RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 MED7O43513 233 aa14.62□□□□□ -0.07
VAPB-202ENST00000395802 TRAPPC3O43617 180 aa14.62□□□□□ -0.07
VAPB-202ENST00000395802 TACC1O75410 805 aa14.62□□□□□ -0.07
VAPB-202ENST00000395802 B3GAT3O94766 335 aa14.62□□□□□ -0.07
VAPB-202ENST00000395802 LCA5LO95447 670 aa14.62□□□□□ -0.07
VAPB-202ENST00000395802 PAEPP09466 180 aa14.62□□□□□ -0.07
VAPB-202ENST00000395802 WEE2P0C1S8 567 aa14.62□□□□□ -0.07
VAPB-202ENST00000395802 FGFR1P11362 822 aa14.62□□□□□ -0.07
VAPB-202ENST00000395802 CD58P19256 250 aa14.62□□□□□ -0.07
VAPB-202ENST00000395802 INCA1Q0VD86 236 aa14.62□□□□□ -0.07
VAPB-202ENST00000395802 PSRC1Q6PGN9 363 aaPredicted RBP14.62□□□□□ -0.07
VAPB-202ENST00000395802 SCARA5Q6ZMJ2 495 aa14.62□□□□□ -0.07
VAPB-202ENST00000395802 UNC93AQ86WB7 457 aa14.62□□□□□ -0.07
VAPB-202ENST00000395802 TMEM86AQ8N2M4 240 aa14.62□□□□□ -0.07
VAPB-202ENST00000395802 LRRC43Q8N309 656 aa14.62□□□□□ -0.07
VAPB-202ENST00000395802 RBBP8NLQ8NC74 664 aaPredicted RBP14.62□□□□□ -0.07
VAPB-202ENST00000395802 SPATA18Q8TC71 538 aa14.62□□□□□ -0.07
VAPB-202ENST00000395802 C16orf45Q96MC5 204 aaPredicted RBP14.62□□□□□ -0.07
VAPB-202ENST00000395802 AGPAT1Q99943 283 aa14.62□□□□□ -0.07
VAPB-202ENST00000395802 GOLGA2P5Q9HBQ8 144 aa14.62□□□□□ -0.07
VAPB-202ENST00000395802 TBC1D13Q9NVG8 400 aa14.62□□□□□ -0.07
VAPB-202ENST00000395802 ADAMTS1Q9UHI8 967 aa14.62□□□□□ -0.07
VAPB-202ENST00000395802 DSEQ9UL01 958 aa14.62□□□□□ -0.07
VAPB-202ENST00000395802 PPP2R2CQ9Y2T4 447 aa14.62□□□□□ -0.07
VAPB-202ENST00000395802 CASTOR2A6NHX0 329 aa14.61□□□□□ -0.07
VAPB-202ENST00000395802 RBAK-RBAKDNI3L0D1 243 aa14.61□□□□□ -0.07
VAPB-202ENST00000395802 ITGB8P26012 769 aa14.61□□□□□ -0.07
VAPB-202ENST00000395802 GNA15P30679 374 aa14.61□□□□□ -0.07
VAPB-202ENST00000395802 AFF1P51825 1210 aaKnown RBP14.61□□□□□ -0.07
VAPB-202ENST00000395802 DSC1Q08554 894 aa14.61□□□□□ -0.07
VAPB-202ENST00000395802 SCN5AQ14524 2016 aa14.61□□□□□ -0.07
VAPB-202ENST00000395802 ASTE1Q2TB18 679 aaPredicted RBP14.61□□□□□ -0.07
VAPB-202ENST00000395802 DSTYKQ6XUX3 929 aa14.61□□□□□ -0.07
VAPB-202ENST00000395802 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.61□□□□□ -0.07
VAPB-202ENST00000395802 ZNF571Q7Z3V5 609 aaPredicted RBP14.61□□□□□ -0.07
VAPB-202ENST00000395802 SLC47A2Q86VL8 602 aa14.61□□□□□ -0.07
VAPB-202ENST00000395802 CRIPAKQ8N1N5 446 aa14.61□□□□□ -0.07
VAPB-202ENST00000395802 UBR7Q8N806 425 aa14.61□□□□□ -0.07
VAPB-202ENST00000395802 EPS8L1Q8TE68 723 aa14.61□□□□□ -0.07
VAPB-202ENST00000395802 TOP1MTQ969P6 601 aa14.61□□□□□ -0.07
VAPB-202ENST00000395802 NT5C1AQ9BXI3 368 aa14.61□□□□□ -0.07
VAPB-202ENST00000395802 PDCL3Q9H2J4 239 aa14.61□□□□□ -0.07
VAPB-202ENST00000395802 RNF19AQ9NV58 838 aa14.61□□□□□ -0.07
VAPB-202ENST00000395802 POLIQ9UNA4 740 aa14.61□□□□□ -0.07
VAPB-202ENST00000395802 TET1Q8NFU7 2136 aa14.6□□□□□ -0.07
VAPB-202ENST00000395802 TMEM189-UBE2V1I3L0A0 370 aa14.6□□□□□ -0.07
VAPB-202ENST00000395802 CILPO75339 1184 aa14.6□□□□□ -0.07
VAPB-202ENST00000395802 FGBP02675 491 aa14.6□□□□□ -0.07
VAPB-202ENST00000395802 ALDH2P05091 517 aa14.6□□□□□ -0.07
VAPB-202ENST00000395802 PLEKP08567 350 aaPredicted RBP14.6□□□□□ -0.07
VAPB-202ENST00000395802 PNMA6AP0CW24 399 aaPredicted RBP14.6□□□□□ -0.07
VAPB-202ENST00000395802 ZNF132P52740 706 aa14.6□□□□□ -0.07
VAPB-202ENST00000395802 CDR2Q01850 454 aa14.6□□□□□ -0.07
VAPB-202ENST00000395802 TRIM72Q6ZMU5 477 aa14.6□□□□□ -0.07
VAPB-202ENST00000395802 REXO1L1PQ8IX06 675 aa14.6□□□□□ -0.07
VAPB-202ENST00000395802 C7orf61Q8IZ16 206 aa14.6□□□□□ -0.07
VAPB-202ENST00000395802 TMEM176AQ96HP8 235 aa14.6□□□□□ -0.07
VAPB-202ENST00000395802 CASD1Q96PB1 797 aa14.6□□□□□ -0.07
VAPB-202ENST00000395802 TMEM175Q9BSA9 504 aa14.6□□□□□ -0.07
VAPB-202ENST00000395802 DESI2Q9BSY9 194 aa14.6□□□□□ -0.07
VAPB-202ENST00000395802 TSGA10Q9BZW7 698 aa14.6□□□□□ -0.07
VAPB-202ENST00000395802 MTIF3Q9H2K0 278 aaKnown RBP14.6□□□□□ -0.07
VAPB-202ENST00000395802 SNX25Q9H3E2 840 aa14.6□□□□□ -0.07
VAPB-202ENST00000395802 SMYD3Q9H7B4 428 aa14.6□□□□□ -0.07
VAPB-202ENST00000395802 SEPT11Q9NVA2 429 aaKnown RBP14.6□□□□□ -0.07
VAPB-202ENST00000395802 CEP83Q9Y592 693 aa14.6□□□□□ -0.07
VAPB-202ENST00000395802 ADGRG1Q9Y653 693 aa14.6□□□□□ -0.07
VAPB-202ENST00000395802 MKI67P46013 3256 aaKnown RBP14.59□□□□□ -0.07
VAPB-202ENST00000395802 TDRD15B5MCY1 1934 aaKnown RBP14.59□□□□□ -0.07
VAPB-202ENST00000395802 CYB561D2O14569 222 aa14.59□□□□□ -0.07
VAPB-202ENST00000395802 PPEF2O14830 753 aa14.59□□□□□ -0.07
VAPB-202ENST00000395802 KIF4AO95239 1232 aa14.59□□□□□ -0.07
VAPB-202ENST00000395802 ODC1P11926 461 aa14.59□□□□□ -0.07
VAPB-202ENST00000395802 LHX1P48742 406 aa14.59□□□□□ -0.07
VAPB-202ENST00000395802 STILQ15468 1287 aa14.59□□□□□ -0.07
VAPB-202ENST00000395802 KIAA1328Q86T90 577 aa14.59□□□□□ -0.07
VAPB-202ENST00000395802 METTL23Q86XA0 190 aa14.59□□□□□ -0.07
VAPB-202ENST00000395802 COLGALT2Q8IYK4 626 aa14.59□□□□□ -0.07
VAPB-202ENST00000395802 ELMO3Q96BJ8 720 aa14.59□□□□□ -0.07
VAPB-202ENST00000395802 ABHD8Q96I13 439 aa14.59□□□□□ -0.07
VAPB-202ENST00000395802 LBHD1Q9BQE6 289 aaPredicted RBP14.59□□□□□ -0.07
VAPB-202ENST00000395802 COLEC11Q9BWP8 271 aa14.59□□□□□ -0.07
VAPB-202ENST00000395802 TBKBP1A7MCY6 615 aa14.59□□□□□ -0.07
VAPB-202ENST00000395802 DGKIO75912 1065 aa14.59□□□□□ -0.07
VAPB-202ENST00000395802 GZMAP12544 262 aa14.59□□□□□ -0.07
VAPB-202ENST00000395802 GNL1P36915 607 aaPredicted RBP14.59□□□□□ -0.07
VAPB-202ENST00000395802 AARSP49588 968 aaKnown RBP eCLIP14.59□□□□□ -0.07
VAPB-202ENST00000395802 GFPT1Q06210 699 aaPredicted RBP14.59□□□□□ -0.07
VAPB-202ENST00000395802 SOWAHAQ2M3V2 549 aa14.59□□□□□ -0.07
VAPB-202ENST00000395802 SCARA3Q6AZY7 606 aa14.59□□□□□ -0.07
VAPB-202ENST00000395802 ALKBH5Q6P6C2 394 aaKnown RBP14.59□□□□□ -0.07
VAPB-202ENST00000395802 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.59□□□□□ -0.07
VAPB-202ENST00000395802 ADGRF2Q8IZF7 708 aa14.59□□□□□ -0.07
VAPB-202ENST00000395802 OR6B3Q8NGW1 331 aa14.59□□□□□ -0.07
VAPB-202ENST00000395802 BADQ92934 168 aa14.59□□□□□ -0.07
VAPB-202ENST00000395802 TNIP3Q96KP6 325 aa14.59□□□□□ -0.07
VAPB-202ENST00000395802 PUF60Q9UHX1 559 aaKnown RBP14.59□□□□□ -0.07
VAPB-202ENST00000395802 NOCTQ9UK39 431 aaKnown RBP14.59□□□□□ -0.07
VAPB-202ENST00000395802 MICAL3Q7RTP6 2002 aa14.59□□□□□ -0.07
VAPB-202ENST00000395802 ATP8B3O60423 1300 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms