TE76 937 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 SCFD1Q8WVM8 642 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 SEZ6LQ9BYH1 1024 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 ZNF696Q9H7X3 374 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 RIC8AQ9NPQ8 531 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 TAS2R1Q9NYW7 299 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 IFT52Q9Y366 437 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 UBR3Q6ZT12 1888 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 POLRMTO00411 1230 aaKnown RBP10.19□□□□□ -0.78
CDRT1-204ENST00000395906 KIAA0391O15091 583 aaKnown RBP10.19□□□□□ -0.78
CDRT1-204ENST00000395906 CD48P09326 243 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 MUTP22033 750 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 IL4RP24394 825 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 AQP4P55087 323 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 ACTR3P61158 418 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 ARHGAP4P98171 946 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 NONOQ15233 471 aaKnown RBP eCLIP10.19□□□□□ -0.78
CDRT1-204ENST00000395906 SF3B4Q15427 424 aaKnown RBP eCLIP10.19□□□□□ -0.78
CDRT1-204ENST00000395906 ZNF829Q3KNS6 432 aaPredicted RBP10.19□□□□□ -0.78
CDRT1-204ENST00000395906 HERC4Q5GLZ8 1057 aaPredicted RBP10.19□□□□□ -0.78
CDRT1-204ENST00000395906 RIPOR1Q6ZS17 1223 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 TRMT10CQ7L0Y3 403 aaKnown RBP10.19□□□□□ -0.78
CDRT1-204ENST00000395906 CYP2U1Q7Z449 544 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 DHDDSQ86SQ9 333 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 ENAHQ8N8S7 591 aaPredicted RBP10.19□□□□□ -0.78
CDRT1-204ENST00000395906 MIGA1Q8NAN2 632 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 PDZD8Q8NEN9 1154 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 CCDC138Q96M89 665 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 FAM161BQ96MY7 647 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 SPZ1Q9BXG8 430 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 SLC26A6Q9BXS9 759 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 MMRN2Q9H8L6 949 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 ARMCX3Q9UH62 379 aaPredicted RBP10.19□□□□□ -0.78
CDRT1-204ENST00000395906 PPM1HQ9ULR3 514 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 DNAJC16Q9Y2G8 782 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 SNX24Q9Y343 169 aa10.19□□□□□ -0.78
CDRT1-204ENST00000395906 PFASO15067 1338 aa10.18□□□□□ -0.78
CDRT1-204ENST00000395906 ADGRA3Q8IWK6 1321 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms