RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 FZD5Q13467 585 aa20.89■□□□□ 0.93
COL11A2-204ENST00000395194 ZC2HC1CQ53FD0 456 aaPredicted RBP20.89■□□□□ 0.93
COL11A2-204ENST00000395194 SPATA1Q5VX52 437 aa20.89■□□□□ 0.93
COL11A2-204ENST00000395194 TMC8Q8IU68 726 aa20.89■□□□□ 0.93
COL11A2-204ENST00000395194 ATAD1Q8NBU5 361 aa20.89■□□□□ 0.93
COL11A2-204ENST00000395194 LEMD2Q8NC56 503 aa20.89■□□□□ 0.93
COL11A2-204ENST00000395194 LARP4BQ92615 738 aaKnown RBP20.89■□□□□ 0.93
COL11A2-204ENST00000395194 RUBCNQ92622 972 aa20.89■□□□□ 0.93
COL11A2-204ENST00000395194 IRF7Q92985 503 aa20.89■□□□□ 0.93
COL11A2-204ENST00000395194 RMDN1Q96DB5 314 aa20.89■□□□□ 0.93
COL11A2-204ENST00000395194 RSPRY1Q96DX4 576 aa20.89■□□□□ 0.93
COL11A2-204ENST00000395194 SENP8Q96LD8 212 aa20.89■□□□□ 0.93
COL11A2-204ENST00000395194 FIZ1Q96SL8 496 aa20.89■□□□□ 0.93
COL11A2-204ENST00000395194 NELL2Q99435 816 aa20.89■□□□□ 0.93
COL11A2-204ENST00000395194 IKZF4Q9H2S9 585 aa20.89■□□□□ 0.93
COL11A2-204ENST00000395194 UPF2Q9HAU5 1272 aaKnown RBP20.89■□□□□ 0.93
COL11A2-204ENST00000395194 CPSF3Q9UKF6 684 aaKnown RBP20.89■□□□□ 0.93
COL11A2-204ENST00000395194 MAFFQ9ULX9 164 aa20.89■□□□□ 0.93
COL11A2-204ENST00000395194 PIAS3Q9Y6X2 628 aa20.89■□□□□ 0.93
COL11A2-204ENST00000395194 A0A0B4J269 797 aa20.88■□□□□ 0.93
COL11A2-204ENST00000395194 MTMR11A4FU01 709 aa20.88■□□□□ 0.93
COL11A2-204ENST00000395194 VPS37CA5D8V6 355 aaPredicted RBP20.88■□□□□ 0.93
COL11A2-204ENST00000395194 OR6C75A6NL08 312 aa20.88■□□□□ 0.93
COL11A2-204ENST00000395194 HEPACAM2A8MVW5 462 aa20.88■□□□□ 0.93
COL11A2-204ENST00000395194 TULP1O00294 542 aaPredicted RBP20.88■□□□□ 0.93
COL11A2-204ENST00000395194 SLC26A4O43511 780 aa20.88■□□□□ 0.93
COL11A2-204ENST00000395194 ODC1P11926 461 aa20.88■□□□□ 0.93
COL11A2-204ENST00000395194 LONP1P36776 959 aaKnown RBP20.88■□□□□ 0.93
COL11A2-204ENST00000395194 EPHB3P54753 998 aa20.88■□□□□ 0.93
COL11A2-204ENST00000395194 LILRA4P59901 499 aa20.88■□□□□ 0.93
COL11A2-204ENST00000395194 GPR17Q13304 367 aa20.88■□□□□ 0.93
COL11A2-204ENST00000395194 PLD1Q13393 1074 aa20.88■□□□□ 0.93
COL11A2-204ENST00000395194 TMEM132DQ14C87 1099 aa20.88■□□□□ 0.93
COL11A2-204ENST00000395194 KYAT1Q16773 422 aa20.88■□□□□ 0.93
COL11A2-204ENST00000395194 ZNF528Q3MIS6 628 aa20.88■□□□□ 0.93
COL11A2-204ENST00000395194 C9orf57Q5W0N0 161 aa20.88■□□□□ 0.93
COL11A2-204ENST00000395194 MAP4K3Q8IVH8 894 aa20.88■□□□□ 0.93
COL11A2-204ENST00000395194 ATRIPQ8WXE1 791 aa20.88■□□□□ 0.93
COL11A2-204ENST00000395194 LRRC3Q9BY71 257 aa20.88■□□□□ 0.93
COL11A2-204ENST00000395194 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.88■□□□□ 0.93
COL11A2-204ENST00000395194 SPTBN2O15020 2390 aa20.87■□□□□ 0.93
COL11A2-204ENST00000395194 ZNF263O14978 683 aa20.87■□□□□ 0.93
COL11A2-204ENST00000395194 TYMPP19971 482 aa20.87■□□□□ 0.93
COL11A2-204ENST00000395194 RPS9P46781 194 aaKnown RBP20.87■□□□□ 0.93
COL11A2-204ENST00000395194 ALDH1A3P47895 512 aa20.87■□□□□ 0.93
COL11A2-204ENST00000395194 ADALQ6DHV7 355 aa20.87■□□□□ 0.93
COL11A2-204ENST00000395194 CENPPQ6IPU0 288 aa20.87■□□□□ 0.93
COL11A2-204ENST00000395194 USP49Q70CQ1 688 aa20.87■□□□□ 0.93
COL11A2-204ENST00000395194 DYMQ7RTS9 669 aa20.87■□□□□ 0.93
COL11A2-204ENST00000395194 OR10T2Q8NGX3 314 aa20.87■□□□□ 0.93
COL11A2-204ENST00000395194 DEPDC1BQ8WUY9 529 aa20.87■□□□□ 0.93
COL11A2-204ENST00000395194 FAM3CQ92520 227 aa20.87■□□□□ 0.93
COL11A2-204ENST00000395194 KCNN1Q92952 543 aa20.87■□□□□ 0.93
COL11A2-204ENST00000395194 EPSTI1Q96J88 318 aa20.87■□□□□ 0.93
COL11A2-204ENST00000395194 MAN2B1O00754 1011 aa20.86■□□□□ 0.93
COL11A2-204ENST00000395194 BMP15O95972 392 aa20.86■□□□□ 0.93
COL11A2-204ENST00000395194 CENPBP07199 599 aaPredicted RBP20.86■□□□□ 0.93
COL11A2-204ENST00000395194 ADRB2P07550 413 aa20.86■□□□□ 0.93
COL11A2-204ENST00000395194 MCM2P49736 904 aa20.86■□□□□ 0.93
COL11A2-204ENST00000395194 GTF2BQ00403 316 aa20.86■□□□□ 0.93
COL11A2-204ENST00000395194 FOXK2Q01167 660 aa20.86■□□□□ 0.93
COL11A2-204ENST00000395194 ARMCX5Q6P1M9 558 aa20.86■□□□□ 0.93
COL11A2-204ENST00000395194 ERMP1Q7Z2K6 904 aa20.86■□□□□ 0.93
COL11A2-204ENST00000395194 BRAPQ7Z569 592 aa20.86■□□□□ 0.93
COL11A2-204ENST00000395194 SFR1Q86XK3 245 aa20.86■□□□□ 0.93
COL11A2-204ENST00000395194 MFSD6LQ8IWD5 586 aa20.86■□□□□ 0.93
COL11A2-204ENST00000395194 YAF2Q8IY57 180 aa20.86■□□□□ 0.93
COL11A2-204ENST00000395194 LPIN3Q9BQK8 851 aa20.86■□□□□ 0.93
COL11A2-204ENST00000395194 OXCT2Q9BYC2 517 aaPredicted RBP20.86■□□□□ 0.93
COL11A2-204ENST00000395194 ZSCAN32Q9NX65 697 aa20.86■□□□□ 0.93
COL11A2-204ENST00000395194 NCDNQ9UBB6 729 aa20.86■□□□□ 0.93
COL11A2-204ENST00000395194 PCDHGA2Q9Y5H1 932 aa20.86■□□□□ 0.93
COL11A2-204ENST00000395194 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.86■□□□□ 0.93
COL11A2-204ENST00000395194 CLIC4Q9Y696 253 aa20.86■□□□□ 0.93
COL11A2-204ENST00000395194 DENND4CQ5VZ89 1909 aa20.86■□□□□ 0.93
COL11A2-204ENST00000395194 SOX9P48436 509 aa20.85■□□□□ 0.93
COL11A2-204ENST00000395194 MYBPC2Q14324 1141 aa20.85■□□□□ 0.93
COL11A2-204ENST00000395194 SLC39A12Q504Y0 691 aa20.85■□□□□ 0.93
COL11A2-204ENST00000395194 ZNF687Q8N1G0 1237 aa20.85■□□□□ 0.93
COL11A2-204ENST00000395194 TTC8Q8TAM2 541 aa20.85■□□□□ 0.93
COL11A2-204ENST00000395194 FAM200AQ8TCP9 573 aa20.85■□□□□ 0.93
COL11A2-204ENST00000395194 SEPT5Q99719 369 aaPredicted RBP20.85■□□□□ 0.93
COL11A2-204ENST00000395194 CHRDQ9H2X0 955 aa20.85■□□□□ 0.93
COL11A2-204ENST00000395194 ATXN3LQ9H3M9 355 aa20.85■□□□□ 0.93
COL11A2-204ENST00000395194 LMAN1LQ9HAT1 526 aa20.85■□□□□ 0.93
COL11A2-204ENST00000395194 TRPV4Q9HBA0 871 aa20.85■□□□□ 0.93
COL11A2-204ENST00000395194 PRMT8Q9NR22 394 aaPredicted RBP20.85■□□□□ 0.93
COL11A2-204ENST00000395194 AGO2Q9UKV8 859 aaKnown RBP20.85■□□□□ 0.93
COL11A2-204ENST00000395194 SMG5Q9UPR3 1016 aaKnown RBP20.85■□□□□ 0.93
COL11A2-204ENST00000395194 ATG2BQ96BY7 2078 aa20.85■□□□□ 0.93
COL11A2-204ENST00000395194 SLC38A8A6NNN8 435 aa20.84■□□□□ 0.93
COL11A2-204ENST00000395194 PIRO00625 290 aa20.84■□□□□ 0.93
COL11A2-204ENST00000395194 CCNE1P24864 410 aa20.84■□□□□ 0.93
COL11A2-204ENST00000395194 GABRR2P28476 465 aa20.84■□□□□ 0.93
COL11A2-204ENST00000395194 GPR158Q5T848 1215 aa20.84■□□□□ 0.93
COL11A2-204ENST00000395194 GAREM2Q75VX8 874 aa20.84■□□□□ 0.93
COL11A2-204ENST00000395194 DNAJB7Q7Z6W7 309 aaPredicted RBP20.84■□□□□ 0.93
COL11A2-204ENST00000395194 ARID3BQ8IVW6 561 aaPredicted RBP20.84■□□□□ 0.93
COL11A2-204ENST00000395194 CD302Q8IX05 232 aa20.84■□□□□ 0.93
COL11A2-204ENST00000395194 KRI1Q8N9T8 703 aaKnown RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms