RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 SLC25A27O95847 323 aa6.48□□□□□ -1.37
AP3S1-202ENST00000395548 LCP1P13796 627 aa6.48□□□□□ -1.37
AP3S1-202ENST00000395548 GRIA2P42262 883 aa6.48□□□□□ -1.37
AP3S1-202ENST00000395548 IRX6P78412 446 aaPredicted RBP6.48□□□□□ -1.37
AP3S1-202ENST00000395548 SERINC3Q13530 473 aa6.48□□□□□ -1.37
AP3S1-202ENST00000395548 CCDC57Q2TAC2 916 aa6.48□□□□□ -1.37
AP3S1-202ENST00000395548 PLEKHG4Q58EX7 1191 aa6.48□□□□□ -1.37
AP3S1-202ENST00000395548 HSP90AB4PQ58FF6 505 aa6.48□□□□□ -1.37
AP3S1-202ENST00000395548 EMC4Q5J8M3 183 aa6.48□□□□□ -1.37
AP3S1-202ENST00000395548 CC2D1BQ5T0F9 858 aaKnown RBP6.48□□□□□ -1.37
AP3S1-202ENST00000395548 N4BP2L1Q5TBK1 243 aaPredicted RBP6.48□□□□□ -1.37
AP3S1-202ENST00000395548 CXCL17Q6UXB2 119 aa6.48□□□□□ -1.37
AP3S1-202ENST00000395548 RSPO2Q6UXX9 243 aaPredicted RBP6.48□□□□□ -1.37
AP3S1-202ENST00000395548 ZNF761Q86XN6 746 aaPredicted RBP6.48□□□□□ -1.37
AP3S1-202ENST00000395548 FMNL3Q8IVF7 1028 aa6.48□□□□□ -1.37
AP3S1-202ENST00000395548 ADAMTS17Q8TE56 1095 aa6.48□□□□□ -1.37
AP3S1-202ENST00000395548 SRPK1Q96SB4 655 aaKnown RBP6.48□□□□□ -1.37
AP3S1-202ENST00000395548 FEZ1Q99689 392 aa6.48□□□□□ -1.37
AP3S1-202ENST00000395548 IER2Q9BTL4 223 aa6.48□□□□□ -1.37
AP3S1-202ENST00000395548 BDH2Q9BUT1 245 aa6.48□□□□□ -1.37
AP3S1-202ENST00000395548 ALDH8A1Q9H2A2 487 aaPredicted RBP6.48□□□□□ -1.37
AP3S1-202ENST00000395548 PNNQ9H307 717 aaKnown RBP6.48□□□□□ -1.37
AP3S1-202ENST00000395548 SIRPGQ9P1W8 387 aa6.48□□□□□ -1.37
AP3S1-202ENST00000395548 FBXL7Q9UJT9 491 aa6.48□□□□□ -1.37
AP3S1-202ENST00000395548 ZHX1Q9UKY1 873 aaPredicted RBP6.48□□□□□ -1.37
AP3S1-202ENST00000395548 CNOT11Q9UKZ1 510 aaKnown RBP6.48□□□□□ -1.37
AP3S1-202ENST00000395548 PCDHB4Q9Y5E5 795 aa6.48□□□□□ -1.37
AP3S1-202ENST00000395548 ZNF462Q96JM2 2506 aa6.48□□□□□ -1.37
AP3S1-202ENST00000395548 MYO18BQ8IUG5 2567 aa6.47□□□□□ -1.37
AP3S1-202ENST00000395548 KRIT1O00522 736 aa6.47□□□□□ -1.37
AP3S1-202ENST00000395548 PI15O43692 258 aa6.47□□□□□ -1.37
AP3S1-202ENST00000395548 TADA3O75528 432 aa6.47□□□□□ -1.37
AP3S1-202ENST00000395548 IGKV5-2P06315 115 aa6.47□□□□□ -1.37
AP3S1-202ENST00000395548 RB1P06400 928 aa6.47□□□□□ -1.37
AP3S1-202ENST00000395548 SP9P0CG40 484 aa6.47□□□□□ -1.37
AP3S1-202ENST00000395548 CYP2C9P11712 490 aa6.47□□□□□ -1.37
AP3S1-202ENST00000395548 STAT5AP42229 794 aa6.47□□□□□ -1.37
AP3S1-202ENST00000395548 ITGA1P56199 1179 aa6.47□□□□□ -1.37
AP3S1-202ENST00000395548 DEFB103AP81534 67 aa6.47□□□□□ -1.37
AP3S1-202ENST00000395548 PLS1Q14651 629 aa6.47□□□□□ -1.37
AP3S1-202ENST00000395548 FAM26FQ5R3K3 315 aa6.47□□□□□ -1.37
AP3S1-202ENST00000395548 TMCO2Q7Z6W1 182 aaPredicted RBP6.47□□□□□ -1.37
AP3S1-202ENST00000395548 FAM124AQ86V42 546 aa6.47□□□□□ -1.37
AP3S1-202ENST00000395548 EFHBQ8N7U6 833 aa6.47□□□□□ -1.37
AP3S1-202ENST00000395548 PRPF38AQ8NAV1 312 aaKnown RBP6.47□□□□□ -1.37
AP3S1-202ENST00000395548 ST13P5Q8NFI4 369 aaPredicted RBP6.47□□□□□ -1.37
AP3S1-202ENST00000395548 PHOSPHO1Q8TCT1 267 aa6.47□□□□□ -1.37
AP3S1-202ENST00000395548 TOE1Q96GM8 510 aaKnown RBP6.47□□□□□ -1.37
AP3S1-202ENST00000395548 AARSD1Q9BTE6 412 aaKnown RBP6.47□□□□□ -1.37
AP3S1-202ENST00000395548 GMEB2Q9UKD1 530 aa6.47□□□□□ -1.37
AP3S1-202ENST00000395548 MAP3K2Q9Y2U5 619 aa6.47□□□□□ -1.37
AP3S1-202ENST00000395548 TCRBV5S2A0A599 114 aa6.46□□□□□ -1.38
AP3S1-202ENST00000395548 FSD2A1L4K1 749 aa6.46□□□□□ -1.38
AP3S1-202ENST00000395548 LINC01565O15544 149 aa6.46□□□□□ -1.38
AP3S1-202ENST00000395548 DLX3O60479 287 aa6.46□□□□□ -1.38
AP3S1-202ENST00000395548 KRT38O76015 456 aa6.46□□□□□ -1.38
AP3S1-202ENST00000395548 HTRA4P83105 476 aaPredicted RBP6.46□□□□□ -1.38
AP3S1-202ENST00000395548 ACVR2BQ13705 512 aa6.46□□□□□ -1.38
AP3S1-202ENST00000395548 COG2Q14746 738 aa6.46□□□□□ -1.38
AP3S1-202ENST00000395548 RALBP1Q15311 655 aa6.46□□□□□ -1.38
AP3S1-202ENST00000395548 CR1LQ2VPA4 569 aa6.46□□□□□ -1.38
AP3S1-202ENST00000395548 IL31Q6EBC2 164 aa6.46□□□□□ -1.38
AP3S1-202ENST00000395548 USP53Q70EK8 1073 aa6.46□□□□□ -1.38
AP3S1-202ENST00000395548 APBB1IPQ7Z5R6 666 aaPredicted RBP6.46□□□□□ -1.38
AP3S1-202ENST00000395548 FERMT3Q86UX7 667 aa6.46□□□□□ -1.38
AP3S1-202ENST00000395548 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.46□□□□□ -1.38
AP3S1-202ENST00000395548 STAG1Q8WVM7 1258 aa6.46□□□□□ -1.38
AP3S1-202ENST00000395548 RIN2Q8WYP3 895 aaPredicted RBP6.46□□□□□ -1.38
AP3S1-202ENST00000395548 SYT3Q9BQG1 590 aa6.46□□□□□ -1.38
AP3S1-202ENST00000395548 TRIM55Q9BYV6 548 aa6.46□□□□□ -1.38
AP3S1-202ENST00000395548 UBA5Q9GZZ9 404 aa6.46□□□□□ -1.38
AP3S1-202ENST00000395548 ABHD16BQ9H3Z7 469 aa6.46□□□□□ -1.38
AP3S1-202ENST00000395548 SMOC1Q9H4F8 434 aa6.46□□□□□ -1.38
AP3S1-202ENST00000395548 DDX4Q9NQI0 724 aaKnown RBP6.46□□□□□ -1.38
AP3S1-202ENST00000395548 DTLQ9NZJ0 730 aa6.46□□□□□ -1.38
AP3S1-202ENST00000395548 GRIN2DO15399 1336 aa6.46□□□□□ -1.38
AP3S1-202ENST00000395548 TEP1Q99973 2627 aaKnown RBP6.46□□□□□ -1.38
AP3S1-202ENST00000395548 CNOT1A5YKK6 2376 aaKnown RBP6.45□□□□□ -1.38
AP3S1-202ENST00000395548 TENM4Q6N022 2769 aa6.45□□□□□ -1.38
AP3S1-202ENST00000395548 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.45□□□□□ -1.38
AP3S1-202ENST00000395548 ARHGAP6O43182 974 aa6.45□□□□□ -1.38
AP3S1-202ENST00000395548 CREB3O43889 395 aa6.45□□□□□ -1.38
AP3S1-202ENST00000395548 CYP7B1O75881 506 aa6.45□□□□□ -1.38
AP3S1-202ENST00000395548 PGK2P07205 417 aa6.45□□□□□ -1.38
AP3S1-202ENST00000395548 PDGFRBP09619 1106 aa6.45□□□□□ -1.38
AP3S1-202ENST00000395548 VCAM1P19320 739 aa6.45□□□□□ -1.38
AP3S1-202ENST00000395548 CNR2P34972 360 aa6.45□□□□□ -1.38
AP3S1-202ENST00000395548 TBX4P57082 545 aa6.45□□□□□ -1.38
AP3S1-202ENST00000395548 BEX3Q00994 111 aa6.45□□□□□ -1.38
AP3S1-202ENST00000395548 LMOD3Q0VAK6 560 aa6.45□□□□□ -1.38
AP3S1-202ENST00000395548 RAB33AQ14088 237 aa6.45□□□□□ -1.38
AP3S1-202ENST00000395548 RRP1BQ14684 758 aaKnown RBP6.45□□□□□ -1.38
AP3S1-202ENST00000395548 FSCN1Q16658 493 aaKnown RBP6.45□□□□□ -1.38
AP3S1-202ENST00000395548 KRT24Q2M2I5 525 aa6.45□□□□□ -1.38
AP3S1-202ENST00000395548 SPATS1Q496A3 300 aa6.45□□□□□ -1.38
AP3S1-202ENST00000395548 MAMDC4Q6UXC1 1216 aa6.45□□□□□ -1.38
AP3S1-202ENST00000395548 KSR2Q6VAB6 950 aa6.45□□□□□ -1.38
AP3S1-202ENST00000395548 STK32CQ86UX6 486 aa6.45□□□□□ -1.38
AP3S1-202ENST00000395548 TRIM48Q8IWZ4 208 aa6.45□□□□□ -1.38
AP3S1-202ENST00000395548 LRRC47Q8N1G4 583 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms