RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 KCNV1Q6PIU1 500 aa6.34□□□□□ -1.4
CASC3-202ENST00000394114 METTL13Q8N6R0 699 aa6.34□□□□□ -1.4
CASC3-202ENST00000394114 PJA1Q8NG27 643 aa6.34□□□□□ -1.4
CASC3-202ENST00000394114 GOLGA5Q8TBA6 731 aa6.34□□□□□ -1.4
CASC3-202ENST00000394114 RNF217Q8TC41 542 aa6.34□□□□□ -1.4
CASC3-202ENST00000394114 PRPF31Q8WWY3 499 aaKnown RBP6.34□□□□□ -1.4
CASC3-202ENST00000394114 ELMO3Q96BJ8 720 aa6.34□□□□□ -1.4
CASC3-202ENST00000394114 BORCS6Q96GS4 357 aa6.34□□□□□ -1.4
CASC3-202ENST00000394114 RNPEPQ9H4A4 650 aa6.34□□□□□ -1.4
CASC3-202ENST00000394114 DHX33Q9H6R0 707 aaKnown RBP6.34□□□□□ -1.4
CASC3-202ENST00000394114 DNAI1Q9UI46 699 aa6.34□□□□□ -1.4
CASC3-202ENST00000394114 PCDHB5Q9Y5E4 795 aa6.34□□□□□ -1.4
CASC3-202ENST00000394114 EPN1Q9Y6I3 576 aaPredicted RBP6.34□□□□□ -1.4
CASC3-202ENST00000394114 VSTM5A8MXK1 200 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 FANCGO15287 622 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 XYLBO75191 536 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 TCEA3O75764 348 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 NDUFA10O95299 355 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 ADRB2P07550 413 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 MYL3P08590 195 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 ARAFP10398 606 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 ZSCAN20P17040 1043 aaPredicted RBP6.33□□□□□ -1.4
CASC3-202ENST00000394114 PON1P27169 355 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 MAPK4P31152 587 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 L1CAMP32004 1257 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 CYP2C19P33261 490 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 GCLMP48507 274 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 NEK3P51956 506 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 ALCAMQ13740 583 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 MYBPC2Q14324 1141 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 TDRD12Q587J7 1177 aaKnown RBP6.33□□□□□ -1.4
CASC3-202ENST00000394114 CXorf57Q6NSI4 855 aaKnown RBP6.33□□□□□ -1.4
CASC3-202ENST00000394114 CCNJLQ8IV13 435 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 MAP4K3Q8IVH8 894 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 PPM1KQ8N3J5 372 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 CEP120Q8N960 986 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 XXYLT1Q8NBI6 393 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 DEPTORQ8TB45 409 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 JPH3Q8WXH2 748 aaPredicted RBP6.33□□□□□ -1.4
CASC3-202ENST00000394114 POMGNT1Q8WZA1 660 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 DDX1Q92499 740 aaKnown RBP6.33□□□□□ -1.4
CASC3-202ENST00000394114 POP1Q99575 1024 aaKnown RBP6.33□□□□□ -1.4
CASC3-202ENST00000394114 EPN3Q9H201 632 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 NHEJ1Q9H9Q4 299 aaPredicted RBP6.33□□□□□ -1.4
CASC3-202ENST00000394114 DMAC2Q9NW81 257 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 ARHGAP20Q9P2F6 1191 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 ANKFY1Q9P2R3 1169 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 TRIM10Q9UDY6 481 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 KLF15Q9UIH9 416 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 AJAP1Q9UKB5 411 aaPredicted RBP6.33□□□□□ -1.4
CASC3-202ENST00000394114 SPEF1Q9Y4P9 236 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 FHOD1Q9Y613 1164 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 A0A1W2PQJ5 194 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 MANSC4A6NHS7 340 aaPredicted RBP6.33□□□□□ -1.4
CASC3-202ENST00000394114 GOLGA8CPA6NN73 597 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 ZSWIM8A7E2V4 1837 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 ZBTB42B2RXF5 422 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 GABRDO14764 452 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 CSDE1O75534 798 aaKnown RBP6.33□□□□□ -1.4
CASC3-202ENST00000394114 S1PR4O95977 384 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 EDN1P05305 212 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 KRT13P13646 458 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 SMPD1P17405 629 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 MYH10P35580 1976 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 MATR3P43243 847 aaKnown RBP eCLIP6.33□□□□□ -1.46e-7■□□□□ 8.4
CASC3-202ENST00000394114 FMO5P49326 533 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 CLCN3P51790 818 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 GNG11P61952 73 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 BFSP1Q12934 665 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 STRN3Q13033 797 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 CRHR2Q13324 411 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 ACVR2BQ13705 512 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 CAPSQ13938 189 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 TARBP2Q15633 366 aaKnown RBP6.33□□□□□ -1.4
CASC3-202ENST00000394114 SNRNP35Q16560 246 aaKnown RBP6.33□□□□□ -1.4
CASC3-202ENST00000394114 FIGNQ5HY92 759 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 CYP4F22Q6NT55 531 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 ADGRD1Q6QNK2 874 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 MAMDC4Q6UXC1 1216 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 GBP6Q6ZN66 633 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 EMSYQ7Z589 1322 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 TEX19Q8NA77 164 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 PLEKHO2Q8TD55 490 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 AFAP1L1Q8TED9 768 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 ATP8B4Q8TF62 1192 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 ZBTB45Q96K62 511 aaPredicted RBP6.33□□□□□ -1.4
CASC3-202ENST00000394114 KATNBL1Q9H079 304 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 ST6GALNAC4Q9H4F1 302 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 VTA1Q9NP79 307 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 PGPEP1Q9NXJ5 209 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 ZDHHC3Q9NYG2 299 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 FLRT1Q9NZU1 646 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 PLAGL2Q9UPG8 496 aa6.33□□□□□ -1.4
CASC3-202ENST00000394114 DIS3Q9Y2L1 958 aaKnown RBP6.33□□□□□ -1.4
CASC3-202ENST00000394114 REXO2Q9Y3B8 237 aaKnown RBP6.33□□□□□ -1.4
CASC3-202ENST00000394114 PASKQ96RG2 1323 aa6.32□□□□□ -1.4
CASC3-202ENST00000394114 K7ERI5 159 aa6.32□□□□□ -1.4
CASC3-202ENST00000394114 KHNYNO15037 678 aaKnown RBP6.32□□□□□ -1.4
CASC3-202ENST00000394114 CCP110O43303 1012 aa6.32□□□□□ -1.4
CASC3-202ENST00000394114 TLR2O60603 784 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms